RNA–Protein interactions for RNA: ENST00000507906.5

USP53-204, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 4

Gene USP53, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-204ENST00000507906 PMAIP1Q13794 54 aa1.88□□□□□ -2.11
USP53-204ENST00000507906 HES1Q14469 280 aa1.88□□□□□ -2.11
USP53-204ENST00000507906 HIST3H3Q16695 136 aa1.88□□□□□ -2.11
USP53-204ENST00000507906 TNFAIP8L3Q5GJ75 292 aa1.88□□□□□ -2.11
USP53-204ENST00000507906 CLDN22Q8N7P3 220 aa1.88□□□□□ -2.11
USP53-204ENST00000507906 OR1L8Q8NGR8 309 aa1.88□□□□□ -2.11
USP53-204ENST00000507906 CLDND2Q8NHS1 167 aa1.88□□□□□ -2.11
USP53-204ENST00000507906 C12orf43Q96C57 262 aaKnown RBP1.88□□□□□ -2.11
USP53-204ENST00000507906 C20orf166-AS1Q96NR2 134 aa1.88□□□□□ -2.11
USP53-204ENST00000507906 MAPKBP1O60336 1514 aa1.87□□□□□ -2.11
USP53-204ENST00000507906 IGKV3D-11A0A0A0MRZ8 115 aa1.87□□□□□ -2.11
USP53-204ENST00000507906 UBE2L6O14933 153 aa1.87□□□□□ -2.11
USP53-204ENST00000507906 PLA2G10O15496 165 aa1.87□□□□□ -2.11
USP53-204ENST00000507906 DSCAMO60469 2012 aa1.87□□□□□ -2.11
USP53-204ENST00000507906 RPP14O95059 124 aaKnown RBP1.87□□□□□ -2.11
USP53-204ENST00000507906 IGKV4-1P06312 121 aa1.87□□□□□ -2.11
USP53-204ENST00000507906 ALOX5APP20292 161 aa1.87□□□□□ -2.11
USP53-204ENST00000507906 CSRP1P21291 193 aaKnown RBP1.87□□□□□ -2.11
USP53-204ENST00000507906 CD200P41217 278 aa1.87□□□□□ -2.11
USP53-204ENST00000507906 GABRA2P47869 451 aa1.87□□□□□ -2.11
USP53-204ENST00000507906 MRPS15P82914 257 aaKnown RBP1.87□□□□□ -2.11
USP53-204ENST00000507906 KRTAP6-3Q3LI67 103 aa1.87□□□□□ -2.11
USP53-204ENST00000507906 LCE1CQ5T751 118 aa1.87□□□□□ -2.11
USP53-204ENST00000507906 LCE1BQ5T7P3 118 aa1.87□□□□□ -2.11
USP53-204ENST00000507906 CEP162Q5TB80 1403 aa1.87□□□□□ -2.11
USP53-204ENST00000507906 C5orf46Q6UWT4 87 aa1.87□□□□□ -2.11
USP53-204ENST00000507906 CCDC121Q6ZUS5 278 aa1.87□□□□□ -2.11
USP53-204ENST00000507906 FGF13Q92913 245 aa1.87□□□□□ -2.11
USP53-204ENST00000507906 ERMAPQ96PL5 475 aaPredicted RBP1.87□□□□□ -2.11
USP53-204ENST00000507906 PPP1R2P1Q96PQ5 205 aa1.87□□□□□ -2.11
USP53-204ENST00000507906 KIF21BO75037 1637 aa1.87□□□□□ -2.11
USP53-204ENST00000507906 SHROOM3Q8TF72 1996 aa1.87□□□□□ -2.11
USP53-204ENST00000507906 CTTNBP2Q8WZ74 1663 aa1.86□□□□□ -2.11
USP53-204ENST00000507906 SMIM9A6NGZ8 99 aa1.86□□□□□ -2.11
USP53-204ENST00000507906 C11orf86A6NJI1 115 aa1.86□□□□□ -2.11
USP53-204ENST00000507906 TRAPPC3O43617 180 aa1.86□□□□□ -2.11
USP53-204ENST00000507906 BLVRBP30043 206 aaPredicted RBP1.86□□□□□ -2.11
USP53-204ENST00000507906 GABRA4P48169 554 aa1.86□□□□□ -2.11
USP53-204ENST00000507906 SULT1A1P50225 295 aa1.86□□□□□ -2.11
USP53-204ENST00000507906 RBM11P57052 281 aaKnown RBP1.86□□□□□ -2.11
USP53-204ENST00000507906 TAS2R30P59541 319 aa1.86□□□□□ -2.11
USP53-204ENST00000507906 AP3S2P59780 193 aa1.86□□□□□ -2.11
USP53-204ENST00000507906 FKBP1AP62942 108 aaKnown RBP1.86□□□□□ -2.11
USP53-204ENST00000507906 HOXC5Q00444 222 aa1.86□□□□□ -2.11
USP53-204ENST00000507906 SS18Q15532 418 aa1.86□□□□□ -2.11
USP53-204ENST00000507906 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.86□□□□□ -2.11
USP53-204ENST00000507906 HIST2H3PS2Q5TEC6 136 aa1.86□□□□□ -2.11
USP53-204ENST00000507906 SMARCD3Q6STE5 483 aa1.86□□□□□ -2.11
USP53-204ENST00000507906 DGCR14Q96DF8 476 aaKnown RBP1.86□□□□□ -2.11
USP53-204ENST00000507906 IMP4Q96G21 291 aaKnown RBP1.86□□□□□ -2.11
USP53-204ENST00000507906 MND1Q9BWT6 205 aa1.86□□□□□ -2.11
USP53-204ENST00000507906 ZNF471Q9BX82 626 aaPredicted RBP1.86□□□□□ -2.11
USP53-204ENST00000507906 TAAR3PQ9P1P4 343 aa1.86□□□□□ -2.11
USP53-204ENST00000507906 PRELID1Q9Y255 219 aa1.86□□□□□ -2.11
USP53-204ENST00000507906 CCL26Q9Y258 94 aa1.86□□□□□ -2.11
USP53-204ENST00000507906 ZNF337Q9Y3M9 751 aa1.86□□□□□ -2.11
USP53-204ENST00000507906 LSM5Q9Y4Y9 91 aaKnown RBP1.86□□□□□ -2.11
USP53-204ENST00000507906 RBM7Q9Y580 266 aaKnown RBP1.86□□□□□ -2.11
USP53-204ENST00000507906 OTOFQ9HC10 1997 aa1.85□□□□□ -2.11
USP53-204ENST00000507906 IGHV1-69-2A0A0G2JMI3 117 aa1.85□□□□□ -2.11
USP53-204ENST00000507906 TMEM210A6NLX4 147 aa1.85□□□□□ -2.11
USP53-204ENST00000507906 UBFD1O14562 309 aaKnown RBP1.85□□□□□ -2.11
USP53-204ENST00000507906 NDUFB2O95178 105 aa1.85□□□□□ -2.11
USP53-204ENST00000507906 NSA2O95478 260 aaKnown RBP1.85□□□□□ -2.11
USP53-204ENST00000507906 KRT75O95678 551 aa1.85□□□□□ -2.11
USP53-204ENST00000507906 IFNA6P05013 189 aa1.85□□□□□ -2.11
USP53-204ENST00000507906 OR5G3P0C626 314 aa1.85□□□□□ -2.11
USP53-204ENST00000507906 FAM228BP0C875 321 aa1.85□□□□□ -2.11
USP53-204ENST00000507906 ZNF728P0DKX0 622 aa1.85□□□□□ -2.11
USP53-204ENST00000507906 GZMBP10144 247 aa1.85□□□□□ -2.11
USP53-204ENST00000507906 RPL27AP46776 148 aaKnown RBP1.85□□□□□ -2.11
USP53-204ENST00000507906 XCL1P47992 114 aa1.85□□□□□ -2.11
USP53-204ENST00000507906 DEFA1P59665 94 aa1.85□□□□□ -2.11
USP53-204ENST00000507906 CCL7P80098 99 aa1.85□□□□□ -2.11
USP53-204ENST00000507906 STX5Q13190 355 aa1.85□□□□□ -2.11
USP53-204ENST00000507906 BATFQ16520 125 aa1.85□□□□□ -2.11
USP53-204ENST00000507906 GUK1Q16774 197 aa1.85□□□□□ -2.11
USP53-204ENST00000507906 ACOT6Q3I5F7 207 aaPredicted RBP1.85□□□□□ -2.11
USP53-204ENST00000507906 TMPPEQ6ZT21 453 aa1.85□□□□□ -2.11
USP53-204ENST00000507906 SLC22A24Q8N4F4 322 aa1.85□□□□□ -2.11
USP53-204ENST00000507906 OR4C16Q8NGL9 310 aa1.85□□□□□ -2.11
USP53-204ENST00000507906 TMA16Q96EY4 203 aaKnown RBP1.85□□□□□ -2.11
USP53-204ENST00000507906 LRRC19Q9H756 370 aa1.85□□□□□ -2.11
USP53-204ENST00000507906 GPR84Q9NQS5 396 aa1.85□□□□□ -2.11
USP53-204ENST00000507906 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.85□□□□□ -2.11
USP53-204ENST00000507906 FKBP14Q9NWM8 211 aa1.85□□□□□ -2.11
USP53-204ENST00000507906 VPS29Q9UBQ0 182 aa1.85□□□□□ -2.11
USP53-204ENST00000507906 SLC22A13Q9Y226 551 aa1.85□□□□□ -2.11
USP53-204ENST00000507906 WDR90Q96KV7 1748 aa1.85□□□□□ -2.11
USP53-204ENST00000507906 UNC13AQ9UPW8 1703 aa1.85□□□□□ -2.11
USP53-204ENST00000507906 ADGRB3O60242 1522 aa1.85□□□□□ -2.11
USP53-204ENST00000507906 SLIT2O94813 1529 aa1.85□□□□□ -2.11
USP53-204ENST00000507906 SYNJ1O43426 1573 aa1.85□□□□□ -2.11
USP53-204ENST00000507906 ABCC8Q09428 1581 aa1.85□□□□□ -2.11
USP53-204ENST00000507906 MTUS2Q5JR59 1369 aa1.85□□□□□ -2.11
USP53-204ENST00000507906 LTBP2Q14767 1821 aa1.84□□□□□ -2.11
USP53-204ENST00000507906 HECW1Q76N89 1606 aa1.84□□□□□ -2.11
USP53-204ENST00000507906 CCDC144AA2RUR9 1427 aa1.84□□□□□ -2.11
USP53-204ENST00000507906 NLRC5Q86WI3 1866 aa1.84□□□□□ -2.11
USP53-204ENST00000507906 NCOA2Q15596 1464 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms