RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 PMS2P5A8MQ11 134 aa12.21□□□□□ -0.46
VCAN-211ENST00000513984 J3QR06 171 aa12.21□□□□□ -0.46
VCAN-211ENST00000513984 C1QL1O75973 258 aa12.21□□□□□ -0.46
VCAN-211ENST00000513984 HRASP01112 189 aa12.21□□□□□ -0.46
VCAN-211ENST00000513984 OR8U8P0C7N1 319 aa12.21□□□□□ -0.46
VCAN-211ENST00000513984 IGHV1-8P0DP01 117 aa12.21□□□□□ -0.46
VCAN-211ENST00000513984 ZNF137PP52743 207 aa12.21□□□□□ -0.46
VCAN-211ENST00000513984 SLC38A11Q08AI6 406 aa12.21□□□□□ -0.46
VCAN-211ENST00000513984 RTL8BQ17RB0 113 aa12.21□□□□□ -0.46
VCAN-211ENST00000513984 LILRB2Q8N423 598 aa12.21□□□□□ -0.46
VCAN-211ENST00000513984 SLC35D1Q9NTN3 355 aa12.21□□□□□ -0.46
VCAN-211ENST00000513984 NUP50Q9UKX7 468 aa12.21□□□□□ -0.46
VCAN-211ENST00000513984 RFNGQ9Y644 331 aa12.21□□□□□ -0.46
VCAN-211ENST00000513984 C15orf61A6NNL5 157 aa12.2□□□□□ -0.46
VCAN-211ENST00000513984 PRH1P02810 166 aa12.2□□□□□ -0.46
VCAN-211ENST00000513984 ARG1P05089 322 aa12.2□□□□□ -0.46
VCAN-211ENST00000513984 IGFBP2P18065 325 aa12.2□□□□□ -0.46
VCAN-211ENST00000513984 FHITP49789 147 aa12.2□□□□□ -0.46
VCAN-211ENST00000513984 ZNF616Q08AN1 781 aa12.2□□□□□ -0.46
VCAN-211ENST00000513984 AVPI1Q5T686 147 aa12.2□□□□□ -0.46
VCAN-211ENST00000513984 OR4A47Q6IF82 309 aa12.2□□□□□ -0.46
VCAN-211ENST00000513984 COMMD1Q8N668 190 aa12.2□□□□□ -0.46
VCAN-211ENST00000513984 C8orf46Q8TAG6 207 aa12.2□□□□□ -0.46
VCAN-211ENST00000513984 TMEM186Q96B77 213 aa12.2□□□□□ -0.46
VCAN-211ENST00000513984 MIOXQ9UGB7 285 aa12.2□□□□□ -0.46
VCAN-211ENST00000513984 LRBAP50851 2863 aa12.19□□□□□ -0.46
VCAN-211ENST00000513984 TRAV3A0A0B4J244 114 aa12.19□□□□□ -0.46
VCAN-211ENST00000513984 SCAF4O95104 1147 aaKnown RBP12.19□□□□□ -0.46
VCAN-211ENST00000513984 IFNA17P01571 189 aa12.19□□□□□ -0.46
VCAN-211ENST00000513984 IL6RP08887 468 aaPredicted RBP12.19□□□□□ -0.46
VCAN-211ENST00000513984 TAGLNQ01995 201 aaKnown RBP12.19□□□□□ -0.46
VCAN-211ENST00000513984 ATP6V1FQ16864 119 aa12.19□□□□□ -0.46
VCAN-211ENST00000513984 LRRC75BQ2VPJ9 315 aa12.19□□□□□ -0.46
VCAN-211ENST00000513984 SPINK9Q5DT21 86 aa12.19□□□□□ -0.46
VCAN-211ENST00000513984 SLC25A24Q6NUK1 477 aa12.19□□□□□ -0.46
VCAN-211ENST00000513984 OR8B3Q8NGG8 313 aa12.19□□□□□ -0.46
VCAN-211ENST00000513984 OR9G1Q8NH87 305 aa12.19□□□□□ -0.46
VCAN-211ENST00000513984 ST6GALNAC6Q969X2 333 aa12.19□□□□□ -0.46
VCAN-211ENST00000513984 TIMD4Q96H15 378 aa12.19□□□□□ -0.46
VCAN-211ENST00000513984 OR8B2Q96RD0 313 aa12.19□□□□□ -0.46
VCAN-211ENST00000513984 MRPL20Q9BYC9 149 aaKnown RBP12.19□□□□□ -0.46
VCAN-211ENST00000513984 FOXA2Q9Y261 457 aaPredicted RBP12.19□□□□□ -0.46
VCAN-211ENST00000513984 TNCP24821 2201 aa12.19□□□□□ -0.46
VCAN-211ENST00000513984 TMEM218A2RU14 115 aa12.18□□□□□ -0.46
VCAN-211ENST00000513984 C19orf84I3L1E1 186 aa12.18□□□□□ -0.46
VCAN-211ENST00000513984 LY6HO94772 140 aa12.18□□□□□ -0.46
VCAN-211ENST00000513984 TSPAN15O95858 294 aa12.18□□□□□ -0.46
VCAN-211ENST00000513984 RBP4P02753 201 aa12.18□□□□□ -0.46
VCAN-211ENST00000513984 SRSF3P84103 164 aaKnown RBP12.18□□□□□ -0.46
VCAN-211ENST00000513984 OR8G2PQ6IF36 304 aa12.18□□□□□ -0.46
VCAN-211ENST00000513984 THNSL2Q86YJ6 484 aa12.18□□□□□ -0.46
VCAN-211ENST00000513984 OR5AN1Q8NGI8 311 aa12.18□□□□□ -0.46
VCAN-211ENST00000513984 OR13D1Q8NGV5 346 aa12.18□□□□□ -0.46
VCAN-211ENST00000513984 OR10X1Q8NGY0 326 aa12.18□□□□□ -0.46
VCAN-211ENST00000513984 FAM213BQ8TBF2 198 aa12.18□□□□□ -0.46
VCAN-211ENST00000513984 SCGB1C1Q8TD33 95 aa12.18□□□□□ -0.46
VCAN-211ENST00000513984 RAB1CQ92928 201 aa12.18□□□□□ -0.46
VCAN-211ENST00000513984 NEIL1Q96FI4 390 aaPredicted RBP12.18□□□□□ -0.46
VCAN-211ENST00000513984 NARS2Q96I59 477 aaKnown RBP12.18□□□□□ -0.46
VCAN-211ENST00000513984 PSMG3Q9BT73 122 aaPredicted RBP12.18□□□□□ -0.46
VCAN-211ENST00000513984 WDR61Q9GZS3 305 aaKnown RBP12.18□□□□□ -0.46
VCAN-211ENST00000513984 TMEM133Q9H2Q1 129 aa12.18□□□□□ -0.46
VCAN-211ENST00000513984 NARFLQ9H6Q4 476 aa12.18□□□□□ -0.46
VCAN-211ENST00000513984 TMEM14BQ9NUH8 114 aa12.18□□□□□ -0.46
VCAN-211ENST00000513984 C15orf62A8K5M9 175 aa12.18□□□□□ -0.46
VCAN-211ENST00000513984 H0YJW9 148 aa12.18□□□□□ -0.46
VCAN-211ENST00000513984 APOA2P02652 100 aa12.18□□□□□ -0.46
VCAN-211ENST00000513984 IGKV1-16P04430 117 aa12.18□□□□□ -0.46
VCAN-211ENST00000513984 VDAC2P45880 294 aaPredicted RBP12.18□□□□□ -0.46
VCAN-211ENST00000513984 AKR1C1Q04828 323 aa12.18□□□□□ -0.46
VCAN-211ENST00000513984 WDR25Q64LD2 544 aaPredicted RBP12.18□□□□□ -0.46
VCAN-211ENST00000513984 DPPA3Q6W0C5 159 aa12.18□□□□□ -0.46
VCAN-211ENST00000513984 ABHD12Q8N2K0 398 aa12.18□□□□□ -0.46
VCAN-211ENST00000513984 OSR1Q8TAX0 266 aaPredicted RBP12.18□□□□□ -0.46
VCAN-211ENST00000513984 TNFRSF14Q92956 283 aa12.18□□□□□ -0.46
VCAN-211ENST00000513984 PINX1Q96BK5 328 aaKnown RBP12.18□□□□□ -0.46
VCAN-211ENST00000513984 TCF19Q9Y242 345 aa12.18□□□□□ -0.46
VCAN-211ENST00000513984 A0A1W2PPH5 198 aa12.17□□□□□ -0.46
VCAN-211ENST00000513984 CD5P06127 495 aa12.17□□□□□ -0.46
VCAN-211ENST00000513984 SNCAP37840 140 aa12.17□□□□□ -0.46
VCAN-211ENST00000513984 GNB2P62879 340 aa12.17□□□□□ -0.46
VCAN-211ENST00000513984 AKR1C8PQ5T2L2 129 aa12.17□□□□□ -0.46
VCAN-211ENST00000513984 PUSL1Q8N0Z8 303 aaKnown RBP12.17□□□□□ -0.46
VCAN-211ENST00000513984 OR10P1Q8NGE3 313 aa12.17□□□□□ -0.46
VCAN-211ENST00000513984 CLCC1Q96S66 551 aa12.17□□□□□ -0.46
VCAN-211ENST00000513984 AIFM2Q9BRQ8 373 aa12.17□□□□□ -0.46
VCAN-211ENST00000513984 TMEM147Q9BVK8 224 aa12.17□□□□□ -0.46
VCAN-211ENST00000513984 HIPK2Q9H2X6 1198 aa12.17□□□□□ -0.46
VCAN-211ENST00000513984 CHODLQ9H9P2 273 aa12.17□□□□□ -0.46
VCAN-211ENST00000513984 DCHS2Q6V1P9 2916 aa12.17□□□□□ -0.46
VCAN-211ENST00000513984 SCO1O75880 301 aa12.16□□□□□ -0.46
VCAN-211ENST00000513984 RPP30P78346 268 aaKnown RBP12.16□□□□□ -0.46
VCAN-211ENST00000513984 VWC2Q2TAL6 325 aa12.16□□□□□ -0.46
VCAN-211ENST00000513984 TAF15Q92804 592 aaKnown RBP eCLIP12.16□□□□□ -0.46
VCAN-211ENST00000513984 NABP2Q9BQ15 211 aa12.16□□□□□ -0.46
VCAN-211ENST00000513984 RSG1Q9BU20 258 aa12.16□□□□□ -0.46
VCAN-211ENST00000513984 UQCC1Q9NVA1 299 aa12.16□□□□□ -0.46
VCAN-211ENST00000513984 IGSF10Q6WRI0 2623 aa12.16□□□□□ -0.46
VCAN-211ENST00000513984 PPIAL4CA0A0B4J2A2 164 aa12.16□□□□□ -0.46
VCAN-211ENST00000513984 UBE2L5PA0A1B0GUS4 154 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms