RNA–Protein interactions for RNA: ENST00000507678.5

SPCS3-203, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 2,655 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-203ENST00000507678 RAB29O14966 203 aa18.26■□□□□ 0.51
SPCS3-203ENST00000507678 SERF2P84101 59 aa18.26■□□□□ 0.51
SPCS3-203ENST00000507678 HTD2P86397 168 aa18.26■□□□□ 0.51
SPCS3-203ENST00000507678 PRAMEF5Q5TYX0 476 aa18.26■□□□□ 0.51
SPCS3-203ENST00000507678 PPP1R35Q8TAP8 253 aa18.26■□□□□ 0.51
SPCS3-203ENST00000507678 TVP23CQ96ET8 276 aa18.26■□□□□ 0.51
SPCS3-203ENST00000507678 KALRNO60229 2985 aa18.26■□□□□ 0.51
SPCS3-203ENST00000507678 TCAPO15273 167 aa18.26■□□□□ 0.51
SPCS3-203ENST00000507678 SPNS3Q6ZMD2 512 aa18.26■□□□□ 0.51
SPCS3-203ENST00000507678 KDF1Q8NAX2 398 aaPredicted RBP18.26■□□□□ 0.51
SPCS3-203ENST00000507678 DSCAMO60469 2012 aa18.26■□□□□ 0.51
SPCS3-203ENST00000507678 A0A1B0GWJ7 208 aa18.26■□□□□ 0.51
SPCS3-203ENST00000507678 NKX6-1P78426 367 aaPredicted RBP18.25■□□□□ 0.51
SPCS3-203ENST00000507678 HEPN1Q6WQI6 88 aa18.25■□□□□ 0.51
SPCS3-203ENST00000507678 C1QL4Q86Z23 238 aa18.25■□□□□ 0.51
SPCS3-203ENST00000507678 ZCCHC24Q8N2G6 241 aaKnown RBP18.25■□□□□ 0.51
SPCS3-203ENST00000507678 NEU1Q99519 415 aa18.25■□□□□ 0.51
SPCS3-203ENST00000507678 GPR61Q9BZJ8 451 aa18.25■□□□□ 0.51
SPCS3-203ENST00000507678 HCFC1P51610 2035 aa18.25■□□□□ 0.51
SPCS3-203ENST00000507678 SMCO3A2RU48 225 aa18.25■□□□□ 0.51
SPCS3-203ENST00000507678 USF2Q15853 346 aaPredicted RBP18.25■□□□□ 0.51
SPCS3-203ENST00000507678 TMEM147Q9BVK8 224 aa18.25■□□□□ 0.51
SPCS3-203ENST00000507678 CALYQ9NYX4 217 aa18.25■□□□□ 0.51
SPCS3-203ENST00000507678 TRAV1-1A0A0B4J248 108 aa18.24■□□□□ 0.51
SPCS3-203ENST00000507678 TNFAIP6P98066 277 aaPredicted RBP18.24■□□□□ 0.51
SPCS3-203ENST00000507678 FFAR4Q5NUL3 377 aa18.24■□□□□ 0.51
SPCS3-203ENST00000507678 C1orf229Q6ZS94 237 aaPredicted RBP18.24■□□□□ 0.51
SPCS3-203ENST00000507678 FAM169BQ8N8A8 192 aa18.24■□□□□ 0.51
SPCS3-203ENST00000507678 TRAV3A0A0B4J244 114 aa18.24■□□□□ 0.51
SPCS3-203ENST00000507678 RTP5Q14D33 572 aa18.24■□□□□ 0.51
SPCS3-203ENST00000507678 ZNF674Q2M3X9 581 aa18.24■□□□□ 0.51
SPCS3-203ENST00000507678 TRAT1Q6PIZ9 186 aa18.24■□□□□ 0.51
SPCS3-203ENST00000507678 C1orf174Q8IYL3 243 aa18.24■□□□□ 0.51
SPCS3-203ENST00000507678 Q8TCH9 128 aa18.24■□□□□ 0.51
SPCS3-203ENST00000507678 SNRNP40Q96DI7 357 aaKnown RBP18.24■□□□□ 0.51
SPCS3-203ENST00000507678 CRYABP02511 175 aaKnown RBP18.23■□□□□ 0.51
SPCS3-203ENST00000507678 GNG10P50151 68 aa18.23■□□□□ 0.51
SPCS3-203ENST00000507678 LOXL3P58215 753 aa18.23■□□□□ 0.51
SPCS3-203ENST00000507678 PKIAP61925 76 aa18.23■□□□□ 0.51
SPCS3-203ENST00000507678 FAM90A2PQ658T7 463 aa18.23■□□□□ 0.51
SPCS3-203ENST00000507678 OR4A16Q8NH70 328 aa18.23■□□□□ 0.51
SPCS3-203ENST00000507678 MBD3L1Q8WWY6 194 aa18.23■□□□□ 0.51
SPCS3-203ENST00000507678 CCL13Q99616 98 aa18.23■□□□□ 0.51
SPCS3-203ENST00000507678 GCM1Q9NP62 436 aa18.23■□□□□ 0.51
SPCS3-203ENST00000507678 JPT1Q9UK76 154 aa18.23■□□□□ 0.51
SPCS3-203ENST00000507678 LAMP3Q9UQV4 416 aa18.23■□□□□ 0.51
SPCS3-203ENST00000507678 PKDREJQ9NTG1 2253 aa18.23■□□□□ 0.51
SPCS3-203ENST00000507678 YLPM1P49750 1951 aaKnown RBP18.23■□□□□ 0.51
SPCS3-203ENST00000507678 PMS2P5A8MQ11 134 aa18.23■□□□□ 0.51
SPCS3-203ENST00000507678 TSTD3H0UI37 97 aa18.23■□□□□ 0.51
SPCS3-203ENST00000507678 GYPAP02724 150 aa18.23■□□□□ 0.51
SPCS3-203ENST00000507678 SELENOVP59797 346 aa18.23■□□□□ 0.51
SPCS3-203ENST00000507678 CCL8P80075 99 aa18.23■□□□□ 0.51
SPCS3-203ENST00000507678 GATAD1Q8WUU5 269 aa18.23■□□□□ 0.51
SPCS3-203ENST00000507678 PINX1Q96BK5 328 aaKnown RBP18.23■□□□□ 0.51
SPCS3-203ENST00000507678 IFNA10P01566 189 aa18.22■□□□□ 0.51
SPCS3-203ENST00000507678 TIMP3P35625 211 aa18.22■□□□□ 0.51
SPCS3-203ENST00000507678 RELQ04864 619 aaPredicted RBP18.22■□□□□ 0.51
SPCS3-203ENST00000507678 WFDC8Q8IUA0 241 aa18.22■□□□□ 0.51
SPCS3-203ENST00000507678 CISD2Q8N5K1 135 aaKnown RBP18.22■□□□□ 0.51
SPCS3-203ENST00000507678 OR10G4Q8NGN3 311 aa18.22■□□□□ 0.51
SPCS3-203ENST00000507678 OR10G9Q8NGN4 311 aa18.22■□□□□ 0.51
SPCS3-203ENST00000507678 OR10G7Q8NGN6 311 aa18.22■□□□□ 0.51
SPCS3-203ENST00000507678 CISD1Q9NZ45 108 aaKnown RBP18.22■□□□□ 0.51
SPCS3-203ENST00000507678 CEP295Q9C0D2 2601 aa18.22■□□□□ 0.51
SPCS3-203ENST00000507678 IGHV1-46P01743 117 aa18.22■□□□□ 0.51
SPCS3-203ENST00000507678 SOD3P08294 240 aa18.22■□□□□ 0.51
SPCS3-203ENST00000507678 SFTPCP11686 197 aa18.22■□□□□ 0.51
SPCS3-203ENST00000507678 ERVFRD-1P60508 538 aa18.22■□□□□ 0.51
SPCS3-203ENST00000507678 FAM90A1Q86YD7 464 aa18.22■□□□□ 0.51
SPCS3-203ENST00000507678 FAM216BQ8N7L0 139 aa18.22■□□□□ 0.51
SPCS3-203ENST00000507678 ZNF709Q8N972 641 aa18.22■□□□□ 0.51
SPCS3-203ENST00000507678 S1PR3Q99500 378 aa18.22■□□□□ 0.51
SPCS3-203ENST00000507678 IFI27L2Q9H2X8 130 aa18.22■□□□□ 0.51
SPCS3-203ENST00000507678 A8MXE2 369 aa18.21■□□□□ 0.51
SPCS3-203ENST00000507678 Q8WTZ3 238 aa18.21■□□□□ 0.51
SPCS3-203ENST00000507678 ABHD17AQ96GS6 310 aa18.21■□□□□ 0.51
SPCS3-203ENST00000507678 CIB3Q96Q77 187 aaPredicted RBP18.21■□□□□ 0.51
SPCS3-203ENST00000507678 C2orf88Q9BSF0 95 aa18.21■□□□□ 0.51
SPCS3-203ENST00000507678 SNRPCP09234 159 aaKnown RBP18.21■□□□□ 0.51
SPCS3-203ENST00000507678 CXCL1P09341 107 aa18.21■□□□□ 0.51
SPCS3-203ENST00000507678 CD40P25942 277 aa18.21■□□□□ 0.51
SPCS3-203ENST00000507678 SFXN3Q9BWM7 321 aa18.21■□□□□ 0.51
SPCS3-203ENST00000507678 NPCDR1Q9BY65 106 aa18.21■□□□□ 0.51
SPCS3-203ENST00000507678 HEYLQ9NQ87 328 aaPredicted RBP18.21■□□□□ 0.51
SPCS3-203ENST00000507678 RNF7Q9UBF6 113 aa18.21■□□□□ 0.51
SPCS3-203ENST00000507678 TGIF2-C20orf24A0A0A6YYL0 155 aa18.2■□□□□ 0.5
SPCS3-203ENST00000507678 YPEL1O60688 119 aa18.2■□□□□ 0.5
SPCS3-203ENST00000507678 FAM57AQ8TBR7 257 aa18.2■□□□□ 0.5
SPCS3-203ENST00000507678 YPEL4Q96NS1 127 aa18.2■□□□□ 0.5
SPCS3-203ENST00000507678 YPEL2Q96QA6 119 aa18.2■□□□□ 0.5
SPCS3-203ENST00000507678 OR6C3Q9NZP0 311 aa18.2■□□□□ 0.5
SPCS3-203ENST00000507678 ZNRD1Q9P1U0 126 aa18.2■□□□□ 0.5
SPCS3-203ENST00000507678 C15orf62A8K5M9 175 aa18.2■□□□□ 0.5
SPCS3-203ENST00000507678 HPRT1P00492 218 aa18.2■□□□□ 0.5
SPCS3-203ENST00000507678 LHBP01229 141 aa18.2■□□□□ 0.5
SPCS3-203ENST00000507678 ERVK-16P61578 105 aa18.2■□□□□ 0.5
SPCS3-203ENST00000507678 GCSAMLQ5JQS6 135 aa18.2■□□□□ 0.5
SPCS3-203ENST00000507678 LYG1Q8N1E2 194 aa18.2■□□□□ 0.5
SPCS3-203ENST00000507678 VAX2Q9UIW0 290 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms