RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 SLC25A46Q96AG3 418 aa3.67□□□□□ -1.82
NIPBL-206ENST00000509429 TMEM18Q96B42 140 aa3.67□□□□□ -1.82
NIPBL-206ENST00000509429 STARD4Q96DR4 205 aa3.67□□□□□ -1.82
NIPBL-206ENST00000509429 OR4F4Q96R69 305 aa3.67□□□□□ -1.82
NIPBL-206ENST00000509429 NAA38Q9BRA0 125 aaKnown RBP3.67□□□□□ -1.82
NIPBL-206ENST00000509429 THTPAQ9BU02 230 aa3.67□□□□□ -1.82
NIPBL-206ENST00000509429 APOOQ9BUR5 198 aa3.67□□□□□ -1.82
NIPBL-206ENST00000509429 VAMP8Q9BV40 100 aa3.67□□□□□ -1.82
NIPBL-206ENST00000509429 SPANXDQ9BXN6 97 aa3.67□□□□□ -1.82
NIPBL-206ENST00000509429 FGFBP2Q9BYJ0 223 aa3.67□□□□□ -1.82
NIPBL-206ENST00000509429 RERGLQ9H628 205 aa3.67□□□□□ -1.82
NIPBL-206ENST00000509429 JPT2Q9H910 190 aa3.67□□□□□ -1.82
NIPBL-206ENST00000509429 RPRMQ9NS64 109 aa3.67□□□□□ -1.82
NIPBL-206ENST00000509429 CA10Q9NS85 328 aa3.67□□□□□ -1.82
NIPBL-206ENST00000509429 SERTAD4Q9NUC0 356 aa3.67□□□□□ -1.82
NIPBL-206ENST00000509429 FKBP11Q9NYL4 201 aa3.67□□□□□ -1.82
NIPBL-206ENST00000509429 ZNF226Q9NYT6 803 aa3.67□□□□□ -1.82
NIPBL-206ENST00000509429 UQCR10Q9UDW1 63 aa3.67□□□□□ -1.82
NIPBL-206ENST00000509429 ZNF443Q9Y2A4 671 aaPredicted RBP3.67□□□□□ -1.82
NIPBL-206ENST00000509429 ORC6Q9Y5N6 252 aa3.67□□□□□ -1.82
NIPBL-206ENST00000509429 INSIG2Q9Y5U4 225 aa3.67□□□□□ -1.82
NIPBL-206ENST00000509429 COL1A2P08123 1366 aa3.66□□□□□ -1.82
NIPBL-206ENST00000509429 OR2M5A3KFT3 312 aa3.66□□□□□ -1.82
NIPBL-206ENST00000509429 C7orf66A4D0T2 115 aa3.66□□□□□ -1.82
NIPBL-206ENST00000509429 C7orf71A4D174 169 aa3.66□□□□□ -1.82
NIPBL-206ENST00000509429 MEIS3P1A6NDR6 274 aa3.66□□□□□ -1.82
NIPBL-206ENST00000509429 CD300LBA8K4G0 201 aa3.66□□□□□ -1.82
NIPBL-206ENST00000509429 HMSDA8MTL9 139 aa3.66□□□□□ -1.82
NIPBL-206ENST00000509429 SULT2B1O00204 365 aa3.66□□□□□ -1.82
NIPBL-206ENST00000509429 CCL21O00585 134 aa3.66□□□□□ -1.82
NIPBL-206ENST00000509429 PRYO14603 147 aa3.66□□□□□ -1.82
NIPBL-206ENST00000509429 OVOL1O14753 267 aa3.66□□□□□ -1.82
NIPBL-206ENST00000509429 TAX1BP3O14907 124 aa3.66□□□□□ -1.82
NIPBL-206ENST00000509429 ARPC2O15144 300 aa3.66□□□□□ -1.82
NIPBL-206ENST00000509429 MRPS12O15235 138 aaKnown RBP3.66□□□□□ -1.82
NIPBL-206ENST00000509429 BCL2L11O43521 198 aa3.66□□□□□ -1.82
NIPBL-206ENST00000509429 SPRY3O43610 288 aa3.66□□□□□ -1.82
NIPBL-206ENST00000509429 HIST1H2BKO60814 126 aa3.66□□□□□ -1.82
NIPBL-206ENST00000509429 REM1O75628 298 aa3.66□□□□□ -1.82
NIPBL-206ENST00000509429 IGKV3-20P01619 116 aa3.66□□□□□ -1.82
NIPBL-206ENST00000509429 HIST1H2BJP06899 126 aa3.66□□□□□ -1.82
NIPBL-206ENST00000509429 PGA3P0DJD8 388 aa3.66□□□□□ -1.82
NIPBL-206ENST00000509429 CPMP14384 443 aa3.66□□□□□ -1.82
NIPBL-206ENST00000509429 MYOD1P15172 320 aa3.66□□□□□ -1.82
NIPBL-206ENST00000509429 CXCL2P19875 107 aa3.66□□□□□ -1.82
NIPBL-206ENST00000509429 HIST1H2BOP23527 126 aa3.66□□□□□ -1.82
NIPBL-206ENST00000509429 HIST1H2BBP33778 126 aa3.66□□□□□ -1.82
NIPBL-206ENST00000509429 CTRLP40313 264 aa3.66□□□□□ -1.82
NIPBL-206ENST00000509429 MARCKSL1P49006 195 aa3.66□□□□□ -1.82
NIPBL-206ENST00000509429 FABP6P51161 128 aa3.66□□□□□ -1.82
NIPBL-206ENST00000509429 ZNF83P51522 516 aa3.66□□□□□ -1.82
NIPBL-206ENST00000509429 HIST1H2BDP58876 126 aa3.66□□□□□ -1.82
NIPBL-206ENST00000509429 TPPP2P59282 170 aa3.66□□□□□ -1.82
NIPBL-206ENST00000509429 GABARAPL2P60520 117 aa3.66□□□□□ -1.82
NIPBL-206ENST00000509429 HIST1H2BCP62807 126 aa3.66□□□□□ -1.82
NIPBL-206ENST00000509429 ZNF92Q03936 586 aa3.66□□□□□ -1.82
NIPBL-206ENST00000509429 CATR1Q13166 79 aa3.66□□□□□ -1.82
NIPBL-206ENST00000509429 LAGE3Q14657 143 aa3.66□□□□□ -1.82
NIPBL-206ENST00000509429 HIST2H2BEQ16778 126 aa3.66□□□□□ -1.82
NIPBL-206ENST00000509429 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.66□□□□□ -1.82
NIPBL-206ENST00000509429 FAM201AQ5SY85 155 aa3.66□□□□□ -1.82
NIPBL-206ENST00000509429 IBA57Q5T440 356 aaKnown RBP3.66□□□□□ -1.82
NIPBL-206ENST00000509429 Q5XG85 94 aa3.66□□□□□ -1.82
NIPBL-206ENST00000509429 PARM1Q6UWI2 310 aa3.66□□□□□ -1.82
NIPBL-206ENST00000509429 TEX43Q6ZNM6 134 aa3.66□□□□□ -1.82
NIPBL-206ENST00000509429 ZNF550Q7Z398 422 aa3.66□□□□□ -1.82
NIPBL-206ENST00000509429 MRPL55Q7Z7F7 128 aaKnown RBP3.66□□□□□ -1.82
NIPBL-206ENST00000509429 C9orf40Q8IXQ3 194 aa3.66□□□□□ -1.82
NIPBL-206ENST00000509429 LRTM2Q8N967 370 aa3.66□□□□□ -1.82
NIPBL-206ENST00000509429 OR8B12Q8NGG6 310 aa3.66□□□□□ -1.82
NIPBL-206ENST00000509429 OR2A12Q8NGT7 310 aa3.66□□□□□ -1.82
NIPBL-206ENST00000509429 HIST1H2BHQ93079 126 aa3.66□□□□□ -1.82
NIPBL-206ENST00000509429 FMC1Q96HJ9 113 aa3.66□□□□□ -1.82
NIPBL-206ENST00000509429 C9orf85Q96MD7 179 aa3.66□□□□□ -1.82
NIPBL-206ENST00000509429 ZNF300Q96RE9 604 aaPredicted RBP3.66□□□□□ -1.82
NIPBL-206ENST00000509429 LINC01587Q99440 93 aa3.66□□□□□ -1.82
NIPBL-206ENST00000509429 SPIN2AQ99865 258 aa3.66□□□□□ -1.82
NIPBL-206ENST00000509429 HIST1H2BNQ99877 126 aa3.66□□□□□ -1.82
NIPBL-206ENST00000509429 HIST1H2BMQ99879 126 aa3.66□□□□□ -1.82
NIPBL-206ENST00000509429 SPIN2BQ9BPZ2 258 aa3.66□□□□□ -1.82
NIPBL-206ENST00000509429 MRPL45Q9BRJ2 306 aaKnown RBP3.66□□□□□ -1.82
NIPBL-206ENST00000509429 ZNF670Q9BS34 389 aa3.66□□□□□ -1.82
NIPBL-206ENST00000509429 MRPL32Q9BYC8 188 aaKnown RBP3.66□□□□□ -1.82
NIPBL-206ENST00000509429 WDR61Q9GZS3 305 aaKnown RBP3.66□□□□□ -1.82
NIPBL-206ENST00000509429 WDR13Q9H1Z4 485 aa3.66□□□□□ -1.82
NIPBL-206ENST00000509429 OR51E2Q9H255 320 aa3.66□□□□□ -1.82
NIPBL-206ENST00000509429 NPVFQ9HCQ7 196 aa3.66□□□□□ -1.82
NIPBL-206ENST00000509429 UBE2TQ9NPD8 197 aaPredicted RBP3.66□□□□□ -1.82
NIPBL-206ENST00000509429 PARP11Q9NR21 331 aa3.66□□□□□ -1.82
NIPBL-206ENST00000509429 MARCH5Q9NX47 278 aa3.66□□□□□ -1.82
NIPBL-206ENST00000509429 PLEKHB1Q9UF11 243 aaPredicted RBP3.66□□□□□ -1.82
NIPBL-206ENST00000509429 MED31Q9Y3C7 131 aa3.66□□□□□ -1.82
NIPBL-206ENST00000509429 MYH9P35579 1960 aaKnown RBP3.65□□□□□ -1.82
NIPBL-206ENST00000509429 A0A0U1RQV1 116 aa3.65□□□□□ -1.83
NIPBL-206ENST00000509429 TEX50A0A1B0GTY4 177 aa3.65□□□□□ -1.83
NIPBL-206ENST00000509429 IGLC7A0M8Q6 106 aa3.65□□□□□ -1.83
NIPBL-206ENST00000509429 GGT3PA6NGU5 568 aa3.65□□□□□ -1.83
NIPBL-206ENST00000509429 DDTLA6NHG4 134 aaPredicted RBP3.65□□□□□ -1.83
NIPBL-206ENST00000509429 NCBP2LA6PVI3 153 aaKnown RBP3.65□□□□□ -1.83
NIPBL-206ENST00000509429 GGTLC3B5MD39 225 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms