RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 DERL1Q9BUN8 251 aa3.25□□□□□ -1.89
NEDD4-209ENST00000508871 ZNF696Q9H7X3 374 aa3.25□□□□□ -1.89
NEDD4-209ENST00000508871 KLF13Q9Y2Y9 288 aaPredicted RBP3.25□□□□□ -1.89
NEDD4-209ENST00000508871 VWC2LB2RUY7 222 aa3.25□□□□□ -1.89
NEDD4-209ENST00000508871 ZNF728P0DKX0 622 aa3.25□□□□□ -1.89
NEDD4-209ENST00000508871 EFNB3Q15768 340 aa3.25□□□□□ -1.89
NEDD4-209ENST00000508871 FAM201AQ5SY85 155 aa3.25□□□□□ -1.89
NEDD4-209ENST00000508871 SAXO2Q658L1 398 aa3.25□□□□□ -1.89
NEDD4-209ENST00000508871 LYPD4Q6UWN0 246 aa3.25□□□□□ -1.89
NEDD4-209ENST00000508871 RPS27LQ71UM5 84 aaKnown RBP3.25□□□□□ -1.89
NEDD4-209ENST00000508871 NTN5Q8WTR8 489 aaPredicted RBP3.25□□□□□ -1.89
NEDD4-209ENST00000508871 RASL12Q9NYN1 266 aa3.25□□□□□ -1.89
NEDD4-209ENST00000508871 PRNDQ9UKY0 176 aa3.25□□□□□ -1.89
NEDD4-209ENST00000508871 CYSLTR1Q9Y271 337 aa3.25□□□□□ -1.89
NEDD4-209ENST00000508871 IGHV4-4A0A075B6R2 117 aa3.25□□□□□ -1.89
NEDD4-209ENST00000508871 LOC107984156A0A0G2JMH3 177 aa3.25□□□□□ -1.89
NEDD4-209ENST00000508871 DPRXA6NFQ7 191 aa3.25□□□□□ -1.89
NEDD4-209ENST00000508871 DDTP30046 118 aa3.25□□□□□ -1.89
NEDD4-209ENST00000508871 TCF15Q12870 199 aa3.25□□□□□ -1.89
NEDD4-209ENST00000508871 ARL17AQ8IVW1 177 aa3.25□□□□□ -1.89
NEDD4-209ENST00000508871 NKAPP1Q8N9T2 125 aa3.25□□□□□ -1.89
NEDD4-209ENST00000508871 OR5AP2Q8NGF4 316 aa3.25□□□□□ -1.89
NEDD4-209ENST00000508871 OR4B1Q8NGF8 309 aa3.25□□□□□ -1.89
NEDD4-209ENST00000508871 OR2T10Q8NGZ9 312 aa3.25□□□□□ -1.89
NEDD4-209ENST00000508871 RAB2BQ8WUD1 216 aa3.25□□□□□ -1.89
NEDD4-209ENST00000508871 C2orf88Q9BSF0 95 aa3.25□□□□□ -1.89
NEDD4-209ENST00000508871 NDFIP1Q9BT67 221 aa3.25□□□□□ -1.89
NEDD4-209ENST00000508871 MMP26Q9NRE1 261 aa3.25□□□□□ -1.89
NEDD4-209ENST00000508871 TMEM74BQ9NUR3 256 aa3.25□□□□□ -1.89
NEDD4-209ENST00000508871 BET1LQ9NYM9 111 aa3.25□□□□□ -1.89
NEDD4-209ENST00000508871 PCM1Q15154 2024 aa3.25□□□□□ -1.89
NEDD4-209ENST00000508871 TRBV20OR9-2A0A075B6H5 130 aa3.25□□□□□ -1.89
NEDD4-209ENST00000508871 FXYD1O00168 92 aa3.25□□□□□ -1.89
NEDD4-209ENST00000508871 PGAM2P15259 253 aa3.25□□□□□ -1.89
NEDD4-209ENST00000508871 GPX2P18283 190 aa3.25□□□□□ -1.89
NEDD4-209ENST00000508871 RPL30P62888 115 aaKnown RBP3.25□□□□□ -1.89
NEDD4-209ENST00000508871 SPATA31B1PQ5VZV4 182 aa3.25□□□□□ -1.89
NEDD4-209ENST00000508871 SLC25A34Q6PIV7 304 aa3.25□□□□□ -1.89
NEDD4-209ENST00000508871 ZNF493Q6ZR52 646 aa3.25□□□□□ -1.89
NEDD4-209ENST00000508871 LRRC28Q86X40 367 aaPredicted RBP3.25□□□□□ -1.89
NEDD4-209ENST00000508871 GKN2Q86XP6 184 aa3.25□□□□□ -1.89
NEDD4-209ENST00000508871 SPEM1Q8N4L4 309 aa3.25□□□□□ -1.89
NEDD4-209ENST00000508871 ZNF555Q8NEP9 628 aa3.25□□□□□ -1.89
NEDD4-209ENST00000508871 OR5H6Q8NGV6 325 aa3.25□□□□□ -1.89
NEDD4-209ENST00000508871 SGMS2Q8NHU3 365 aa3.25□□□□□ -1.89
NEDD4-209ENST00000508871 CLDN23Q96B33 292 aa3.25□□□□□ -1.89
NEDD4-209ENST00000508871 RARRES3Q9UL19 164 aa3.25□□□□□ -1.89
NEDD4-209ENST00000508871 OR51B2Q9Y5P1 312 aa3.25□□□□□ -1.89
NEDD4-209ENST00000508871 CT45A10P0DMU9 189 aa3.24□□□□□ -1.89
NEDD4-209ENST00000508871 DIO3P55073 304 aa3.24□□□□□ -1.89
NEDD4-209ENST00000508871 H2BFSP57053 126 aa3.24□□□□□ -1.89
NEDD4-209ENST00000508871 SGPP2Q8IWX5 399 aa3.24□□□□□ -1.89
NEDD4-209ENST00000508871 OR10D3Q8NH80 312 aa3.24□□□□□ -1.89
NEDD4-209ENST00000508871 ZNF503Q96F45 646 aa3.24□□□□□ -1.89
NEDD4-209ENST00000508871 FAIMQ9NVQ4 179 aa3.24□□□□□ -1.89
NEDD4-209ENST00000508871 DOCK8Q8NF50 2099 aa3.24□□□□□ -1.89
NEDD4-209ENST00000508871 C7orf71A4D174 169 aa3.24□□□□□ -1.89
NEDD4-209ENST00000508871 A6NED7 52 aa3.24□□□□□ -1.89
NEDD4-209ENST00000508871 SNCAP37840 140 aa3.24□□□□□ -1.89
NEDD4-209ENST00000508871 MP68P56378 58 aa3.24□□□□□ -1.89
NEDD4-209ENST00000508871 TMEM258P61165 79 aa3.24□□□□□ -1.89
NEDD4-209ENST00000508871 IFITM2Q01629 132 aa3.24□□□□□ -1.89
NEDD4-209ENST00000508871 GAGE1Q13065 139 aa3.24□□□□□ -1.89
NEDD4-209ENST00000508871 PEA15Q15121 130 aa3.24□□□□□ -1.89
NEDD4-209ENST00000508871 ZSWIM7Q19AV6 140 aa3.24□□□□□ -1.89
NEDD4-209ENST00000508871 GSG1Q2KHT4 349 aa3.24□□□□□ -1.89
NEDD4-209ENST00000508871 ZNF528Q3MIS6 628 aa3.24□□□□□ -1.89
NEDD4-209ENST00000508871 TMEM86BQ8N661 226 aa3.24□□□□□ -1.89
NEDD4-209ENST00000508871 ZNF645Q8N7E2 425 aa3.24□□□□□ -1.89
NEDD4-209ENST00000508871 OR5D16Q8NGK9 328 aa3.24□□□□□ -1.89
NEDD4-209ENST00000508871 GALMQ96C23 342 aa3.24□□□□□ -1.89
NEDD4-209ENST00000508871 TMEM243Q9BU79 118 aa3.24□□□□□ -1.89
NEDD4-209ENST00000508871 MRPL16Q9NX20 251 aaKnown RBP3.24□□□□□ -1.89
NEDD4-209ENST00000508871 A0A0J9YY10 115 aa3.24□□□□□ -1.89
NEDD4-209ENST00000508871 ZNF878C9JN71 531 aa3.24□□□□□ -1.89
NEDD4-209ENST00000508871 E9PQ18 207 aa3.24□□□□□ -1.89
NEDD4-209ENST00000508871 CDC42EP2O14613 210 aa3.24□□□□□ -1.89
NEDD4-209ENST00000508871 CST7O76096 145 aa3.24□□□□□ -1.89
NEDD4-209ENST00000508871 CXCL2P19875 107 aa3.24□□□□□ -1.89
NEDD4-209ENST00000508871 EVI2AP22794 236 aa3.24□□□□□ -1.89
NEDD4-209ENST00000508871 UBA52P62987 128 aaKnown RBP3.24□□□□□ -1.89
NEDD4-209ENST00000508871 CD226Q15762 336 aa3.24□□□□□ -1.89
NEDD4-209ENST00000508871 C4orf26Q17RF5 130 aa3.24□□□□□ -1.89
NEDD4-209ENST00000508871 FBXW9Q5XUX1 488 aa3.24□□□□□ -1.89
NEDD4-209ENST00000508871 IZUMO2Q6UXV1 221 aa3.24□□□□□ -1.89
NEDD4-209ENST00000508871 PLPP5Q8NEB5 264 aa3.24□□□□□ -1.89
NEDD4-209ENST00000508871 PYURFQ96I23 114 aa3.24□□□□□ -1.89
NEDD4-209ENST00000508871 GPR82Q96P67 336 aa3.24□□□□□ -1.89
NEDD4-209ENST00000508871 KMT2EQ8IZD2 1858 aa3.24□□□□□ -1.89
NEDD4-209ENST00000508871 SMIM31A0A1B0GVY4 71 aa3.24□□□□□ -1.89
NEDD4-209ENST00000508871 LMX1BO60663 402 aa3.24□□□□□ -1.89
NEDD4-209ENST00000508871 CD14P08571 375 aa3.24□□□□□ -1.89
NEDD4-209ENST00000508871 CST2P09228 141 aa3.24□□□□□ -1.89
NEDD4-209ENST00000508871 LIFP15018 202 aa3.24□□□□□ -1.89
NEDD4-209ENST00000508871 PLP2Q04941 152 aa3.24□□□□□ -1.89
NEDD4-209ENST00000508871 LDLRAD2Q5SZI1 272 aa3.24□□□□□ -1.89
NEDD4-209ENST00000508871 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.24□□□□□ -1.89
NEDD4-209ENST00000508871 SLC35E4Q6ICL7 350 aa3.24□□□□□ -1.89
NEDD4-209ENST00000508871 SLC25A47Q6Q0C1 308 aa3.24□□□□□ -1.89
NEDD4-209ENST00000508871 LRP11Q86VZ4 500 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms