RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 DFFBO76075 338 aa12.2□□□□□ -0.46
PHF3-209ENST00000509330 SNCAP37840 140 aa12.2□□□□□ -0.46
PHF3-209ENST00000509330 AKR1C3P42330 323 aa12.2□□□□□ -0.46
PHF3-209ENST00000509330 FGF8P55075 233 aaPredicted RBP12.2□□□□□ -0.46
PHF3-209ENST00000509330 HBG1P69891 147 aa12.2□□□□□ -0.46
PHF3-209ENST00000509330 HBG2P69892 147 aa12.2□□□□□ -0.46
PHF3-209ENST00000509330 GUK1Q16774 197 aa12.2□□□□□ -0.46
PHF3-209ENST00000509330 HAGHQ16775 308 aa12.2□□□□□ -0.46
PHF3-209ENST00000509330 ZNF672Q499Z4 452 aaPredicted RBP12.2□□□□□ -0.46
PHF3-209ENST00000509330 PRORYQ9H606 182 aa12.2□□□□□ -0.46
PHF3-209ENST00000509330 COA4Q9NYJ1 87 aa12.2□□□□□ -0.46
PHF3-209ENST00000509330 STRAPQ9Y3F4 350 aaKnown RBP12.2□□□□□ -0.46
PHF3-209ENST00000509330 VPS13CQ709C8 3753 aa12.2□□□□□ -0.46
PHF3-209ENST00000509330 MAP1AP78559 2803 aaPredicted RBP12.2□□□□□ -0.46
PHF3-209ENST00000509330 IGSF10Q6WRI0 2623 aa12.2□□□□□ -0.46
PHF3-209ENST00000509330 H7C2Y5 167 aa12.2□□□□□ -0.46
PHF3-209ENST00000509330 NQO2P16083 231 aa12.2□□□□□ -0.46
PHF3-209ENST00000509330 TAS2R30P59541 319 aa12.2□□□□□ -0.46
PHF3-209ENST00000509330 CD300LFQ8TDQ1 290 aa12.2□□□□□ -0.46
PHF3-209ENST00000509330 NKX6-2Q9C056 277 aaPredicted RBP12.2□□□□□ -0.46
PHF3-209ENST00000509330 GAL3ST2Q9H3Q3 398 aa12.2□□□□□ -0.46
PHF3-209ENST00000509330 SEBOXQ9HB31 216 aaPredicted RBP12.2□□□□□ -0.46
PHF3-209ENST00000509330 SMCO3A2RU48 225 aa12.19□□□□□ -0.46
PHF3-209ENST00000509330 IFNA10P01566 189 aa12.19□□□□□ -0.46
PHF3-209ENST00000509330 GNLYP22749 145 aa12.19□□□□□ -0.46
PHF3-209ENST00000509330 LOXP28300 417 aaPredicted RBP12.19□□□□□ -0.46
PHF3-209ENST00000509330 LCN15Q6UWW0 184 aa12.19□□□□□ -0.46
PHF3-209ENST00000509330 ETV3LQ6ZN32 361 aa12.19□□□□□ -0.46
PHF3-209ENST00000509330 ABHD12Q8N2K0 398 aa12.19□□□□□ -0.46
PHF3-209ENST00000509330 MRPL20Q9BYC9 149 aaKnown RBP12.19□□□□□ -0.46
PHF3-209ENST00000509330 LAMP3Q9UQV4 416 aa12.19□□□□□ -0.46
PHF3-209ENST00000509330 H2AFB1P0C5Y9 115 aa12.19□□□□□ -0.46
PHF3-209ENST00000509330 CT45A6P0DMU7 189 aa12.19□□□□□ -0.46
PHF3-209ENST00000509330 CT45A5P0DMU8 189 aa12.19□□□□□ -0.46
PHF3-209ENST00000509330 CT45A7P0DMV0 189 aa12.19□□□□□ -0.46
PHF3-209ENST00000509330 OR13C7P0DN81 318 aa12.19□□□□□ -0.46
PHF3-209ENST00000509330 NPBWR1P48145 328 aa12.19□□□□□ -0.46
PHF3-209ENST00000509330 TFF3Q07654 80 aa12.19□□□□□ -0.46
PHF3-209ENST00000509330 SSX8Q7RTT4 187 aa12.19□□□□□ -0.46
PHF3-209ENST00000509330 OR4S2Q8NH73 311 aa12.19□□□□□ -0.46
PHF3-209ENST00000509330 C20orf24Q9BUV8 137 aa12.19□□□□□ -0.46
PHF3-209ENST00000509330 HEYLQ9NQ87 328 aaPredicted RBP12.19□□□□□ -0.46
PHF3-209ENST00000509330 FBP1P09467 338 aa12.18□□□□□ -0.46
PHF3-209ENST00000509330 OR4A47Q6IF82 309 aa12.18□□□□□ -0.46
PHF3-209ENST00000509330 TMEM14EPQ6UXP3 125 aa12.18□□□□□ -0.46
PHF3-209ENST00000509330 CBLN2Q8IUK8 224 aa12.18□□□□□ -0.46
PHF3-209ENST00000509330 OR10X1Q8NGY0 326 aa12.18□□□□□ -0.46
PHF3-209ENST00000509330 DDB2Q92466 427 aa12.18□□□□□ -0.46
PHF3-209ENST00000509330 GNPNAT1Q96EK6 184 aaPredicted RBP12.18□□□□□ -0.46
PHF3-209ENST00000509330 TET2Q6N021 2002 aaPredicted RBP12.18□□□□□ -0.46
PHF3-209ENST00000509330 IGHV3-72A0A0B4J1Y9 119 aa12.18□□□□□ -0.46
PHF3-209ENST00000509330 FAM90A26D6RGX4 464 aa12.18□□□□□ -0.46
PHF3-209ENST00000509330 SOD3P08294 240 aa12.18□□□□□ -0.46
PHF3-209ENST00000509330 HOXA1P49639 335 aaPredicted RBP12.18□□□□□ -0.46
PHF3-209ENST00000509330 FBXL19-AS1Q494R0 122 aa12.18□□□□□ -0.46
PHF3-209ENST00000509330 SLC25A48Q6ZT89 311 aaKnown RBP12.18□□□□□ -0.46
PHF3-209ENST00000509330 SSX7Q7RTT5 188 aa12.18□□□□□ -0.46
PHF3-209ENST00000509330 RPRMQ9NS64 109 aa12.18□□□□□ -0.46
PHF3-209ENST00000509330 SLC35D1Q9NTN3 355 aa12.18□□□□□ -0.46
PHF3-209ENST00000509330 FLNCQ14315 2725 aa12.18□□□□□ -0.46
PHF3-209ENST00000509330 SRRM4A7MD48 611 aaKnown RBP12.18□□□□□ -0.46
PHF3-209ENST00000509330 RELBQ01201 579 aa12.18□□□□□ -0.46
PHF3-209ENST00000509330 EFNB3Q15768 340 aa12.18□□□□□ -0.46
PHF3-209ENST00000509330 OR10P1Q8NGE3 313 aa12.18□□□□□ -0.46
PHF3-209ENST00000509330 RAB9BQ9NP90 201 aa12.18□□□□□ -0.46
PHF3-209ENST00000509330 DVL1P1P54792 670 aaPredicted RBP12.17□□□□□ -0.46
PHF3-209ENST00000509330 WDR61Q9GZS3 305 aaKnown RBP12.17□□□□□ -0.46
PHF3-209ENST00000509330 A0A1W2PPR1 153 aa12.17□□□□□ -0.46
PHF3-209ENST00000509330 RRHO14718 337 aa12.17□□□□□ -0.46
PHF3-209ENST00000509330 RAB5CP51148 216 aa12.17□□□□□ -0.46
PHF3-209ENST00000509330 TCTEX1D1Q8N7M0 179 aa12.17□□□□□ -0.46
PHF3-209ENST00000509330 IGFBPL1Q8WX77 278 aa12.17□□□□□ -0.46
PHF3-209ENST00000509330 CORO2AQ92828 525 aa12.17□□□□□ -0.46
PHF3-209ENST00000509330 AIFM2Q9BRQ8 373 aa12.17□□□□□ -0.46
PHF3-209ENST00000509330 CD5P06127 495 aa12.16□□□□□ -0.46
PHF3-209ENST00000509330 THBS3P49746 956 aa12.16□□□□□ -0.46
PHF3-209ENST00000509330 SPSB3Q6PJ21 355 aa12.16□□□□□ -0.46
PHF3-209ENST00000509330 HEPN1Q6WQI6 88 aa12.16□□□□□ -0.46
PHF3-209ENST00000509330 SVBPQ8N300 66 aa12.16□□□□□ -0.46
PHF3-209ENST00000509330 OR13D1Q8NGV5 346 aa12.16□□□□□ -0.46
PHF3-209ENST00000509330 LYPD6BQ8NI32 183 aa12.16□□□□□ -0.46
PHF3-209ENST00000509330 PLXNB1O43157 2135 aa12.16□□□□□ -0.46
PHF3-209ENST00000509330 C15orf62A8K5M9 175 aa12.16□□□□□ -0.46
PHF3-209ENST00000509330 NDUFS7O75251 213 aa12.16□□□□□ -0.46
PHF3-209ENST00000509330 FGF7P21781 194 aa12.16□□□□□ -0.46
PHF3-209ENST00000509330 CDKN1AP38936 164 aa12.16□□□□□ -0.46
PHF3-209ENST00000509330 RAB2AP61019 212 aa12.16□□□□□ -0.46
PHF3-209ENST00000509330 LRRC75BQ2VPJ9 315 aa12.16□□□□□ -0.46
PHF3-209ENST00000509330 TAF15Q92804 592 aaKnown RBP eCLIP12.16□□□□□ -0.46
PHF3-209ENST00000509330 WNK2Q9Y3S1 2297 aa12.16□□□□□ -0.46
PHF3-209ENST00000509330 DAOP14920 347 aa12.15□□□□□ -0.46
PHF3-209ENST00000509330 PAX6P26367 422 aa12.15□□□□□ -0.46
PHF3-209ENST00000509330 TCF19Q9Y242 345 aa12.15□□□□□ -0.46
PHF3-209ENST00000509330 ZFP92A6NM28 416 aa12.15□□□□□ -0.46
PHF3-209ENST00000509330 NUDT19A8MXV4 375 aa12.15□□□□□ -0.46
PHF3-209ENST00000509330 UMAD1C9J7I0 102 aa12.15□□□□□ -0.46
PHF3-209ENST00000509330 TRIM77I1YAP6 450 aa12.15□□□□□ -0.46
PHF3-209ENST00000509330 TNFRSF13BO14836 293 aaPredicted RBP12.15□□□□□ -0.46
PHF3-209ENST00000509330 PPIHO43447 177 aaKnown RBP12.15□□□□□ -0.46
PHF3-209ENST00000509330 COX7A1P24310 79 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms