RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 DCUN1D5Q9BTE7 237 aa13.9□□□□□ -0.19
SMN1-204ENST00000506163 FXYD6Q9H0Q3 95 aa13.9□□□□□ -0.19
SMN1-204ENST00000506163 MTFP1Q9UDX5 166 aa13.9□□□□□ -0.19
SMN1-204ENST00000506163 DNAH3Q8TD57 4116 aa13.89□□□□□ -0.19
SMN1-204ENST00000506163 A0A1W2PN81 502 aa13.89□□□□□ -0.19
SMN1-204ENST00000506163 SAA1P0DJI8 122 aaPredicted RBP13.89□□□□□ -0.19
SMN1-204ENST00000506163 CHRNA7P36544 502 aa13.89□□□□□ -0.19
SMN1-204ENST00000506163 RAB9AP51151 201 aa13.89□□□□□ -0.19
SMN1-204ENST00000506163 HERV-K104P61576 105 aa13.89□□□□□ -0.19
SMN1-204ENST00000506163 GNB1P62873 340 aa13.89□□□□□ -0.19
SMN1-204ENST00000506163 DEFB136Q30KP8 78 aa13.89□□□□□ -0.19
SMN1-204ENST00000506163 OXLD1Q5BKU9 147 aa13.89□□□□□ -0.19
SMN1-204ENST00000506163 UNQ5815/PRO19632Q6UWF5 114 aa13.89□□□□□ -0.19
SMN1-204ENST00000506163 OR6F1Q8NGZ6 308 aa13.89□□□□□ -0.19
SMN1-204ENST00000506163 RAX2Q96IS3 184 aa13.89□□□□□ -0.19
SMN1-204ENST00000506163 NUDT19A8MXV4 375 aa13.88□□□□□ -0.19
SMN1-204ENST00000506163 NOL3O60936 208 aaKnown RBP13.88□□□□□ -0.19
SMN1-204ENST00000506163 VMA21Q3ZAQ7 101 aa13.88□□□□□ -0.19
SMN1-204ENST00000506163 AKIRIN2Q53H80 203 aa13.88□□□□□ -0.19
SMN1-204ENST00000506163 SAMD5Q5TGI4 173 aa13.88□□□□□ -0.19
SMN1-204ENST00000506163 MRPL41Q8IXM3 137 aaKnown RBP13.88□□□□□ -0.19
SMN1-204ENST00000506163 LINC00482Q8N8I6 264 aa13.88□□□□□ -0.19
SMN1-204ENST00000506163 ZNF491Q8N8L2 437 aa13.88□□□□□ -0.19
SMN1-204ENST00000506163 OR4S2Q8NH73 311 aa13.88□□□□□ -0.19
SMN1-204ENST00000506163 DIRAS2Q96HU8 199 aa13.88□□□□□ -0.19
SMN1-204ENST00000506163 P2RX4Q99571 388 aa13.88□□□□□ -0.19
SMN1-204ENST00000506163 SOSTQ9BQB4 213 aa13.88□□□□□ -0.19
SMN1-204ENST00000506163 TINAGL1Q9GZM7 467 aaPredicted RBP13.88□□□□□ -0.19
SMN1-204ENST00000506163 C6orf62Q9GZU0 229 aaPredicted RBP13.88□□□□□ -0.19
SMN1-204ENST00000506163 ZNF430Q9H8G1 570 aaPredicted RBP13.88□□□□□ -0.19
SMN1-204ENST00000506163 GNB4Q9HAV0 340 aa13.88□□□□□ -0.19
SMN1-204ENST00000506163 PGLYRP1O75594 196 aaPredicted RBP13.87□□□□□ -0.19
SMN1-204ENST00000506163 CNIH1O95406 144 aa13.87□□□□□ -0.19
SMN1-204ENST00000506163 CD3DP04234 171 aa13.87□□□□□ -0.19
SMN1-204ENST00000506163 ACTBL2Q562R1 376 aa13.87□□□□□ -0.19
SMN1-204ENST00000506163 VAX1Q5SQQ9 334 aa13.87□□□□□ -0.19
SMN1-204ENST00000506163 AADACL3Q5VUY0 350 aa13.87□□□□□ -0.19
SMN1-204ENST00000506163 SPAG16Q8N0X2 631 aa13.87□□□□□ -0.19
SMN1-204ENST00000506163 OR4D10Q8NGI6 311 aa13.87□□□□□ -0.19
SMN1-204ENST00000506163 OR51H1Q8NH63 302 aa13.87□□□□□ -0.19
SMN1-204ENST00000506163 FOXA2Q9Y261 457 aaPredicted RBP13.87□□□□□ -0.19
SMN1-204ENST00000506163 PF4P02776 101 aa13.86□□□□□ -0.19
SMN1-204ENST00000506163 IGLL1P15814 213 aa13.86□□□□□ -0.19
SMN1-204ENST00000506163 TNFSF8P32971 234 aa13.86□□□□□ -0.19
SMN1-204ENST00000506163 DEFA6Q01524 100 aa13.86□□□□□ -0.19
SMN1-204ENST00000506163 TMEM267Q0VDI3 215 aaPredicted RBP13.86□□□□□ -0.19
SMN1-204ENST00000506163 C10orf55Q5SWW7 151 aa13.86□□□□□ -0.19
SMN1-204ENST00000506163 PUSL1Q8N0Z8 303 aaKnown RBP13.86□□□□□ -0.19
SMN1-204ENST00000506163 MCFD2Q8NI22 146 aa13.86□□□□□ -0.19
SMN1-204ENST00000506163 FCAMRQ8WWV6 532 aa13.86□□□□□ -0.19
SMN1-204ENST00000506163 CCDC160A6NGH7 325 aa13.85□□□□□ -0.19
SMN1-204ENST00000506163 MSGN1A6NI15 193 aa13.85□□□□□ -0.19
SMN1-204ENST00000506163 E7EUB6 86 aa13.85□□□□□ -0.19
SMN1-204ENST00000506163 GABARAPH6UMI1 98 aa13.85□□□□□ -0.19
SMN1-204ENST00000506163 APELAP0DMC3 54 aa13.85□□□□□ -0.19
SMN1-204ENST00000506163 MYCNOSP40205 109 aa13.85□□□□□ -0.19
SMN1-204ENST00000506163 TSPAN5P62079 268 aa13.85□□□□□ -0.19
SMN1-204ENST00000506163 TNXAQ16473 311 aa13.85□□□□□ -0.19
SMN1-204ENST00000506163 BEAN1Q3B7T3 259 aa13.85□□□□□ -0.19
SMN1-204ENST00000506163 TMEM65Q6PI78 240 aa13.85□□□□□ -0.19
SMN1-204ENST00000506163 TCTEX1D1Q8N7M0 179 aa13.85□□□□□ -0.19
SMN1-204ENST00000506163 OR5T1Q8NG75 326 aa13.85□□□□□ -0.19
SMN1-204ENST00000506163 C4orf3Q8WVX3 66 aa13.85□□□□□ -0.19
SMN1-204ENST00000506163 RHOVQ96L33 236 aa13.85□□□□□ -0.19
SMN1-204ENST00000506163 UBE2E2Q96LR5 201 aa13.85□□□□□ -0.19
SMN1-204ENST00000506163 MS4A10Q96PG2 267 aa13.85□□□□□ -0.19
SMN1-204ENST00000506163 OR5B12Q96R08 314 aa13.85□□□□□ -0.19
SMN1-204ENST00000506163 RSL24D1Q9UHA3 163 aaKnown RBP13.85□□□□□ -0.19
SMN1-204ENST00000506163 A0A1B0GW64 132 aa13.84□□□□□ -0.19
SMN1-204ENST00000506163 I3L521 148 aa13.84□□□□□ -0.19
SMN1-204ENST00000506163 CCL24O00175 119 aa13.84□□□□□ -0.19
SMN1-204ENST00000506163 RBFOX2O43251 390 aaKnown RBP eCLIP13.84□□□□□ -0.19
SMN1-204ENST00000506163 OR2A4O95047 310 aa13.84□□□□□ -0.19
SMN1-204ENST00000506163 CD74P04233 296 aa13.84□□□□□ -0.19
SMN1-204ENST00000506163 RLN1P04808 185 aa13.84□□□□□ -0.19
SMN1-204ENST00000506163 CD33P20138 364 aa13.84□□□□□ -0.19
SMN1-204ENST00000506163 SLC6A1P30531 599 aa13.84□□□□□ -0.19
SMN1-204ENST00000506163 KIR2DS2P43631 304 aa13.84□□□□□ -0.19
SMN1-204ENST00000506163 SSX9Q7RTT3 188 aa13.84□□□□□ -0.19
SMN1-204ENST00000506163 LHFPL1Q86WI0 220 aa13.84□□□□□ -0.19
SMN1-204ENST00000506163 C15orf40Q8WUR7 153 aa13.84□□□□□ -0.19
SMN1-204ENST00000506163 SMIM4Q8WVI0 70 aa13.84□□□□□ -0.19
SMN1-204ENST00000506163 OR2A7Q96R45 310 aa13.84□□□□□ -0.19
SMN1-204ENST00000506163 RSRP1Q9BUV0 290 aa13.84□□□□□ -0.19
SMN1-204ENST00000506163 ALX4Q9H161 411 aaPredicted RBP13.84□□□□□ -0.19
SMN1-204ENST00000506163 GPR31O00270 319 aa13.83□□□□□ -0.2
SMN1-204ENST00000506163 KBTBD11O94819 623 aa13.83□□□□□ -0.2
SMN1-204ENST00000506163 IL6RP08887 468 aaPredicted RBP13.83□□□□□ -0.2
SMN1-204ENST00000506163 ZNF735P0CB33 412 aa13.83□□□□□ -0.2
SMN1-204ENST00000506163 MYOD1P15172 320 aa13.83□□□□□ -0.2
SMN1-204ENST00000506163 IL18Q14116 193 aa13.83□□□□□ -0.2
SMN1-204ENST00000506163 ZNF585BQ52M93 769 aa13.83□□□□□ -0.2
SMN1-204ENST00000506163 PHLDA2Q53GA4 152 aa13.83□□□□□ -0.2
SMN1-204ENST00000506163 KPRPQ5T749 579 aaPredicted RBP13.83□□□□□ -0.2
SMN1-204ENST00000506163 PYHIN1Q6K0P9 492 aa13.83□□□□□ -0.2
SMN1-204ENST00000506163 TMEM229BQ8NBD8 167 aa13.83□□□□□ -0.2
SMN1-204ENST00000506163 OR5M8Q8NGP6 311 aa13.83□□□□□ -0.2
SMN1-204ENST00000506163 TMEM167AQ8TBQ9 72 aa13.83□□□□□ -0.2
SMN1-204ENST00000506163 SRSF12Q8WXF0 261 aaKnown RBP13.83□□□□□ -0.2
SMN1-204ENST00000506163 VSIG4Q9Y279 399 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms