RNA–Protein interactions for RNA: ENST00000514305.5

USP53-208, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-208ENST00000514305 ATG12O94817 140 aa16.06■□□□□ 0.16
USP53-208ENST00000514305 HPRT1P00492 218 aa16.06■□□□□ 0.16
USP53-208ENST00000514305 RLN1P04808 185 aa16.06■□□□□ 0.16
USP53-208ENST00000514305 F2RP25116 425 aa16.06■□□□□ 0.16
USP53-208ENST00000514305 VMA21Q3ZAQ7 101 aa16.06■□□□□ 0.16
USP53-208ENST00000514305 TMEM177Q53S58 311 aa16.06■□□□□ 0.16
USP53-208ENST00000514305 TBC1D26Q86UD7 250 aa16.06■□□□□ 0.16
USP53-208ENST00000514305 TMEM219Q86XT9 240 aa16.06■□□□□ 0.16
USP53-208ENST00000514305 SGPP2Q8IWX5 399 aa16.06■□□□□ 0.16
USP53-208ENST00000514305 PRSS22Q9GZN4 317 aa16.06■□□□□ 0.16
USP53-208ENST00000514305 FAM240BA0A1B0GVZ2 78 aa16.05■□□□□ 0.16
USP53-208ENST00000514305 NBR2O15453 112 aa16.05■□□□□ 0.16
USP53-208ENST00000514305 CRYZL1O95825 349 aa16.05■□□□□ 0.16
USP53-208ENST00000514305 ANXA3P12429 323 aa16.05■□□□□ 0.16
USP53-208ENST00000514305 RPA2P15927 270 aa16.05■□□□□ 0.16
USP53-208ENST00000514305 PROK1P58294 105 aa16.05■□□□□ 0.16
USP53-208ENST00000514305 TAS2R31P59538 309 aa16.05■□□□□ 0.16
USP53-208ENST00000514305 RPL30P62888 115 aaKnown RBP16.05■□□□□ 0.16
USP53-208ENST00000514305 ASAH1Q13510 395 aa16.05■□□□□ 0.16
USP53-208ENST00000514305 PLGLAQ15195 96 aa16.05■□□□□ 0.16
USP53-208ENST00000514305 CCBE1Q6UXH8 406 aaPredicted RBP16.05■□□□□ 0.16
USP53-208ENST00000514305 Q6ZSV7 163 aa16.05■□□□□ 0.16
USP53-208ENST00000514305 Q8N6K4 173 aa16.05■□□□□ 0.16
USP53-208ENST00000514305 VSTM2AQ8TAG5 236 aa16.05■□□□□ 0.16
USP53-208ENST00000514305 HARBI1Q96MB7 349 aa16.05■□□□□ 0.16
USP53-208ENST00000514305 PLA2G10O15496 165 aa16.04■□□□□ 0.16
USP53-208ENST00000514305 CREBL2O60519 120 aaPredicted RBP16.04■□□□□ 0.16
USP53-208ENST00000514305 SERPINE2P07093 398 aa16.04■□□□□ 0.16
USP53-208ENST00000514305 KRTAP10-3P60369 221 aa16.04■□□□□ 0.16
USP53-208ENST00000514305 ARSJQ5FYB0 599 aaPredicted RBP16.04■□□□□ 0.16
USP53-208ENST00000514305 NPBQ8NG41 125 aa16.04■□□□□ 0.16
USP53-208ENST00000514305 C16orf95Q9H693 158 aa16.04■□□□□ 0.16
USP53-208ENST00000514305 PLEKHA2Q9HB19 425 aa16.04■□□□□ 0.16
USP53-208ENST00000514305 PALMDQ9NP74 551 aa16.04■□□□□ 0.16
USP53-208ENST00000514305 C3orf85A0A1B0GTC6 90 aa16.03■□□□□ 0.16
USP53-208ENST00000514305 NDUFB6O95139 128 aa16.03■□□□□ 0.16
USP53-208ENST00000514305 LINC00205P59089 165 aa16.03■□□□□ 0.16
USP53-208ENST00000514305 UBE2MP61081 183 aaKnown RBP16.03■□□□□ 0.16
USP53-208ENST00000514305 ERVK-16P61578 105 aa16.03■□□□□ 0.16
USP53-208ENST00000514305 DHODHQ02127 395 aa16.03■□□□□ 0.16
USP53-208ENST00000514305 OR2B11Q5JQS5 317 aa16.03■□□□□ 0.16
USP53-208ENST00000514305 CENPSQ8N2Z9 138 aa16.03■□□□□ 0.16
USP53-208ENST00000514305 ENKURQ8TC29 256 aa16.03■□□□□ 0.16
USP53-208ENST00000514305 RTBDNQ9BSG5 229 aaPredicted RBP16.03■□□□□ 0.16
USP53-208ENST00000514305 C5orf66Q9H5L9 145 aa16.03■□□□□ 0.16
USP53-208ENST00000514305 COMMD9Q9P000 198 aa16.03■□□□□ 0.16
USP53-208ENST00000514305 CMYA5Q8N3K9 4069 aa16.02■□□□□ 0.16
USP53-208ENST00000514305 H0Y980 276 aa16.02■□□□□ 0.16
USP53-208ENST00000514305 RRHO14718 337 aa16.02■□□□□ 0.16
USP53-208ENST00000514305 NDUFA3O95167 84 aa16.02■□□□□ 0.16
USP53-208ENST00000514305 IGKV1-16P04430 117 aa16.02■□□□□ 0.16
USP53-208ENST00000514305 NQO2P16083 231 aa16.02■□□□□ 0.16
USP53-208ENST00000514305 PI3P19957 117 aa16.02■□□□□ 0.16
USP53-208ENST00000514305 CCR6P51684 374 aa16.02■□□□□ 0.16
USP53-208ENST00000514305 TMEM128Q5BJH2 165 aa16.02■□□□□ 0.16
USP53-208ENST00000514305 TMED4Q7Z7H5 227 aa16.02■□□□□ 0.16
USP53-208ENST00000514305 TEX45Q8NA69 505 aa16.02■□□□□ 0.16
USP53-208ENST00000514305 MRGPRFQ96AM1 343 aa16.02■□□□□ 0.16
USP53-208ENST00000514305 NAA60Q9H7X0 242 aa16.02■□□□□ 0.16
USP53-208ENST00000514305 WNK1Q9H4A3 2382 aa16.02■□□□□ 0.15
USP53-208ENST00000514305 PEX14O75381 377 aa16.01■□□□□ 0.15
USP53-208ENST00000514305 TSPAN9O75954 239 aa16.01■□□□□ 0.15
USP53-208ENST00000514305 AKR1C4P17516 323 aa16.01■□□□□ 0.15
USP53-208ENST00000514305 SLC6A1P30531 599 aa16.01■□□□□ 0.15
USP53-208ENST00000514305 LIN54Q6MZP7 749 aa16.01■□□□□ 0.15
USP53-208ENST00000514305 C5orf56Q8N8D9 126 aa16.01■□□□□ 0.15
USP53-208ENST00000514305 OR2T6Q8NHC8 308 aa16.01■□□□□ 0.15
USP53-208ENST00000514305 GPHA2Q96T91 129 aa16.01■□□□□ 0.15
USP53-208ENST00000514305 VSIG4Q9Y279 399 aa16.01■□□□□ 0.15
USP53-208ENST00000514305 TET2Q6N021 2002 aaPredicted RBP16.01■□□□□ 0.15
USP53-208ENST00000514305 VWFP04275 2813 aa16■□□□□ 0.15
USP53-208ENST00000514305 CRYM-AS1A6NIL9 109 aa16■□□□□ 0.15
USP53-208ENST00000514305 CHST1O43916 411 aa16■□□□□ 0.15
USP53-208ENST00000514305 LPAR6P43657 344 aa16■□□□□ 0.15
USP53-208ENST00000514305 F2RL1P55085 397 aa16■□□□□ 0.15
USP53-208ENST00000514305 UBE2KP61086 200 aa16■□□□□ 0.15
USP53-208ENST00000514305 SRPXP78539 464 aa16■□□□□ 0.15
USP53-208ENST00000514305 PSG5Q15238 335 aa16■□□□□ 0.15
USP53-208ENST00000514305 C5orf64Q2M2E5 130 aa16■□□□□ 0.15
USP53-208ENST00000514305 Q8N9W7 124 aa16■□□□□ 0.15
USP53-208ENST00000514305 PLSCR3Q9NRY6 295 aa16■□□□□ 0.15
USP53-208ENST00000514305 METTL1Q9UBP6 276 aaKnown RBP16■□□□□ 0.15
USP53-208ENST00000514305 TCRBP04435 133 aa15.99■□□□□ 0.15
USP53-208ENST00000514305 C2orf68Q2NKX9 166 aa15.99■□□□□ 0.15
USP53-208ENST00000514305 TRIM16LQ309B1 348 aa15.99■□□□□ 0.15
USP53-208ENST00000514305 C9orf152Q5JTZ5 239 aa15.99■□□□□ 0.15
USP53-208ENST00000514305 FAM71E2Q8N5Q1 922 aa15.99■□□□□ 0.15
USP53-208ENST00000514305 DMBX1Q8NFW5 382 aa15.99■□□□□ 0.15
USP53-208ENST00000514305 OR4A5Q8NH83 315 aa15.99■□□□□ 0.15
USP53-208ENST00000514305 GALNT14Q96FL9 552 aa15.99■□□□□ 0.15
USP53-208ENST00000514305 TBC1D24Q9ULP9 559 aa15.99■□□□□ 0.15
USP53-208ENST00000514305 NUBP2Q9Y5Y2 271 aa15.99■□□□□ 0.15
USP53-208ENST00000514305 SLC25A17O43808 307 aa15.98■□□□□ 0.15
USP53-208ENST00000514305 ACTL6BO94805 426 aa15.98■□□□□ 0.15
USP53-208ENST00000514305 OR2A4O95047 310 aa15.98■□□□□ 0.15
USP53-208ENST00000514305 SLC25A42Q86VD7 318 aa15.98■□□□□ 0.15
USP53-208ENST00000514305 PPP1R27Q86WC6 154 aa15.98■□□□□ 0.15
USP53-208ENST00000514305 FOXRED2Q8IWF2 684 aa15.98■□□□□ 0.15
USP53-208ENST00000514305 CADM3Q8N126 398 aa15.98■□□□□ 0.15
USP53-208ENST00000514305 RHOVQ96L33 236 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms