RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 TMEM88Q6PEY1 159 aa5.1□□□□□ -1.59
VCAN-207ENST00000507162 CYP2R1Q6VVX0 501 aa5.1□□□□□ -1.59
VCAN-207ENST00000507162 HACD2Q6Y1H2 254 aa5.1□□□□□ -1.59
VCAN-207ENST00000507162 OR51A2Q8NGJ7 313 aa5.1□□□□□ -1.59
VCAN-207ENST00000507162 ZNRF2Q8NHG8 242 aa5.1□□□□□ -1.59
VCAN-207ENST00000507162 FANCD2OSQ96PS1 177 aa5.1□□□□□ -1.59
VCAN-207ENST00000507162 C11orf54Q9H0W9 315 aaPredicted RBP5.1□□□□□ -1.59
VCAN-207ENST00000507162 TMEM14BQ9NUH8 114 aa5.1□□□□□ -1.59
VCAN-207ENST00000507162 LRP2P98164 4655 aa5.1□□□□□ -1.59
VCAN-207ENST00000507162 IGHV3-49A0A0A0MS15 119 aa5.09□□□□□ -1.59
VCAN-207ENST00000507162 HMGB1P1B2RPK0 211 aaPredicted RBP5.09□□□□□ -1.59
VCAN-207ENST00000507162 DNASE2O00115 360 aaPredicted RBP5.09□□□□□ -1.59
VCAN-207ENST00000507162 CA11O75493 328 aa5.09□□□□□ -1.59
VCAN-207ENST00000507162 PRKACGP22612 351 aa5.09□□□□□ -1.59
VCAN-207ENST00000507162 SOX2P48431 317 aa5.09□□□□□ -1.59
VCAN-207ENST00000507162 CBX3Q13185 183 aa5.09□□□□□ -1.59
VCAN-207ENST00000507162 C10orf55Q5SWW7 151 aa5.09□□□□□ -1.59
VCAN-207ENST00000507162 MORN3Q6PF18 240 aaPredicted RBP5.09□□□□□ -1.59
VCAN-207ENST00000507162 CEACAM19Q7Z692 300 aa5.09□□□□□ -1.59
VCAN-207ENST00000507162 TEX45Q8NA69 505 aa5.09□□□□□ -1.59
VCAN-207ENST00000507162 SETD6Q8TBK2 473 aa5.09□□□□□ -1.59
VCAN-207ENST00000507162 MRPL30Q8TCC3 161 aaKnown RBP5.09□□□□□ -1.59
VCAN-207ENST00000507162 FYTTD1Q96QD9 318 aaKnown RBP5.09□□□□□ -1.59
VCAN-207ENST00000507162 RNF2Q99496 336 aa5.09□□□□□ -1.59
VCAN-207ENST00000507162 AGMATQ9BSE5 352 aa5.09□□□□□ -1.59
VCAN-207ENST00000507162 JAM3Q9BX67 310 aa5.09□□□□□ -1.59
VCAN-207ENST00000507162 DAZ1Q9NQZ3 744 aaKnown RBP5.09□□□□□ -1.59
VCAN-207ENST00000507162 PAK1IP1Q9NWT1 392 aaPredicted RBP5.09□□□□□ -1.59
VCAN-207ENST00000507162 ZNF257Q9Y2Q1 563 aa5.09□□□□□ -1.59
VCAN-207ENST00000507162 TRBV7-1A0A0A6YYK4 115 aa5.08□□□□□ -1.6
VCAN-207ENST00000507162 MFSD2BA6NFX1 497 aa5.08□□□□□ -1.6
VCAN-207ENST00000507162 REG1AP05451 166 aa5.08□□□□□ -1.6
VCAN-207ENST00000507162 DEFA4P12838 97 aa5.08□□□□□ -1.6
VCAN-207ENST00000507162 NAT1P18440 290 aa5.08□□□□□ -1.6
VCAN-207ENST00000507162 PSMB6P28072 239 aa5.08□□□□□ -1.6
VCAN-207ENST00000507162 CAPGP40121 348 aa5.08□□□□□ -1.6
VCAN-207ENST00000507162 SNRPGP62308 76 aaKnown RBP5.08□□□□□ -1.6
VCAN-207ENST00000507162 PAFAH1B2P68402 229 aa5.08□□□□□ -1.6
VCAN-207ENST00000507162 ZNF85Q03923 595 aa5.08□□□□□ -1.6
VCAN-207ENST00000507162 PLA2G7Q13093 441 aa5.08□□□□□ -1.6
VCAN-207ENST00000507162 TMEM41BQ5BJD5 291 aa5.08□□□□□ -1.6
VCAN-207ENST00000507162 AADACL4Q5VUY2 407 aa5.08□□□□□ -1.6
VCAN-207ENST00000507162 NXNL2Q5VZ03 156 aa5.08□□□□□ -1.6
VCAN-207ENST00000507162 ZNF66Q6ZN08 573 aa5.08□□□□□ -1.6
VCAN-207ENST00000507162 ZNF554Q86TJ5 538 aa5.08□□□□□ -1.6
VCAN-207ENST00000507162 GAPTQ8N292 157 aa5.08□□□□□ -1.6
VCAN-207ENST00000507162 PARP16Q8N5Y8 322 aa5.08□□□□□ -1.6
VCAN-207ENST00000507162 DEFB104AQ8WTQ1 72 aa5.08□□□□□ -1.6
VCAN-207ENST00000507162 CMTM3Q96MX0 182 aa5.08□□□□□ -1.6
VCAN-207ENST00000507162 IL4I1Q96RQ9 567 aa5.08□□□□□ -1.6
VCAN-207ENST00000507162 ZNF436Q9C0F3 470 aaPredicted RBP5.08□□□□□ -1.6
VCAN-207ENST00000507162 BANF2Q9H503 90 aa5.08□□□□□ -1.6
VCAN-207ENST00000507162 ISG20L2Q9H9L3 353 aaKnown RBP5.08□□□□□ -1.6
VCAN-207ENST00000507162 IL36GQ9NZH8 169 aa5.08□□□□□ -1.6
VCAN-207ENST00000507162 AASSQ9UDR5 926 aa5.08□□□□□ -1.6
VCAN-207ENST00000507162 ETV7Q9Y603 341 aa5.08□□□□□ -1.6
VCAN-207ENST00000507162 IGHV3OR16-13A0A075B7E8 117 aa5.07□□□□□ -1.6
VCAN-207ENST00000507162 IGHV3-74A0A0B4J1X5 117 aa5.07□□□□□ -1.6
VCAN-207ENST00000507162 RPS10-NUDT3A0A1W2PQS6 291 aa5.07□□□□□ -1.6
VCAN-207ENST00000507162 OR4C45A6NMZ5 311 aa5.07□□□□□ -1.6
VCAN-207ENST00000507162 KNCNA6PVL3 124 aa5.07□□□□□ -1.6
VCAN-207ENST00000507162 J3QLW9 94 aa5.07□□□□□ -1.6
VCAN-207ENST00000507162 DYNC1I1O14576 645 aa5.07□□□□□ -1.6
VCAN-207ENST00000507162 GNGT2O14610 69 aa5.07□□□□□ -1.6
VCAN-207ENST00000507162 CCDC22O60826 627 aa5.07□□□□□ -1.6
VCAN-207ENST00000507162 ZNF780AO75290 641 aaPredicted RBP5.07□□□□□ -1.6
VCAN-207ENST00000507162 NUDT3O95989 172 aa5.07□□□□□ -1.6
VCAN-207ENST00000507162 PLA2G1BP04054 148 aaKnown RBP5.07□□□□□ -1.6
VCAN-207ENST00000507162 RPSAP08865 295 aaKnown RBP5.07□□□□□ -1.6
VCAN-207ENST00000507162 HSD17B1P14061 328 aa5.07□□□□□ -1.6
VCAN-207ENST00000507162 ZNF19P17023 458 aa5.07□□□□□ -1.6
VCAN-207ENST00000507162 C4BPBP20851 252 aa5.07□□□□□ -1.6
VCAN-207ENST00000507162 ZNF93P35789 620 aaPredicted RBP5.07□□□□□ -1.6
VCAN-207ENST00000507162 CCR9P51686 369 aa5.07□□□□□ -1.6
VCAN-207ENST00000507162 CCL18P55774 89 aa5.07□□□□□ -1.6
VCAN-207ENST00000507162 UBE2KP61086 200 aa5.07□□□□□ -1.6
VCAN-207ENST00000507162 PTGES3Q15185 160 aaKnown RBP5.07□□□□□ -1.6
VCAN-207ENST00000507162 HMGN3Q15651 99 aa5.07□□□□□ -1.6
VCAN-207ENST00000507162 HS3ST5Q8IZT8 346 aa5.07□□□□□ -1.6
VCAN-207ENST00000507162 MFSD4AQ8N468 514 aa5.07□□□□□ -1.6
VCAN-207ENST00000507162 TMEM190Q8WZ59 177 aa5.07□□□□□ -1.6
VCAN-207ENST00000507162 CXorf58Q96LI9 332 aa5.07□□□□□ -1.6
VCAN-207ENST00000507162 OR2A7Q96R45 310 aa5.07□□□□□ -1.6
VCAN-207ENST00000507162 NIPSNAP3BQ9BS92 247 aa5.07□□□□□ -1.6
VCAN-207ENST00000507162 RHPN1-AS1Q9BWJ2 59 aa5.07□□□□□ -1.6
VCAN-207ENST00000507162 ZNF430Q9H8G1 570 aaPredicted RBP5.07□□□□□ -1.6
VCAN-207ENST00000507162 Q9H8V8 135 aa5.07□□□□□ -1.6
VCAN-207ENST00000507162 CHMP1AQ9HD42 196 aaPredicted RBP5.07□□□□□ -1.6
VCAN-207ENST00000507162 SMPD3Q9NY59 655 aaPredicted RBP5.07□□□□□ -1.6
VCAN-207ENST00000507162 TAS2R4Q9NYW5 299 aa5.07□□□□□ -1.6
VCAN-207ENST00000507162 PRR13Q9NZ81 148 aa5.07□□□□□ -1.6
VCAN-207ENST00000507162 OR1A1Q9P1Q5 309 aa5.07□□□□□ -1.6
VCAN-207ENST00000507162 WARS2Q9UGM6 360 aaKnown RBP5.07□□□□□ -1.6
VCAN-207ENST00000507162 SMPXQ9UHP9 88 aa5.07□□□□□ -1.6
VCAN-207ENST00000507162 TAGLN3Q9UI15 199 aa5.07□□□□□ -1.6
VCAN-207ENST00000507162 TRBV5-7A0A0A0MS05 114 aa5.06□□□□□ -1.6
VCAN-207ENST00000507162 OR2T8A6NH00 312 aa5.06□□□□□ -1.6
VCAN-207ENST00000507162 NPIPB5A8MRT5 1133 aa5.06□□□□□ -1.6
VCAN-207ENST00000507162 CHEK1O14757 476 aa5.06□□□□□ -1.6
VCAN-207ENST00000507162 SC5DO75845 299 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 136.3 ms