RNA–Protein interactions for RNA: ENST00000508499.5

USP46-207, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2 BASIC

Gene USP46, Length 1,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-207ENST00000508499 DHRS2Q13268 280 aa6.91□□□□□ -1.3
USP46-207ENST00000508499 TMEM187Q14656 261 aa6.91□□□□□ -1.3
USP46-207ENST00000508499 CCBE1Q6UXH8 406 aaPredicted RBP6.91□□□□□ -1.3
USP46-207ENST00000508499 RBMS3Q6XE24 437 aaKnown RBP6.91□□□□□ -1.3
USP46-207ENST00000508499 GLDNQ6ZMI3 551 aaPredicted RBP6.91□□□□□ -1.3
USP46-207ENST00000508499 IL17RELQ6ZVW7 336 aa6.91□□□□□ -1.3
USP46-207ENST00000508499 LYG2Q86SG7 212 aa6.91□□□□□ -1.3
USP46-207ENST00000508499 MOB3BQ86TA1 216 aa6.91□□□□□ -1.3
USP46-207ENST00000508499 FAM219AQ8IW50 185 aa6.91□□□□□ -1.3
USP46-207ENST00000508499 SPAG16Q8N0X2 631 aa6.91□□□□□ -1.3
USP46-207ENST00000508499 FAM71E2Q8N5Q1 922 aa6.91□□□□□ -1.3
USP46-207ENST00000508499 DRAXINQ8NBI3 349 aaPredicted RBP6.91□□□□□ -1.3
USP46-207ENST00000508499 ADAD2Q8NCV1 583 aaKnown RBP6.91□□□□□ -1.3
USP46-207ENST00000508499 VSTM2AQ8TAG5 236 aa6.91□□□□□ -1.3
USP46-207ENST00000508499 TP53RKQ96S44 253 aa6.91□□□□□ -1.3
USP46-207ENST00000508499 TSNAXQ99598 290 aaKnown RBP6.91□□□□□ -1.3
USP46-207ENST00000508499 KRTAP9-9Q9BYP9 154 aa6.91□□□□□ -1.3
USP46-207ENST00000508499 KRTAP9-4Q9BYQ2 154 aa6.91□□□□□ -1.3
USP46-207ENST00000508499 PLSCR3Q9NRY6 295 aa6.91□□□□□ -1.3
USP46-207ENST00000508499 C1RLQ9NZP8 487 aa6.91□□□□□ -1.3
USP46-207ENST00000508499 C9orf170A2RU37 121 aa6.9□□□□□ -1.31
USP46-207ENST00000508499 BTBD17A6NE02 478 aa6.9□□□□□ -1.31
USP46-207ENST00000508499 DBX1A6NMT0 343 aa6.9□□□□□ -1.31
USP46-207ENST00000508499 INMT-MINDY4F8WBC2 141 aa6.9□□□□□ -1.31
USP46-207ENST00000508499 H3BUX3 64 aa6.9□□□□□ -1.31
USP46-207ENST00000508499 RAMP3O60896 148 aa6.9□□□□□ -1.31
USP46-207ENST00000508499 FCGR3BO75015 233 aa6.9□□□□□ -1.31
USP46-207ENST00000508499 DHFRP00374 187 aa6.9□□□□□ -1.31
USP46-207ENST00000508499 IGKV1D-33P01593 117 aa6.9□□□□□ -1.31
USP46-207ENST00000508499 IGKV1-33P01594 117 aa6.9□□□□□ -1.31
USP46-207ENST00000508499 IGLV2-23P01705 113 aa6.9□□□□□ -1.31
USP46-207ENST00000508499 IGHV4-59P01825 116 aa6.9□□□□□ -1.31
USP46-207ENST00000508499 HLA-AP01891 365 aaKnown RBP6.9□□□□□ -1.31
USP46-207ENST00000508499 CRYGBP07316 175 aa6.9□□□□□ -1.31
USP46-207ENST00000508499 RNASE1P07998 156 aaKnown RBP6.9□□□□□ -1.31
USP46-207ENST00000508499 OR5AC1P0C628 307 aa6.9□□□□□ -1.31
USP46-207ENST00000508499 P0C879 139 aa6.9□□□□□ -1.31
USP46-207ENST00000508499 NQO2P16083 231 aa6.9□□□□□ -1.31
USP46-207ENST00000508499 LINC00205P59089 165 aa6.9□□□□□ -1.31
USP46-207ENST00000508499 UBE2KP61086 200 aa6.9□□□□□ -1.31
USP46-207ENST00000508499 PPP1R1AQ13522 171 aa6.9□□□□□ -1.31
USP46-207ENST00000508499 AARDQ4LEZ3 155 aa6.9□□□□□ -1.31
USP46-207ENST00000508499 TMED4Q7Z7H5 227 aa6.9□□□□□ -1.31
USP46-207ENST00000508499 SIGLECL1Q8N7X8 197 aa6.9□□□□□ -1.31
USP46-207ENST00000508499 TEX45Q8NA69 505 aa6.9□□□□□ -1.31
USP46-207ENST00000508499 OR51H1Q8NH63 302 aa6.9□□□□□ -1.31
USP46-207ENST00000508499 OR4A5Q8NH83 315 aa6.9□□□□□ -1.31
USP46-207ENST00000508499 MITD1Q8WV92 249 aa6.9□□□□□ -1.31
USP46-207ENST00000508499 RBPMSQ93062 196 aaKnown RBP6.9□□□□□ -1.31
USP46-207ENST00000508499 LSM10Q969L4 123 aaKnown RBP6.9□□□□□ -1.31
USP46-207ENST00000508499 SEC22AQ96IW7 307 aa6.9□□□□□ -1.31
USP46-207ENST00000508499 BET1LQ9NYM9 111 aa6.9□□□□□ -1.31
USP46-207ENST00000508499 ZNF580Q9UK33 172 aa6.9□□□□□ -1.31
USP46-207ENST00000508499 FLVCR2Q9UPI3 526 aa6.9□□□□□ -1.31
USP46-207ENST00000508499 MTORP42345 2549 aa6.89□□□□□ -1.31
USP46-207ENST00000508499 TRAV6A0A075B6T7 132 aa6.89□□□□□ -1.31
USP46-207ENST00000508499 MDFIC2A0A1B0GVS7 189 aa6.89□□□□□ -1.31
USP46-207ENST00000508499 MARCH11A6NNE9 402 aa6.89□□□□□ -1.31
USP46-207ENST00000508499 H7C2Y5 167 aa6.89□□□□□ -1.31
USP46-207ENST00000508499 NBR2O15453 112 aa6.89□□□□□ -1.31
USP46-207ENST00000508499 HOXA3O43365 443 aaPredicted RBP6.89□□□□□ -1.31
USP46-207ENST00000508499 CREBL2O60519 120 aaPredicted RBP6.89□□□□□ -1.31
USP46-207ENST00000508499 CRYZL1O95825 349 aa6.89□□□□□ -1.31
USP46-207ENST00000508499 IGKV1-39P01597 117 aa6.89□□□□□ -1.31
USP46-207ENST00000508499 IGKV1D-39P04432 117 aa6.89□□□□□ -1.31
USP46-207ENST00000508499 SERPINE2P07093 398 aa6.89□□□□□ -1.31
USP46-207ENST00000508499 SLC25A6P12236 298 aa6.89□□□□□ -1.31
USP46-207ENST00000508499 TMEM11P17152 192 aa6.89□□□□□ -1.31
USP46-207ENST00000508499 AKR1C4P17516 323 aa6.89□□□□□ -1.31
USP46-207ENST00000508499 HLA-GP17693 338 aa6.89□□□□□ -1.31
USP46-207ENST00000508499 VDAC1P21796 283 aa6.89□□□□□ -1.31
USP46-207ENST00000508499 SLC9A3R2Q15599 337 aa6.89□□□□□ -1.31
USP46-207ENST00000508499 TRIM16LQ309B1 348 aa6.89□□□□□ -1.31
USP46-207ENST00000508499 PUSL1Q8N0Z8 303 aaKnown RBP6.89□□□□□ -1.31
USP46-207ENST00000508499 LGI3Q8N145 548 aa6.89□□□□□ -1.31
USP46-207ENST00000508499 ZNF431Q8TF32 576 aaPredicted RBP6.89□□□□□ -1.31
USP46-207ENST00000508499 CAPSLQ8WWF8 208 aa6.89□□□□□ -1.31
USP46-207ENST00000508499 C22orf15Q8WYQ4 148 aa6.89□□□□□ -1.31
USP46-207ENST00000508499 RHOVQ96L33 236 aa6.89□□□□□ -1.31
USP46-207ENST00000508499 GPHA2Q96T91 129 aa6.89□□□□□ -1.31
USP46-207ENST00000508499 RANBP3Q9H6Z4 567 aaPredicted RBP6.89□□□□□ -1.31
USP46-207ENST00000508499 GPN1Q9HCN4 374 aaPredicted RBP6.89□□□□□ -1.31
USP46-207ENST00000508499 COA4Q9NYJ1 87 aa6.89□□□□□ -1.31
USP46-207ENST00000508499 CACFD1Q9UGQ2 172 aa6.89□□□□□ -1.31
USP46-207ENST00000508499 MOB4Q9Y3A3 225 aa6.89□□□□□ -1.31
USP46-207ENST00000508499 SOX21Q9Y651 276 aaPredicted RBP6.89□□□□□ -1.31
USP46-207ENST00000508499 NIPBLQ6KC79 2804 aaeCLIP6.88□□□□□ -1.31
USP46-207ENST00000508499 SRRM4A7MD48 611 aaKnown RBP6.88□□□□□ -1.31
USP46-207ENST00000508499 RRHO14718 337 aa6.88□□□□□ -1.31
USP46-207ENST00000508499 SHOXO15266 292 aa6.88□□□□□ -1.31
USP46-207ENST00000508499 TCF21O43680 179 aa6.88□□□□□ -1.31
USP46-207ENST00000508499 HLA-DRB1P01911 266 aa6.88□□□□□ -1.31
USP46-207ENST00000508499 ANXA7P20073 488 aaKnown RBP6.88□□□□□ -1.31
USP46-207ENST00000508499 MAS1LP35410 378 aa6.88□□□□□ -1.31
USP46-207ENST00000508499 LPAR6P43657 344 aa6.88□□□□□ -1.31
USP46-207ENST00000508499 PSG5Q15238 335 aa6.88□□□□□ -1.31
USP46-207ENST00000508499 PDLIM3Q53GG5 364 aaPredicted RBP6.88□□□□□ -1.31
USP46-207ENST00000508499 Q71RC1 249 aaPredicted RBP6.88□□□□□ -1.31
USP46-207ENST00000508499 ZNF429Q86V71 674 aa6.88□□□□□ -1.31
USP46-207ENST00000508499 Q8N2B8 174 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 703.4 ms