RNA–Protein interactions for RNA: ENST00000509857.5

TRAPPC11-206, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-206ENST00000509857 ZNF230Q9UIE0 474 aaPredicted RBP5.46□□□□□ -1.54
TRAPPC11-206ENST00000509857 NSG2Q9Y328 171 aa5.46□□□□□ -1.54
TRAPPC11-206ENST00000509857 CSAG2Q9Y5P2 127 aa5.46□□□□□ -1.54
TRAPPC11-206ENST00000509857 TMEM56-RWDD3S4R434 201 aa5.46□□□□□ -1.54
TRAPPC11-206ENST00000509857 USP34Q70CQ2 3546 aa5.46□□□□□ -1.54
TRAPPC11-206ENST00000509857 COL6A3P12111 3177 aa5.45□□□□□ -1.54
TRAPPC11-206ENST00000509857 IGHV4-30-2A0A087WSY4 118 aa5.45□□□□□ -1.54
TRAPPC11-206ENST00000509857 C13orf42A0A1B0GVH6 325 aa5.45□□□□□ -1.54
TRAPPC11-206ENST00000509857 MFSD2BA6NFX1 497 aa5.45□□□□□ -1.54
TRAPPC11-206ENST00000509857 OR5H1A6NKK0 313 aa5.45□□□□□ -1.54
TRAPPC11-206ENST00000509857 FAM25EA8MYX2 175 aa5.45□□□□□ -1.54
TRAPPC11-206ENST00000509857 EEF1E1-BLOC1S5C9J1V9 151 aa5.45□□□□□ -1.54
TRAPPC11-206ENST00000509857 TEX46H3BTG2 121 aa5.45□□□□□ -1.54
TRAPPC11-206ENST00000509857 SH2D1BO14796 132 aa5.45□□□□□ -1.54
TRAPPC11-206ENST00000509857 FGF16O43320 207 aa5.45□□□□□ -1.54
TRAPPC11-206ENST00000509857 DEDDO75618 318 aa5.45□□□□□ -1.54
TRAPPC11-206ENST00000509857 PTBP3O95758 552 aaKnown RBP5.45□□□□□ -1.54
TRAPPC11-206ENST00000509857 PRKACAP17612 351 aa5.45□□□□□ -1.54
TRAPPC11-206ENST00000509857 ZP3P21754 424 aa5.45□□□□□ -1.54
TRAPPC11-206ENST00000509857 UCP1P25874 307 aa5.45□□□□□ -1.54
TRAPPC11-206ENST00000509857 OPRM1P35372 400 aa5.45□□□□□ -1.54
TRAPPC11-206ENST00000509857 NPBWR2P48146 333 aa5.45□□□□□ -1.54
TRAPPC11-206ENST00000509857 HLA-DRB3P79483 266 aa5.45□□□□□ -1.54
TRAPPC11-206ENST00000509857 PAX8Q06710 450 aa5.45□□□□□ -1.54
TRAPPC11-206ENST00000509857 SLC9A3R2Q15599 337 aa5.45□□□□□ -1.54
TRAPPC11-206ENST00000509857 C3AR1Q16581 482 aa5.45□□□□□ -1.54
TRAPPC11-206ENST00000509857 AANATQ16613 207 aa5.45□□□□□ -1.54
TRAPPC11-206ENST00000509857 IAH1Q2TAA2 248 aaPredicted RBP5.45□□□□□ -1.54
TRAPPC11-206ENST00000509857 DEFB109BQ30KR1 87 aa5.45□□□□□ -1.54
TRAPPC11-206ENST00000509857 TIMM23BQ5SRD1 257 aa5.45□□□□□ -1.54
TRAPPC11-206ENST00000509857 C6orf183Q5T699 404 aa5.45□□□□□ -1.54
TRAPPC11-206ENST00000509857 C9orf135Q5VTT2 229 aa5.45□□□□□ -1.54
TRAPPC11-206ENST00000509857 HAGHLQ6PII5 290 aaPredicted RBP5.45□□□□□ -1.54
TRAPPC11-206ENST00000509857 COX8CQ7Z4L0 72 aa5.45□□□□□ -1.54
TRAPPC11-206ENST00000509857 LYG1Q8N1E2 194 aa5.45□□□□□ -1.54
TRAPPC11-206ENST00000509857 WDR31Q8NA23 367 aa5.45□□□□□ -1.54
TRAPPC11-206ENST00000509857 SUMF2Q8NBJ7 301 aa5.45□□□□□ -1.54
TRAPPC11-206ENST00000509857 OR10Z1Q8NGY1 313 aa5.45□□□□□ -1.54
TRAPPC11-206ENST00000509857 DCUN1D4Q92564 292 aa5.45□□□□□ -1.54
TRAPPC11-206ENST00000509857 SEC22AQ96IW7 307 aa5.45□□□□□ -1.54
TRAPPC11-206ENST00000509857 HDHD3Q9BSH5 251 aaPredicted RBP5.45□□□□□ -1.54
TRAPPC11-206ENST00000509857 ALKBH7Q9BT30 221 aaPredicted RBP5.45□□□□□ -1.54
TRAPPC11-206ENST00000509857 SFXN3Q9BWM7 321 aa5.45□□□□□ -1.54
TRAPPC11-206ENST00000509857 ZNF471Q9BX82 626 aaPredicted RBP5.45□□□□□ -1.54
TRAPPC11-206ENST00000509857 FGF23Q9GZV9 251 aaPredicted RBP5.45□□□□□ -1.54
TRAPPC11-206ENST00000509857 TMEM222Q9H0R3 208 aa5.45□□□□□ -1.54
TRAPPC11-206ENST00000509857 CXXC4Q9H2H0 198 aa5.45□□□□□ -1.54
TRAPPC11-206ENST00000509857 NCOR1P1Q9H4R4 102 aa5.45□□□□□ -1.54
TRAPPC11-206ENST00000509857 HES4Q9HCC6 221 aa5.45□□□□□ -1.54
TRAPPC11-206ENST00000509857 RAB9BQ9NP90 201 aa5.45□□□□□ -1.54
TRAPPC11-206ENST00000509857 TMEM100Q9NV29 134 aa5.45□□□□□ -1.54
TRAPPC11-206ENST00000509857 RDH8Q9NYR8 311 aa5.45□□□□□ -1.54
TRAPPC11-206ENST00000509857 URB1O60287 2271 aaKnown RBP5.45□□□□□ -1.54
TRAPPC11-206ENST00000509857 H0Y980 276 aa5.44□□□□□ -1.54
TRAPPC11-206ENST00000509857 MKRN2OSH3BPM6 223 aa5.44□□□□□ -1.54
TRAPPC11-206ENST00000509857 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.44□□□□□ -1.54
TRAPPC11-206ENST00000509857 I3L521 148 aa5.44□□□□□ -1.54
TRAPPC11-206ENST00000509857 CCSO14618 274 aa5.44□□□□□ -1.54
TRAPPC11-206ENST00000509857 TNFSF13O75888 250 aa5.44□□□□□ -1.54
TRAPPC11-206ENST00000509857 VDAC1P21796 283 aa5.44□□□□□ -1.54
TRAPPC11-206ENST00000509857 P2RY1P47900 373 aa5.44□□□□□ -1.54
TRAPPC11-206ENST00000509857 RAB5CP51148 216 aa5.44□□□□□ -1.54
TRAPPC11-206ENST00000509857 IDH3GP51553 393 aaPredicted RBP5.44□□□□□ -1.54
TRAPPC11-206ENST00000509857 DSCR10P59022 87 aa5.44□□□□□ -1.54
TRAPPC11-206ENST00000509857 RPS23P62266 143 aaKnown RBP5.44□□□□□ -1.54
TRAPPC11-206ENST00000509857 OR8G1Q15617 311 aa5.44□□□□□ -1.54
TRAPPC11-206ENST00000509857 OR2T2Q6IF00 324 aa5.44□□□□□ -1.54
TRAPPC11-206ENST00000509857 Q6P435 159 aa5.44□□□□□ -1.54
TRAPPC11-206ENST00000509857 ALKAL2Q6UX46 152 aa5.44□□□□□ -1.54
TRAPPC11-206ENST00000509857 BHLHA15Q7RTS1 189 aaPredicted RBP5.44□□□□□ -1.54
TRAPPC11-206ENST00000509857 H1FOOQ8IZA3 346 aaPredicted RBP5.44□□□□□ -1.54
TRAPPC11-206ENST00000509857 ZNF565Q8N9K5 539 aa5.44□□□□□ -1.54
TRAPPC11-206ENST00000509857 UBAC2Q8NBM4 344 aa5.44□□□□□ -1.54
TRAPPC11-206ENST00000509857 OR1S1Q8NH92 325 aa5.44□□□□□ -1.54
TRAPPC11-206ENST00000509857 MRPL30Q8TCC3 161 aaKnown RBP5.44□□□□□ -1.54
TRAPPC11-206ENST00000509857 KLF14Q8TD94 323 aaPredicted RBP5.44□□□□□ -1.54
TRAPPC11-206ENST00000509857 GLYATL2Q8WU03 294 aa5.44□□□□□ -1.54
TRAPPC11-206ENST00000509857 OR10C1Q96KK4 312 aa5.44□□□□□ -1.54
TRAPPC11-206ENST00000509857 ADAT1Q9BUB4 502 aaKnown RBP5.44□□□□□ -1.54
TRAPPC11-206ENST00000509857 REG4Q9BYZ8 158 aa5.44□□□□□ -1.54
TRAPPC11-206ENST00000509857 SLC5A7Q9GZV3 580 aa5.44□□□□□ -1.54
TRAPPC11-206ENST00000509857 TMEM165Q9HC07 324 aa5.44□□□□□ -1.54
TRAPPC11-206ENST00000509857 SDHAF2Q9NX18 166 aa5.44□□□□□ -1.54
TRAPPC11-206ENST00000509857 PURGQ9UJV8 347 aaKnown RBP5.44□□□□□ -1.54
TRAPPC11-206ENST00000509857 RIF1Q5UIP0 2472 aaKnown RBP5.43□□□□□ -1.54
TRAPPC11-206ENST00000509857 IGHV2OR16-5A0A0B4J2B6 119 aa5.43□□□□□ -1.54
TRAPPC11-206ENST00000509857 C3orf85A0A1B0GTC6 90 aa5.43□□□□□ -1.54
TRAPPC11-206ENST00000509857 RNF212BA8MTL3 300 aa5.43□□□□□ -1.54
TRAPPC11-206ENST00000509857 K7EPK0 472 aa5.43□□□□□ -1.54
TRAPPC11-206ENST00000509857 ST8SIA3O43173 380 aa5.43□□□□□ -1.54
TRAPPC11-206ENST00000509857 SYNGR1O43759 233 aa5.43□□□□□ -1.54
TRAPPC11-206ENST00000509857 ADAP1O75689 374 aa5.43□□□□□ -1.54
TRAPPC11-206ENST00000509857 OR5AC1P0C628 307 aa5.43□□□□□ -1.54
TRAPPC11-206ENST00000509857 CCL2P13500 99 aa5.43□□□□□ -1.54
TRAPPC11-206ENST00000509857 PVALBP20472 110 aaPredicted RBP5.43□□□□□ -1.54
TRAPPC11-206ENST00000509857 GNRHRP30968 328 aa5.43□□□□□ -1.54
TRAPPC11-206ENST00000509857 PSG7Q13046 419 aa5.43□□□□□ -1.54
TRAPPC11-206ENST00000509857 ZNF154Q13106 437 aa5.43□□□□□ -1.54
TRAPPC11-206ENST00000509857 GNMTQ14749 295 aa5.43□□□□□ -1.54
TRAPPC11-206ENST00000509857 HMGN3Q15651 99 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms