RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 FKBP11Q9NYL4 201 aa12.35□□□□□ -0.43
SCLT1-209ENST00000511426 BET1LQ9NYM9 111 aa12.35□□□□□ -0.43
SCLT1-209ENST00000511426 MINOS1-NBL1R4GNA1 71 aa12.35□□□□□ -0.43
SCLT1-209ENST00000511426 MALRD1Q5VYJ5 2156 aa12.35□□□□□ -0.43
SCLT1-209ENST00000511426 IL6RP08887 468 aaPredicted RBP12.35□□□□□ -0.43
SCLT1-209ENST00000511426 ZFP36P26651 326 aaKnown RBP12.35□□□□□ -0.43
SCLT1-209ENST00000511426 SPCS3P61009 180 aa12.35□□□□□ -0.43
SCLT1-209ENST00000511426 ST8SIA2Q92186 375 aa12.35□□□□□ -0.43
SCLT1-209ENST00000511426 SIRPDQ9H106 197 aa12.35□□□□□ -0.43
SCLT1-209ENST00000511426 DPM3Q9P2X0 92 aa12.35□□□□□ -0.43
SCLT1-209ENST00000511426 PRNDQ9UKY0 176 aa12.35□□□□□ -0.43
SCLT1-209ENST00000511426 FOXA2Q9Y261 457 aaPredicted RBP12.35□□□□□ -0.43
SCLT1-209ENST00000511426 ZNF257Q9Y2Q1 563 aa12.35□□□□□ -0.43
SCLT1-209ENST00000511426 FAM208BQ5VWN6 2430 aa12.34□□□□□ -0.43
SCLT1-209ENST00000511426 C15orf61A6NNL5 157 aa12.34□□□□□ -0.43
SCLT1-209ENST00000511426 LY6LH3BQJ8 138 aa12.34□□□□□ -0.43
SCLT1-209ENST00000511426 RBMXL2O75526 392 aaKnown RBP12.34□□□□□ -0.43
SCLT1-209ENST00000511426 CAV2P51636 162 aa12.34□□□□□ -0.43
SCLT1-209ENST00000511426 OR4A47Q6IF82 309 aa12.34□□□□□ -0.43
SCLT1-209ENST00000511426 EIF5AL1Q6IS14 154 aaKnown RBP12.34□□□□□ -0.43
SCLT1-209ENST00000511426 CCDC144NLQ6NUI1 221 aa12.34□□□□□ -0.43
SCLT1-209ENST00000511426 STX12Q86Y82 276 aa12.34□□□□□ -0.43
SCLT1-209ENST00000511426 STPG2Q8N412 459 aa12.34□□□□□ -0.43
SCLT1-209ENST00000511426 PNKDQ8N490 385 aa12.34□□□□□ -0.43
SCLT1-209ENST00000511426 TMEM252Q8N6L7 170 aa12.34□□□□□ -0.43
SCLT1-209ENST00000511426 SCARB1Q8WTV0 552 aa12.34□□□□□ -0.43
SCLT1-209ENST00000511426 PERPQ96FX8 193 aa12.34□□□□□ -0.43
SCLT1-209ENST00000511426 ZNRD1Q9P1U0 126 aa12.34□□□□□ -0.43
SCLT1-209ENST00000511426 INSIG2Q9Y5U4 225 aa12.34□□□□□ -0.43
SCLT1-209ENST00000511426 H7C2Y5 167 aa12.33□□□□□ -0.44
SCLT1-209ENST00000511426 SHOXO15266 292 aa12.33□□□□□ -0.44
SCLT1-209ENST00000511426 COX7A1P24310 79 aa12.33□□□□□ -0.44
SCLT1-209ENST00000511426 DVL1P1P54792 670 aaPredicted RBP12.33□□□□□ -0.44
SCLT1-209ENST00000511426 LCN2P80188 198 aa12.33□□□□□ -0.44
SCLT1-209ENST00000511426 RELBQ01201 579 aa12.33□□□□□ -0.44
SCLT1-209ENST00000511426 EWSR1Q01844 656 aaKnown RBP eCLIP12.33□□□□□ -0.44
SCLT1-209ENST00000511426 EXOSC2Q13868 293 aaKnown RBP12.33□□□□□ -0.44
SCLT1-209ENST00000511426 ZNF266Q14584 549 aa12.33□□□□□ -0.44
SCLT1-209ENST00000511426 IZUMO4Q1ZYL8 232 aa12.33□□□□□ -0.44
SCLT1-209ENST00000511426 MBD6Q96DN6 1003 aa12.33□□□□□ -0.44
SCLT1-209ENST00000511426 HARBI1Q96MB7 349 aa12.33□□□□□ -0.44
SCLT1-209ENST00000511426 PSMG3-AS1Q96PY0 264 aa12.33□□□□□ -0.44
SCLT1-209ENST00000511426 CLCC1Q96S66 551 aa12.33□□□□□ -0.44
SCLT1-209ENST00000511426 MAGT1Q9H0U3 335 aa12.33□□□□□ -0.44
SCLT1-209ENST00000511426 TBL2Q9Y4P3 447 aaKnown RBP12.33□□□□□ -0.44
SCLT1-209ENST00000511426 DOCK11Q5JSL3 2073 aa12.32□□□□□ -0.44
SCLT1-209ENST00000511426 YLPM1P49750 1951 aaKnown RBP12.32□□□□□ -0.44
SCLT1-209ENST00000511426 BORCS7-ASMTA0A0B4J1R7 106 aa12.32□□□□□ -0.44
SCLT1-209ENST00000511426 IGHV1-3A0A0C4DH29 117 aa12.32□□□□□ -0.44
SCLT1-209ENST00000511426 IGKV1-16P04430 117 aa12.32□□□□□ -0.44
SCLT1-209ENST00000511426 ARG1P05089 322 aa12.32□□□□□ -0.44
SCLT1-209ENST00000511426 OR9G9P0C7N8 305 aa12.32□□□□□ -0.44
SCLT1-209ENST00000511426 USF1P22415 310 aaPredicted RBP12.32□□□□□ -0.44
SCLT1-209ENST00000511426 PAX9P55771 341 aa12.32□□□□□ -0.44
SCLT1-209ENST00000511426 RPP30P78346 268 aaKnown RBP12.32□□□□□ -0.44
SCLT1-209ENST00000511426 TPTE2P1Q5T6R2 138 aa12.32□□□□□ -0.44
SCLT1-209ENST00000511426 VMO1Q7Z5L0 202 aa12.32□□□□□ -0.44
SCLT1-209ENST00000511426 BAP18Q8IXM2 172 aa12.32□□□□□ -0.44
SCLT1-209ENST00000511426 PUSL1Q8N0Z8 303 aaKnown RBP12.32□□□□□ -0.44
SCLT1-209ENST00000511426 UBAC2Q8NBM4 344 aa12.32□□□□□ -0.44
SCLT1-209ENST00000511426 LPAR2Q9HBW0 351 aa12.32□□□□□ -0.44
SCLT1-209ENST00000511426 SIRT7Q9NRC8 400 aa12.32□□□□□ -0.44
SCLT1-209ENST00000511426 CYTL1Q9NRR1 136 aa12.32□□□□□ -0.44
SCLT1-209ENST00000511426 TMEM14BQ9NUH8 114 aa12.32□□□□□ -0.44
SCLT1-209ENST00000511426 FBXL17Q9UF56 701 aa12.32□□□□□ -0.44
SCLT1-209ENST00000511426 MYO18BQ8IUG5 2567 aa12.32□□□□□ -0.44
SCLT1-209ENST00000511426 USF3Q68DE3 2245 aa12.32□□□□□ -0.44
SCLT1-209ENST00000511426 IGHV4-61A0A0C4DH41 118 aa12.32□□□□□ -0.44
SCLT1-209ENST00000511426 TOX4O94842 621 aa12.32□□□□□ -0.44
SCLT1-209ENST00000511426 GATA3P23771 443 aa12.32□□□□□ -0.44
SCLT1-209ENST00000511426 SULT1A1P50225 295 aa12.32□□□□□ -0.44
SCLT1-209ENST00000511426 UBE2E1P51965 193 aa12.32□□□□□ -0.44
SCLT1-209ENST00000511426 RAB14P61106 215 aa12.32□□□□□ -0.44
SCLT1-209ENST00000511426 HABP2Q14520 560 aaPredicted RBP12.32□□□□□ -0.44
SCLT1-209ENST00000511426 VMA21Q3ZAQ7 101 aa12.32□□□□□ -0.44
SCLT1-209ENST00000511426 OR5B3Q8NH48 314 aa12.32□□□□□ -0.44
SCLT1-209ENST00000511426 DTD1Q8TEA8 209 aa12.32□□□□□ -0.44
SCLT1-209ENST00000511426 C1orf159Q96HA4 380 aa12.32□□□□□ -0.44
SCLT1-209ENST00000511426 MS4A7Q9GZW8 240 aaPredicted RBP12.32□□□□□ -0.44
SCLT1-209ENST00000511426 RBKSQ9H477 322 aa12.32□□□□□ -0.44
SCLT1-209ENST00000511426 PSENENQ9NZ42 101 aa12.32□□□□□ -0.44
SCLT1-209ENST00000511426 IGHV4-30-2A0A087WSY4 118 aa12.31□□□□□ -0.44
SCLT1-209ENST00000511426 UPK2O00526 184 aa12.31□□□□□ -0.44
SCLT1-209ENST00000511426 DFFBO76075 338 aa12.31□□□□□ -0.44
SCLT1-209ENST00000511426 SPDEFO95238 335 aa12.31□□□□□ -0.44
SCLT1-209ENST00000511426 TMEM50AO95807 157 aa12.31□□□□□ -0.44
SCLT1-209ENST00000511426 CD1BP29016 333 aa12.31□□□□□ -0.44
SCLT1-209ENST00000511426 REG1BP48304 166 aa12.31□□□□□ -0.44
SCLT1-209ENST00000511426 ATP5IP56385 69 aaPredicted RBP12.31□□□□□ -0.44
SCLT1-209ENST00000511426 HBG1P69891 147 aa12.31□□□□□ -0.44
SCLT1-209ENST00000511426 HBG2P69892 147 aa12.31□□□□□ -0.44
SCLT1-209ENST00000511426 CLEC12BQ2HXU8 276 aa12.31□□□□□ -0.44
SCLT1-209ENST00000511426 HCP5Q6MZN7 132 aa12.31□□□□□ -0.44
SCLT1-209ENST00000511426 SSX9Q7RTT3 188 aa12.31□□□□□ -0.44
SCLT1-209ENST00000511426 LRRC20Q8TCA0 184 aa12.31□□□□□ -0.44
SCLT1-209ENST00000511426 TSNAXQ99598 290 aaKnown RBP12.31□□□□□ -0.44
SCLT1-209ENST00000511426 FAM24AA6NFZ4 105 aa12.3□□□□□ -0.44
SCLT1-209ENST00000511426 KCNAB3O43448 404 aa12.3□□□□□ -0.44
SCLT1-209ENST00000511426 IFNA17P01571 189 aa12.3□□□□□ -0.44
SCLT1-209ENST00000511426 SAA1P0DJI8 122 aaPredicted RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms