RNA–Protein interactions for RNA: ENST00000508604.5

NUP54-208, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-208ENST00000508604 SLC25A31Q9H0C2 315 aa1.29□□□□□ -2.2
NUP54-208ENST00000508604 SMDT1Q9H4I9 107 aa1.29□□□□□ -2.2
NUP54-208ENST00000508604 BANF2Q9H503 90 aa1.29□□□□□ -2.2
NUP54-208ENST00000508604 RDH14Q9HBH5 336 aa1.29□□□□□ -2.2
NUP54-208ENST00000508604 ACOT13Q9NPJ3 140 aa1.29□□□□□ -2.2
NUP54-208ENST00000508604 DCAF13Q9NV06 445 aaKnown RBP1.29□□□□□ -2.2
NUP54-208ENST00000508604 TMEM100Q9NV29 134 aa1.29□□□□□ -2.2
NUP54-208ENST00000508604 DNAJC27Q9NZQ0 273 aa1.29□□□□□ -2.2
NUP54-208ENST00000508604 OR1A1Q9P1Q5 309 aa1.29□□□□□ -2.2
NUP54-208ENST00000508604 UQCR10Q9UDW1 63 aa1.29□□□□□ -2.2
NUP54-208ENST00000508604 PRO0628Q9UI54 55 aa1.29□□□□□ -2.2
NUP54-208ENST00000508604 MMP17Q9ULZ9 603 aa1.29□□□□□ -2.2
NUP54-208ENST00000508604 BOKQ9UMX3 212 aaPredicted RBP1.29□□□□□ -2.2
NUP54-208ENST00000508604 SIGLEC7Q9Y286 467 aa1.29□□□□□ -2.2
NUP54-208ENST00000508604 ZNF835Q9Y2P0 537 aa1.29□□□□□ -2.2
NUP54-208ENST00000508604 LAMTOR2Q9Y2Q5 125 aa1.29□□□□□ -2.2
NUP54-208ENST00000508604 ORC6Q9Y5N6 252 aa1.29□□□□□ -2.2
NUP54-208ENST00000508604 SETBP1Q9Y6X0 1596 aa1.29□□□□□ -2.2
NUP54-208ENST00000508604 SCN9AQ15858 1988 aa1.29□□□□□ -2.2
NUP54-208ENST00000508604 FRMPD3Q5JV73 1810 aa1.29□□□□□ -2.2
NUP54-208ENST00000508604 FOCADQ5VW36 1801 aa1.29□□□□□ -2.2
NUP54-208ENST00000508604 PREX1Q8TCU6 1659 aa1.29□□□□□ -2.2
NUP54-208ENST00000508604 TULP4Q9NRJ4 1543 aa1.29□□□□□ -2.2
NUP54-208ENST00000508604 KDM3BQ7LBC6 1761 aa1.29□□□□□ -2.2
NUP54-208ENST00000508604 USP32Q8NFA0 1604 aa1.29□□□□□ -2.2
NUP54-208ENST00000508604 RAPGEF6Q8TEU7 1601 aa1.29□□□□□ -2.2
NUP54-208ENST00000508604 RIMBP3Q9UFD9 1639 aa1.29□□□□□ -2.2
NUP54-208ENST00000508604 PHLPP1O60346 1717 aa1.29□□□□□ -2.2
NUP54-208ENST00000508604 FMN2Q9NZ56 1722 aa1.29□□□□□ -2.2
NUP54-208ENST00000508604 FCGBPQ9Y6R7 5405 aaPredicted RBP1.29□□□□□ -2.2
NUP54-208ENST00000508604 FRMPD1Q5SYB0 1578 aa1.29□□□□□ -2.2
NUP54-208ENST00000508604 IGLV2-18A0A075B6J9 118 aa1.29□□□□□ -2.2
NUP54-208ENST00000508604 TRAV36DV7A0A075B6V5 113 aa1.29□□□□□ -2.2
NUP54-208ENST00000508604 TRBV9A0A0B4J1U6 114 aa1.29□□□□□ -2.2
NUP54-208ENST00000508604 A0A0B4J2A0 478 aa1.29□□□□□ -2.2
NUP54-208ENST00000508604 hADV38S2A0JD32 116 aa1.29□□□□□ -2.2
NUP54-208ENST00000508604 C7orf77A4D0Y5 90 aa1.29□□□□□ -2.2
NUP54-208ENST00000508604 FABP5P3A8MUU1 101 aa1.29□□□□□ -2.2
NUP54-208ENST00000508604 SNRPGP15A8MWD9 76 aa1.29□□□□□ -2.2
NUP54-208ENST00000508604 B4DEV8 164 aa1.29□□□□□ -2.2
NUP54-208ENST00000508604 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.29□□□□□ -2.2
NUP54-208ENST00000508604 H7BYZ3 331 aa1.29□□□□□ -2.2
NUP54-208ENST00000508604 J3QLI3 93 aa1.29□□□□□ -2.2
NUP54-208ENST00000508604 M0R2Z0 102 aa1.29□□□□□ -2.2
NUP54-208ENST00000508604 SULT2B1O00204 365 aa1.29□□□□□ -2.2
NUP54-208ENST00000508604 HSD17B6O14756 317 aa1.29□□□□□ -2.2
NUP54-208ENST00000508604 HMGB3O15347 200 aaKnown RBP1.29□□□□□ -2.2
NUP54-208ENST00000508604 ZNF207O43670 478 aaKnown RBP1.29□□□□□ -2.2
NUP54-208ENST00000508604 EIF4E2O60573 245 aaKnown RBP1.29□□□□□ -2.2
NUP54-208ENST00000508604 GCM2O75603 506 aaPredicted RBP1.29□□□□□ -2.2
NUP54-208ENST00000508604 SIX6O95475 246 aa1.29□□□□□ -2.2
NUP54-208ENST00000508604 MAS1P04201 325 aa1.29□□□□□ -2.2
NUP54-208ENST00000508604 CRYGDP07320 174 aa1.29□□□□□ -2.2
NUP54-208ENST00000508604 CTSDP07339 412 aaPredicted RBP1.29□□□□□ -2.2
NUP54-208ENST00000508604 OR12D1P0DN82 309 aa1.29□□□□□ -2.2
NUP54-208ENST00000508604 CYBAP13498 195 aa1.29□□□□□ -2.2
NUP54-208ENST00000508604 ATF1P18846 271 aa1.29□□□□□ -2.2
NUP54-208ENST00000508604 CXCL2P19875 107 aa1.29□□□□□ -2.2
NUP54-208ENST00000508604 NFYBP25208 207 aa1.29□□□□□ -2.2
NUP54-208ENST00000508604 PSMB9P28065 219 aa1.29□□□□□ -2.2
NUP54-208ENST00000508604 CD34P28906 385 aa1.29□□□□□ -2.2
NUP54-208ENST00000508604 FGF9P31371 208 aaPredicted RBP1.29□□□□□ -2.2
NUP54-208ENST00000508604 SDC2P34741 201 aa1.29□□□□□ -2.2
NUP54-208ENST00000508604 GABRA3P34903 492 aa1.29□□□□□ -2.2
NUP54-208ENST00000508604 CX3CR1P49238 355 aa1.29□□□□□ -2.2
NUP54-208ENST00000508604 LHX2P50458 406 aa1.29□□□□□ -2.2
NUP54-208ENST00000508604 NUDT2P50583 147 aa1.29□□□□□ -2.2
NUP54-208ENST00000508604 ATP1B3P54709 279 aa1.29□□□□□ -2.2
NUP54-208ENST00000508604 TCL1AP56279 114 aa1.29□□□□□ -2.2
NUP54-208ENST00000508604 TAS2R31P59538 309 aa1.29□□□□□ -2.2
NUP54-208ENST00000508604 LCN6P62502 163 aa1.29□□□□□ -2.2
NUP54-208ENST00000508604 CRADDP78560 199 aa1.29□□□□□ -2.2
NUP54-208ENST00000508604 MEF2BQ02080 365 aaPredicted RBP1.29□□□□□ -2.2
NUP54-208ENST00000508604 GINS1Q14691 196 aa1.29□□□□□ -2.2
NUP54-208ENST00000508604 MAD2L1BPQ15013 274 aaPredicted RBP1.29□□□□□ -2.2
NUP54-208ENST00000508604 RGNQ15493 299 aa1.29□□□□□ -2.2
NUP54-208ENST00000508604 OR8B8Q15620 311 aa1.29□□□□□ -2.2
NUP54-208ENST00000508604 SYPL1Q16563 259 aa1.29□□□□□ -2.2
NUP54-208ENST00000508604 LRRC75BQ2VPJ9 315 aa1.29□□□□□ -2.2
NUP54-208ENST00000508604 LINC01620Q4KN68 170 aa1.29□□□□□ -2.2
NUP54-208ENST00000508604 ACTL10Q5JWF8 245 aa1.29□□□□□ -2.2
NUP54-208ENST00000508604 SPANXN3Q5MJ09 141 aa1.29□□□□□ -2.2
NUP54-208ENST00000508604 CLEC12AQ5QGZ9 265 aa1.29□□□□□ -2.2
NUP54-208ENST00000508604 GLT8D1Q68CQ7 371 aa1.29□□□□□ -2.2
NUP54-208ENST00000508604 MRPL54Q6P161 138 aaKnown RBP1.29□□□□□ -2.2
NUP54-208ENST00000508604 ARL9Q6T311 187 aa1.29□□□□□ -2.2
NUP54-208ENST00000508604 TMEM184AQ6ZMB5 413 aa1.29□□□□□ -2.2
NUP54-208ENST00000508604 TEX43Q6ZNM6 134 aa1.29□□□□□ -2.2
NUP54-208ENST00000508604 FOXI2Q6ZQN5 318 aa1.29□□□□□ -2.2
NUP54-208ENST00000508604 LINC01561Q8N1V8 128 aa1.29□□□□□ -2.2
NUP54-208ENST00000508604 UMODL1-AS1Q8N2C9 162 aa1.29□□□□□ -2.2
NUP54-208ENST00000508604 OSR2Q8N2R0 312 aa1.29□□□□□ -2.2
NUP54-208ENST00000508604 MUC15Q8N387 334 aa1.29□□□□□ -2.2
NUP54-208ENST00000508604 KRTCAP2Q8N6L1 136 aa1.29□□□□□ -2.2
NUP54-208ENST00000508604 PRELID2Q8N945 189 aa1.29□□□□□ -2.2
NUP54-208ENST00000508604 C5orf17Q8NAS9 161 aa1.29□□□□□ -2.2
NUP54-208ENST00000508604 GPR26Q8NDV2 337 aa1.29□□□□□ -2.2
NUP54-208ENST00000508604 GPR32P1Q8NGA4 272 aa1.29□□□□□ -2.2
NUP54-208ENST00000508604 OR4B1Q8NGF8 309 aa1.29□□□□□ -2.2
NUP54-208ENST00000508604 OR52E2Q8NGJ4 325 aa1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms