RNA–Protein interactions for RNA: ENST00000511002.5

SH3TC1-220, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 5

Gene SH3TC1, Length 1,124 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-220ENST00000511002 KIAA1456Q9P272 454 aa12.29□□□□□ -0.44
SH3TC1-220ENST00000511002 VSIG4Q9Y279 399 aa12.29□□□□□ -0.44
SH3TC1-220ENST00000511002 PLXNB1O43157 2135 aa12.28□□□□□ -0.44
SH3TC1-220ENST00000511002 SRRM4A7MD48 611 aaKnown RBP12.28□□□□□ -0.44
SH3TC1-220ENST00000511002 PLA2G10O15496 165 aa12.28□□□□□ -0.44
SH3TC1-220ENST00000511002 KCNAB3O43448 404 aa12.28□□□□□ -0.44
SH3TC1-220ENST00000511002 SLC25A17O43808 307 aa12.28□□□□□ -0.44
SH3TC1-220ENST00000511002 BTCP35070 178 aa12.28□□□□□ -0.44
SH3TC1-220ENST00000511002 CCR6P51684 374 aa12.28□□□□□ -0.44
SH3TC1-220ENST00000511002 RND3P61587 244 aa12.28□□□□□ -0.44
SH3TC1-220ENST00000511002 SURF2Q15527 256 aaPredicted RBP12.28□□□□□ -0.44
SH3TC1-220ENST00000511002 C5orf64Q2M2E5 130 aa12.28□□□□□ -0.44
SH3TC1-220ENST00000511002 OSR1Q8TAX0 266 aaPredicted RBP12.28□□□□□ -0.44
SH3TC1-220ENST00000511002 ZFAND1Q8TCF1 268 aa12.28□□□□□ -0.44
SH3TC1-220ENST00000511002 RNF5Q99942 180 aa12.28□□□□□ -0.44
SH3TC1-220ENST00000511002 RASL11BQ9BPW5 248 aa12.28□□□□□ -0.44
SH3TC1-220ENST00000511002 HSPB9Q9BQS6 159 aa12.28□□□□□ -0.44
SH3TC1-220ENST00000511002 RTBDNQ9BSG5 229 aaPredicted RBP12.28□□□□□ -0.44
SH3TC1-220ENST00000511002 C5orf66Q9H5L9 145 aa12.28□□□□□ -0.44
SH3TC1-220ENST00000511002 METTL1Q9UBP6 276 aaKnown RBP12.28□□□□□ -0.44
SH3TC1-220ENST00000511002 C14orf166Q9Y224 244 aaKnown RBP12.28□□□□□ -0.44
SH3TC1-220ENST00000511002 VWFP04275 2813 aa12.27□□□□□ -0.44
SH3TC1-220ENST00000511002 MPPED1O15442 326 aa12.27□□□□□ -0.45
SH3TC1-220ENST00000511002 RBFOX2O43251 390 aaKnown RBP eCLIP12.27□□□□□ -0.452e-19■■■■■ 36.3
SH3TC1-220ENST00000511002 WIPF1O43516 503 aa12.27□□□□□ -0.45
SH3TC1-220ENST00000511002 S1PR2O95136 353 aa12.27□□□□□ -0.45
SH3TC1-220ENST00000511002 SPDEFO95238 335 aa12.27□□□□□ -0.45
SH3TC1-220ENST00000511002 F2RP25116 425 aa12.27□□□□□ -0.45
SH3TC1-220ENST00000511002 S100GP29377 79 aa12.27□□□□□ -0.45
SH3TC1-220ENST00000511002 VDAC2P45880 294 aaPredicted RBP12.27□□□□□ -0.45
SH3TC1-220ENST00000511002 C10orf99Q6UWK7 81 aa12.27□□□□□ -0.45
SH3TC1-220ENST00000511002 VKORC1L1Q8N0U8 176 aa12.27□□□□□ -0.45
SH3TC1-220ENST00000511002 COPZ2Q9P299 210 aa12.27□□□□□ -0.45
SH3TC1-220ENST00000511002 GPR132Q9UNW8 380 aa12.27□□□□□ -0.45
SH3TC1-220ENST00000511002 NAP1L6A6NFF2 107 aa12.26□□□□□ -0.45
SH3TC1-220ENST00000511002 LINC01548A6NM66 108 aa12.26□□□□□ -0.45
SH3TC1-220ENST00000511002 ADARB2-AS1A8MUL3 147 aa12.26□□□□□ -0.45
SH3TC1-220ENST00000511002 FBXO24O75426 580 aa12.26□□□□□ -0.45
SH3TC1-220ENST00000511002 UPK1BO75841 260 aa12.26□□□□□ -0.45
SH3TC1-220ENST00000511002 CRYGBP07316 175 aa12.26□□□□□ -0.45
SH3TC1-220ENST00000511002 SAA1P0DJI8 122 aaPredicted RBP12.26□□□□□ -0.45
SH3TC1-220ENST00000511002 LGALS7P47929 136 aa12.26□□□□□ -0.45
SH3TC1-220ENST00000511002 IFITM3Q01628 133 aa12.26□□□□□ -0.45
SH3TC1-220ENST00000511002 PLGLAQ15195 96 aa12.26□□□□□ -0.45
SH3TC1-220ENST00000511002 C2orf68Q2NKX9 166 aa12.26□□□□□ -0.45
SH3TC1-220ENST00000511002 ZNF585BQ52M93 769 aa12.26□□□□□ -0.45
SH3TC1-220ENST00000511002 ARSJQ5FYB0 599 aaPredicted RBP12.26□□□□□ -0.45
SH3TC1-220ENST00000511002 CCDC71LQ8N9Z2 235 aa12.26□□□□□ -0.45
SH3TC1-220ENST00000511002 POC5Q8NA72 575 aa12.26□□□□□ -0.45
SH3TC1-220ENST00000511002 ADAD2Q8NCV1 583 aaKnown RBP12.26□□□□□ -0.45
SH3TC1-220ENST00000511002 CLCC1Q96S66 551 aa12.26□□□□□ -0.45
SH3TC1-220ENST00000511002 CITED2Q99967 270 aaPredicted RBP12.26□□□□□ -0.45
SH3TC1-220ENST00000511002 C7orf50Q9BRJ6 194 aaKnown RBP12.26□□□□□ -0.45
SH3TC1-220ENST00000511002 TBC1D24Q9ULP9 559 aa12.26□□□□□ -0.45
SH3TC1-220ENST00000511002 CENPXA8MT69 81 aa12.25□□□□□ -0.45
SH3TC1-220ENST00000511002 FCN1O00602 326 aa12.25□□□□□ -0.45
SH3TC1-220ENST00000511002 LYRM1O43325 122 aa12.25□□□□□ -0.45
SH3TC1-220ENST00000511002 HLA-DRB1P01911 266 aa12.25□□□□□ -0.45
SH3TC1-220ENST00000511002 LPAR6P43657 344 aa12.25□□□□□ -0.45
SH3TC1-220ENST00000511002 UBE2KP61086 200 aa12.25□□□□□ -0.45
SH3TC1-220ENST00000511002 LIN54Q6MZP7 749 aa12.25□□□□□ -0.45
SH3TC1-220ENST00000511002 CD300LFQ8TDQ1 290 aa12.25□□□□□ -0.45
SH3TC1-220ENST00000511002 TMEM230Q96A57 120 aa12.25□□□□□ -0.45
SH3TC1-220ENST00000511002 TP53RKQ96S44 253 aa12.25□□□□□ -0.45
SH3TC1-220ENST00000511002 CRYM-AS1A6NIL9 109 aa12.24□□□□□ -0.45
SH3TC1-220ENST00000511002 H0Y980 276 aa12.24□□□□□ -0.45
SH3TC1-220ENST00000511002 HPRT1P00492 218 aa12.24□□□□□ -0.45
SH3TC1-220ENST00000511002 CA2P00918 260 aa12.24□□□□□ -0.45
SH3TC1-220ENST00000511002 IGHG2P01859 326 aa12.24□□□□□ -0.45
SH3TC1-220ENST00000511002 RPA2P15927 270 aa12.24□□□□□ -0.45
SH3TC1-220ENST00000511002 TNCP24821 2201 aa12.24□□□□□ -0.45
SH3TC1-220ENST00000511002 NDPQ00604 133 aa12.24□□□□□ -0.45
SH3TC1-220ENST00000511002 PJVKQ0ZLH3 352 aa12.24□□□□□ -0.45
SH3TC1-220ENST00000511002 RBMS2Q15434 407 aaKnown RBP12.24□□□□□ -0.45
SH3TC1-220ENST00000511002 MRGPRG-AS1Q2M3A8 158 aa12.24□□□□□ -0.45
SH3TC1-220ENST00000511002 NSUN5P1Q3KNT7 163 aa12.24□□□□□ -0.45
SH3TC1-220ENST00000511002 VMA21Q3ZAQ7 101 aa12.24□□□□□ -0.45
SH3TC1-220ENST00000511002 TCTEX1D4Q5JR98 221 aa12.24□□□□□ -0.45
SH3TC1-220ENST00000511002 SSX9Q7RTT3 188 aa12.24□□□□□ -0.45
SH3TC1-220ENST00000511002 SLC35E3Q7Z769 313 aa12.24□□□□□ -0.45
SH3TC1-220ENST00000511002 TMED4Q7Z7H5 227 aa12.24□□□□□ -0.45
SH3TC1-220ENST00000511002 C1QL4Q86Z23 238 aa12.24□□□□□ -0.45
SH3TC1-220ENST00000511002 SCGB3A2Q96PL1 93 aa12.24□□□□□ -0.45
SH3TC1-220ENST00000511002 SLC25A21Q9BQT8 299 aaPredicted RBP12.24□□□□□ -0.45
SH3TC1-220ENST00000511002 NAA60Q9H7X0 242 aa12.24□□□□□ -0.45
SH3TC1-220ENST00000511002 PLEKHA2Q9HB19 425 aa12.24□□□□□ -0.45
SH3TC1-220ENST00000511002 COMMD9Q9P000 198 aa12.24□□□□□ -0.45
SH3TC1-220ENST00000511002 IGHV7-81A0A0B4J1V7 117 aa12.23□□□□□ -0.45
SH3TC1-220ENST00000511002 C3orf85A0A1B0GTC6 90 aa12.23□□□□□ -0.45
SH3TC1-220ENST00000511002 NDUFB6O95139 128 aa12.23□□□□□ -0.45
SH3TC1-220ENST00000511002 IGKV1-39P01597 117 aa12.23□□□□□ -0.45
SH3TC1-220ENST00000511002 IGKV1D-39P04432 117 aa12.23□□□□□ -0.45
SH3TC1-220ENST00000511002 AKR1C4P17516 323 aa12.23□□□□□ -0.45
SH3TC1-220ENST00000511002 TAS2R31P59538 309 aa12.23□□□□□ -0.45
SH3TC1-220ENST00000511002 DEFA6Q01524 100 aa12.23□□□□□ -0.45
SH3TC1-220ENST00000511002 ASAH1Q13510 395 aa12.23□□□□□ -0.45
SH3TC1-220ENST00000511002 SP6Q3SY56 376 aa12.23□□□□□ -0.45
SH3TC1-220ENST00000511002 PPP1R27Q86WC6 154 aa12.23□□□□□ -0.45
SH3TC1-220ENST00000511002 PUSL1Q8N0Z8 303 aaKnown RBP12.23□□□□□ -0.45
SH3TC1-220ENST00000511002 TCTEX1D1Q8N7M0 179 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms