RNA–Protein interactions for RNA: ENST00000512632.5

LIMCH1-215, Transcript of LIM and calponin homology domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMCH1, Length 4,792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-215ENST00000512632 SLC31A2O15432 143 aa7.71□□□□□ -1.18
LIMCH1-215ENST00000512632 RBFOX2O43251 390 aaKnown RBP eCLIP7.71□□□□□ -1.18
LIMCH1-215ENST00000512632 EIF4EBP1Q13541 118 aaPredicted RBP7.71□□□□□ -1.18
LIMCH1-215ENST00000512632 PDLIM3Q53GG5 364 aaPredicted RBP7.71□□□□□ -1.18
LIMCH1-215ENST00000512632 ACTL10Q5JWF8 245 aa7.71□□□□□ -1.18
LIMCH1-215ENST00000512632 PEAR1Q5VY43 1037 aaPredicted RBP7.71□□□□□ -1.18
LIMCH1-215ENST00000512632 ACP7Q6ZNF0 438 aa7.71□□□□□ -1.18
LIMCH1-215ENST00000512632 LRP11Q86VZ4 500 aa7.71□□□□□ -1.18
LIMCH1-215ENST00000512632 ACY3Q96HD9 319 aa7.71□□□□□ -1.18
LIMCH1-215ENST00000512632 WDR83OSQ9Y284 106 aa7.71□□□□□ -1.18
LIMCH1-215ENST00000512632 TRAV3A0A0B4J244 114 aa7.7□□□□□ -1.18
LIMCH1-215ENST00000512632 IQCF6A8MYZ5 107 aa7.7□□□□□ -1.18
LIMCH1-215ENST00000512632 Q8N7P7 452 aa7.7□□□□□ -1.18
LIMCH1-215ENST00000512632 TAAR6Q96RI8 345 aa7.7□□□□□ -1.18
LIMCH1-215ENST00000512632 TRBV20OR9-2A0A075B6H5 130 aa7.7□□□□□ -1.18
LIMCH1-215ENST00000512632 GRIFINA4D1Z8 144 aa7.7□□□□□ -1.18
LIMCH1-215ENST00000512632 M0R1X1 148 aa7.7□□□□□ -1.18
LIMCH1-215ENST00000512632 GPR12P47775 334 aa7.7□□□□□ -1.18
LIMCH1-215ENST00000512632 PAX5Q02548 391 aa7.7□□□□□ -1.18
LIMCH1-215ENST00000512632 SSX2Q16385 188 aa7.7□□□□□ -1.18
LIMCH1-215ENST00000512632 DNLZQ5SXM8 178 aa7.7□□□□□ -1.18
LIMCH1-215ENST00000512632 WDR82Q6UXN9 313 aa7.7□□□□□ -1.18
LIMCH1-215ENST00000512632 TGIF2LXQ8IUE1 241 aa7.7□□□□□ -1.18
LIMCH1-215ENST00000512632 CISD2Q8N5K1 135 aaKnown RBP7.7□□□□□ -1.18
LIMCH1-215ENST00000512632 ATG101Q9BSB4 218 aa7.7□□□□□ -1.18
LIMCH1-215ENST00000512632 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.7□□□□□ -1.18
LIMCH1-215ENST00000512632 RPL39P5Q59GN2 51 aa7.7□□□□□ -1.18
LIMCH1-215ENST00000512632 MDS2Q8NDY4 140 aa7.7□□□□□ -1.18
LIMCH1-215ENST00000512632 TRIB1Q96RU8 372 aa7.7□□□□□ -1.18
LIMCH1-215ENST00000512632 DDA1Q9BW61 102 aa7.7□□□□□ -1.18
LIMCH1-215ENST00000512632 ASPMQ8IZT6 3477 aa7.7□□□□□ -1.18
LIMCH1-215ENST00000512632 ARL14EPLP0DKL9 152 aa7.7□□□□□ -1.18
LIMCH1-215ENST00000512632 OR4A16Q8NH70 328 aa7.7□□□□□ -1.18
LIMCH1-215ENST00000512632 LEAP2Q969E1 77 aa7.7□□□□□ -1.18
LIMCH1-215ENST00000512632 HINT2Q9BX68 163 aa7.7□□□□□ -1.18
LIMCH1-215ENST00000512632 TNFSF15O95150 251 aa7.69□□□□□ -1.18
LIMCH1-215ENST00000512632 VENTXO95231 258 aa7.69□□□□□ -1.18
LIMCH1-215ENST00000512632 SRP14P37108 136 aaKnown RBP7.69□□□□□ -1.18
LIMCH1-215ENST00000512632 GABRA6Q16445 453 aa7.69□□□□□ -1.18
LIMCH1-215ENST00000512632 LURAP1Q96LR2 239 aa7.69□□□□□ -1.18
LIMCH1-215ENST00000512632 IMMP2LQ96T52 175 aa7.69□□□□□ -1.18
LIMCH1-215ENST00000512632 MS4A5Q9H3V2 200 aa7.69□□□□□ -1.18
LIMCH1-215ENST00000512632 TNCP24821 2201 aa7.69□□□□□ -1.18
LIMCH1-215ENST00000512632 SCO2A0A1W2PP80 73 aa7.69□□□□□ -1.18
LIMCH1-215ENST00000512632 SPINT2O43291 252 aa7.69□□□□□ -1.18
LIMCH1-215ENST00000512632 GCGP01275 180 aa7.69□□□□□ -1.18
LIMCH1-215ENST00000512632 GCH1P30793 250 aa7.69□□□□□ -1.18
LIMCH1-215ENST00000512632 SSTP61278 116 aa7.69□□□□□ -1.18
LIMCH1-215ENST00000512632 NDUFAF3Q9BU61 184 aa7.69□□□□□ -1.18
LIMCH1-215ENST00000512632 DUSP13Q9UII6 198 aa7.69□□□□□ -1.18
LIMCH1-215ENST00000512632 ZNF705FA8MVS1 300 aaPredicted RBP7.69□□□□□ -1.18
LIMCH1-215ENST00000512632 MKRN2OSH3BPM6 223 aa7.69□□□□□ -1.18
LIMCH1-215ENST00000512632 ZNF705DP0CH99 300 aaPredicted RBP7.69□□□□□ -1.18
LIMCH1-215ENST00000512632 ZNF705BP0CI00 300 aaPredicted RBP7.69□□□□□ -1.18
LIMCH1-215ENST00000512632 TAS2R60P59551 318 aa7.69□□□□□ -1.18
LIMCH1-215ENST00000512632 UTF1Q5T230 341 aa7.69□□□□□ -1.18
LIMCH1-215ENST00000512632 TREML4Q6UXN2 200 aa7.69□□□□□ -1.18
LIMCH1-215ENST00000512632 CD177Q8N6Q3 437 aa7.69□□□□□ -1.18
LIMCH1-215ENST00000512632 LRRC29Q8WV35 223 aa7.69□□□□□ -1.18
LIMCH1-215ENST00000512632 HSD17B10Q99714 261 aaKnown RBP7.69□□□□□ -1.18
LIMCH1-215ENST00000512632 HES4Q9HCC6 221 aa7.69□□□□□ -1.18
LIMCH1-215ENST00000512632 FKBP11Q9NYL4 201 aa7.69□□□□□ -1.18
LIMCH1-215ENST00000512632 TECTAO75443 2155 aa7.69□□□□□ -1.18
LIMCH1-215ENST00000512632 IGHV3OR15-7A0A075B7D8 119 aa7.68□□□□□ -1.18
LIMCH1-215ENST00000512632 MDFIC2A0A1B0GVS7 189 aa7.68□□□□□ -1.18
LIMCH1-215ENST00000512632 LNP1A1A4G5 178 aa7.68□□□□□ -1.18
LIMCH1-215ENST00000512632 C21orf140B9A014 251 aa7.68□□□□□ -1.18
LIMCH1-215ENST00000512632 EREGO14944 169 aa7.68□□□□□ -1.18
LIMCH1-215ENST00000512632 KITLGP21583 273 aa7.68□□□□□ -1.18
LIMCH1-215ENST00000512632 DUTP33316 252 aaKnown RBP7.68□□□□□ -1.18
LIMCH1-215ENST00000512632 OCC1Q8TAD7 63 aa7.68□□□□□ -1.18
LIMCH1-215ENST00000512632 CXXC4Q9H2H0 198 aa7.68□□□□□ -1.18
LIMCH1-215ENST00000512632 CBLN4Q9NTU7 201 aa7.68□□□□□ -1.18
LIMCH1-215ENST00000512632 PXMP4Q9Y6I8 212 aa7.68□□□□□ -1.18
LIMCH1-215ENST00000512632 PCNX2A6NKB5 2137 aa7.68□□□□□ -1.18
LIMCH1-215ENST00000512632 GVINP1Q7Z2Y8 2422 aa7.68□□□□□ -1.18
LIMCH1-215ENST00000512632 TMEM210A6NLX4 147 aa7.68□□□□□ -1.18
LIMCH1-215ENST00000512632 SLC17A3O00476 420 aa7.68□□□□□ -1.18
LIMCH1-215ENST00000512632 VWC2Q2TAL6 325 aa7.68□□□□□ -1.18
LIMCH1-215ENST00000512632 VWA1Q6PCB0 445 aa7.68□□□□□ -1.18
LIMCH1-215ENST00000512632 TEX38Q6PEX7 206 aa7.68□□□□□ -1.18
LIMCH1-215ENST00000512632 Q8TCH9 128 aa7.68□□□□□ -1.18
LIMCH1-215ENST00000512632 TNRC6BQ9UPQ9 1833 aaKnown RBP7.68□□□□□ -1.18
LIMCH1-215ENST00000512632 F6UZH7 168 aa7.68□□□□□ -1.18
LIMCH1-215ENST00000512632 TYMSP04818 313 aa7.68□□□□□ -1.18
LIMCH1-215ENST00000512632 SELLP14151 372 aa7.68□□□□□ -1.18
LIMCH1-215ENST00000512632 HOXC12P31275 282 aa7.68□□□□□ -1.18
LIMCH1-215ENST00000512632 PRDX2P32119 198 aa7.68□□□□□ -1.18
LIMCH1-215ENST00000512632 PDLIM4P50479 330 aa7.68□□□□□ -1.18
LIMCH1-215ENST00000512632 GMPPAQ96IJ6 420 aaPredicted RBP7.68□□□□□ -1.18
LIMCH1-215ENST00000512632 FER1L6-AS2Q96M78 137 aa7.68□□□□□ -1.18
LIMCH1-215ENST00000512632 RYDENQ9NUL5 291 aaKnown RBP7.68□□□□□ -1.18
LIMCH1-215ENST00000512632 PDE6DO43924 150 aa7.68□□□□□ -1.18
LIMCH1-215ENST00000512632 CBLN1P23435 193 aa7.68□□□□□ -1.18
LIMCH1-215ENST00000512632 SOX8P57073 446 aa7.68□□□□□ -1.18
LIMCH1-215ENST00000512632 SPATA31B1PQ5VZV4 182 aa7.68□□□□□ -1.18
LIMCH1-215ENST00000512632 GBGT1Q8N5D6 347 aa7.68□□□□□ -1.18
LIMCH1-215ENST00000512632 ZNRF1Q8ND25 227 aa7.68□□□□□ -1.18
LIMCH1-215ENST00000512632 SFRP2Q96HF1 295 aa7.68□□□□□ -1.18
LIMCH1-215ENST00000512632 MS4A10Q96PG2 267 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms