RNA–Protein interactions for RNA: ENST00000506941.1

NPHP4-210, Transcript of nephrocystin 4, humanhuman

TSL 4

Gene NPHP4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-210ENST00000506941 PYDC2Q56P42 97 aa14.26□□□□□ -0.13
NPHP4-210ENST00000506941 C19orf54Q5BKX5 351 aa14.26□□□□□ -0.13
NPHP4-210ENST00000506941 VKORC1L1Q8N0U8 176 aa14.26□□□□□ -0.13
NPHP4-210ENST00000506941 SPAG16Q8N0X2 631 aa14.26□□□□□ -0.13
NPHP4-210ENST00000506941 OR4X2Q8NGF9 303 aa14.26□□□□□ -0.13
NPHP4-210ENST00000506941 OR4C16Q8NGL9 310 aa14.26□□□□□ -0.13
NPHP4-210ENST00000506941 TRIM63Q969Q1 353 aa14.26□□□□□ -0.13
NPHP4-210ENST00000506941 MRGPRFQ96AM1 343 aa14.26□□□□□ -0.13
NPHP4-210ENST00000506941 WSB1Q9Y6I7 421 aa14.26□□□□□ -0.13
NPHP4-210ENST00000506941 MGAM2Q2M2H8 2515 aa14.26□□□□□ -0.13
NPHP4-210ENST00000506941 RBFOX2O43251 390 aaKnown RBP eCLIP14.25□□□□□ -0.13
NPHP4-210ENST00000506941 AKAIN1P0CW23 69 aa14.25□□□□□ -0.13
NPHP4-210ENST00000506941 VDAC1P21796 283 aa14.25□□□□□ -0.13
NPHP4-210ENST00000506941 CRIP2P52943 208 aaPredicted RBP14.25□□□□□ -0.13
NPHP4-210ENST00000506941 PPP5CP53041 499 aa14.25□□□□□ -0.13
NPHP4-210ENST00000506941 SLC35B1P78383 322 aa14.25□□□□□ -0.13
NPHP4-210ENST00000506941 C2orf68Q2NKX9 166 aa14.25□□□□□ -0.13
NPHP4-210ENST00000506941 VMA21Q3ZAQ7 101 aa14.25□□□□□ -0.13
NPHP4-210ENST00000506941 ZNF562Q6V9R5 426 aa14.25□□□□□ -0.13
NPHP4-210ENST00000506941 NDUFA11Q86Y39 141 aa14.25□□□□□ -0.13
NPHP4-210ENST00000506941 SLC38A6Q8IZM9 456 aa14.25□□□□□ -0.13
NPHP4-210ENST00000506941 TEX45Q8NA69 505 aa14.25□□□□□ -0.13
NPHP4-210ENST00000506941 THAP7Q9BT49 309 aaPredicted RBP14.25□□□□□ -0.13
NPHP4-210ENST00000506941 FAM103A1Q9BTL3 118 aaKnown RBP14.25□□□□□ -0.13
NPHP4-210ENST00000506941 A0A1W2PRX2 142 aa14.24□□□□□ -0.13
NPHP4-210ENST00000506941 TCRBV4S1A1TA0A5B7 111 aa14.24□□□□□ -0.13
NPHP4-210ENST00000506941 PTBP1P26599 531 aaKnown RBP eCLIP14.24□□□□□ -0.13
NPHP4-210ENST00000506941 PPIFP30405 207 aaKnown RBP14.24□□□□□ -0.13
NPHP4-210ENST00000506941 MEF2DQ14814 521 aa14.24□□□□□ -0.13
NPHP4-210ENST00000506941 SCGB2B2Q4G0G5 96 aa14.24□□□□□ -0.13
NPHP4-210ENST00000506941 SPANXN2Q5MJ10 180 aa14.24□□□□□ -0.13
NPHP4-210ENST00000506941 LPCAT3Q6P1A2 487 aa14.24□□□□□ -0.13
NPHP4-210ENST00000506941 LCNL1Q6ZST4 164 aa14.24□□□□□ -0.13
NPHP4-210ENST00000506941 CMTM1Q8IZ96 169 aa14.24□□□□□ -0.13
NPHP4-210ENST00000506941 Q8N402 240 aa14.24□□□□□ -0.13
NPHP4-210ENST00000506941 TERB2Q8NHR7 220 aa14.24□□□□□ -0.13
NPHP4-210ENST00000506941 GON7Q9BXV9 100 aa14.24□□□□□ -0.13
NPHP4-210ENST00000506941 FBN3Q75N90 2809 aa14.24□□□□□ -0.13
NPHP4-210ENST00000506941 TRAV41A0A0B4J266 112 aa14.23□□□□□ -0.13
NPHP4-210ENST00000506941 IGHG4P01861 327 aa14.23□□□□□ -0.13
NPHP4-210ENST00000506941 PI3P19957 117 aa14.23□□□□□ -0.13
NPHP4-210ENST00000506941 GNB1P62873 340 aa14.23□□□□□ -0.13
NPHP4-210ENST00000506941 FXYD3Q14802 87 aa14.23□□□□□ -0.13
NPHP4-210ENST00000506941 PRSS8Q16651 343 aa14.23□□□□□ -0.13
NPHP4-210ENST00000506941 ECSCRQ19T08 205 aa14.23□□□□□ -0.13
NPHP4-210ENST00000506941 PUSL1Q8N0Z8 303 aaKnown RBP14.23□□□□□ -0.13
NPHP4-210ENST00000506941 GRPEL2Q8TAA5 225 aa14.23□□□□□ -0.13
NPHP4-210ENST00000506941 ABHD5Q8WTS1 349 aa14.23□□□□□ -0.13
NPHP4-210ENST00000506941 ARPC1AQ92747 370 aa14.23□□□□□ -0.13
NPHP4-210ENST00000506941 SRRQ9GZT4 340 aa14.23□□□□□ -0.13
NPHP4-210ENST00000506941 ZNF430Q9H8G1 570 aaPredicted RBP14.23□□□□□ -0.13
NPHP4-210ENST00000506941 SLC2A9Q9NRM0 540 aa14.23□□□□□ -0.13
NPHP4-210ENST00000506941 TSSC4Q9Y5U2 329 aaPredicted RBP14.23□□□□□ -0.13
NPHP4-210ENST00000506941 NUBP2Q9Y5Y2 271 aa14.23□□□□□ -0.13
NPHP4-210ENST00000506941 S1PR2O95136 353 aa14.22□□□□□ -0.13
NPHP4-210ENST00000506941 RPLP1P05386 114 aaKnown RBP14.22□□□□□ -0.13
NPHP4-210ENST00000506941 PGAM2P15259 253 aa14.22□□□□□ -0.13
NPHP4-210ENST00000506941 F2RP25116 425 aa14.22□□□□□ -0.13
NPHP4-210ENST00000506941 FOXE3Q13461 319 aa14.22□□□□□ -0.13
NPHP4-210ENST00000506941 KLF9Q13886 244 aaPredicted RBP14.22□□□□□ -0.13
NPHP4-210ENST00000506941 KHDC1LQ5JSQ8 128 aa14.22□□□□□ -0.13
NPHP4-210ENST00000506941 TEX38Q6PEX7 206 aa14.22□□□□□ -0.13
NPHP4-210ENST00000506941 SSX9Q7RTT3 188 aa14.22□□□□□ -0.13
NPHP4-210ENST00000506941 TBC1D26Q86UD7 250 aa14.22□□□□□ -0.13
NPHP4-210ENST00000506941 COMMD1Q8N668 190 aa14.22□□□□□ -0.13
NPHP4-210ENST00000506941 RNF152Q8N8N0 203 aa14.22□□□□□ -0.13
NPHP4-210ENST00000506941 MINDY2Q8NBR6 621 aa14.22□□□□□ -0.13
NPHP4-210ENST00000506941 OR13C8Q8NGS7 320 aa14.22□□□□□ -0.13
NPHP4-210ENST00000506941 MARCH1Q8TCQ1 289 aa14.22□□□□□ -0.13
NPHP4-210ENST00000506941 RHOVQ96L33 236 aa14.22□□□□□ -0.13
NPHP4-210ENST00000506941 DISC1C4P0D8 188 aa14.21□□□□□ -0.13
NPHP4-210ENST00000506941 SOX15O60248 233 aa14.21□□□□□ -0.13
NPHP4-210ENST00000506941 KBTBD11O94819 623 aa14.21□□□□□ -0.13
NPHP4-210ENST00000506941 CNIH1O95406 144 aa14.21□□□□□ -0.13
NPHP4-210ENST00000506941 HPRT1P00492 218 aa14.21□□□□□ -0.13
NPHP4-210ENST00000506941 HRASP01112 189 aa14.21□□□□□ -0.13
NPHP4-210ENST00000506941 IGLV1-40P01703 118 aa14.21□□□□□ -0.13
NPHP4-210ENST00000506941 OPN1MWP04001 364 aa14.21□□□□□ -0.13
NPHP4-210ENST00000506941 OPN1MW2P0DN77 364 aa14.21□□□□□ -0.13
NPHP4-210ENST00000506941 OPN1MW3P0DN78 364 aa14.21□□□□□ -0.13
NPHP4-210ENST00000506941 PSMB8P28062 276 aa14.21□□□□□ -0.13
NPHP4-210ENST00000506941 CNPY1Q3B7I2 92 aa14.21□□□□□ -0.13
NPHP4-210ENST00000506941 ZNF585BQ52M93 769 aa14.21□□□□□ -0.13
NPHP4-210ENST00000506941 TREML4Q6UXN2 200 aa14.21□□□□□ -0.13
NPHP4-210ENST00000506941 C18orf65Q6ZTR6 163 aa14.21□□□□□ -0.13
NPHP4-210ENST00000506941 POC5Q8NA72 575 aa14.21□□□□□ -0.13
NPHP4-210ENST00000506941 LFNGQ8NES3 379 aa14.21□□□□□ -0.13
NPHP4-210ENST00000506941 OR51S1Q8NGJ8 323 aa14.21□□□□□ -0.13
NPHP4-210ENST00000506941 CD300LFQ8TDQ1 290 aa14.21□□□□□ -0.13
NPHP4-210ENST00000506941 PLEKHA2Q9HB19 425 aa14.21□□□□□ -0.13
NPHP4-210ENST00000506941 OR2A4O95047 310 aa14.2□□□□□ -0.14
NPHP4-210ENST00000506941 ELANEP08246 267 aa14.2□□□□□ -0.14
NPHP4-210ENST00000506941 TAS2R31P59538 309 aa14.2□□□□□ -0.14
NPHP4-210ENST00000506941 RND3P61587 244 aa14.2□□□□□ -0.14
NPHP4-210ENST00000506941 RPL23AP62750 156 aaKnown RBP14.2□□□□□ -0.14
NPHP4-210ENST00000506941 TNXAQ16473 311 aa14.2□□□□□ -0.14
NPHP4-210ENST00000506941 POU2AF1Q16633 256 aa14.2□□□□□ -0.14
NPHP4-210ENST00000506941 C10orf55Q5SWW7 151 aa14.2□□□□□ -0.14
NPHP4-210ENST00000506941 OR4A47Q6IF82 309 aa14.2□□□□□ -0.14
NPHP4-210ENST00000506941 UNQ5815/PRO19632Q6UWF5 114 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms