RNA–Protein interactions for RNA: ENST00000506060.5

POLR2J3-211, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3

Gene POLR2J3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-211ENST00000506060 FKBP11Q9NYL4 201 aa9.78□□□□□ -0.84
POLR2J3-211ENST00000506060 ITGB1BP2Q9UKP3 347 aa9.78□□□□□ -0.84
POLR2J3-211ENST00000506060 PAIP2BQ9ULR5 123 aaKnown RBP9.78□□□□□ -0.84
POLR2J3-211ENST00000506060 MINOS1-NBL1R4GNA1 71 aa9.78□□□□□ -0.84
POLR2J3-211ENST00000506060 WNK2Q9Y3S1 2297 aa9.78□□□□□ -0.84
POLR2J3-211ENST00000506060 IGHV4-30-2A0A087WSY4 118 aa9.77□□□□□ -0.85
POLR2J3-211ENST00000506060 IGHV4-61A0A0C4DH41 118 aa9.77□□□□□ -0.85
POLR2J3-211ENST00000506060 RNF222A6NCQ9 220 aa9.77□□□□□ -0.85
POLR2J3-211ENST00000506060 RGS13O14921 159 aa9.77□□□□□ -0.85
POLR2J3-211ENST00000506060 CHST1O43916 411 aa9.77□□□□□ -0.85
POLR2J3-211ENST00000506060 GATA3P23771 443 aa9.77□□□□□ -0.85
POLR2J3-211ENST00000506060 CAV2P51636 162 aa9.77□□□□□ -0.85
POLR2J3-211ENST00000506060 LINC00205P59089 165 aa9.77□□□□□ -0.85
POLR2J3-211ENST00000506060 RPS16P62249 146 aaKnown RBP9.77□□□□□ -0.85
POLR2J3-211ENST00000506060 POLR2GP62487 172 aaKnown RBP eCLIP9.77□□□□□ -0.85
POLR2J3-211ENST00000506060 UBA52P62987 128 aaKnown RBP9.77□□□□□ -0.85
POLR2J3-211ENST00000506060 TNFRSF9Q07011 255 aa9.77□□□□□ -0.85
POLR2J3-211ENST00000506060 VMA21Q3ZAQ7 101 aa9.77□□□□□ -0.85
POLR2J3-211ENST00000506060 C1orf229Q6ZS94 237 aaPredicted RBP9.77□□□□□ -0.85
POLR2J3-211ENST00000506060 SSX9Q7RTT3 188 aa9.77□□□□□ -0.85
POLR2J3-211ENST00000506060 MOB3BQ86TA1 216 aa9.77□□□□□ -0.85
POLR2J3-211ENST00000506060 OR2C3Q8N628 320 aa9.77□□□□□ -0.85
POLR2J3-211ENST00000506060 OR8H1Q8NGG4 311 aa9.77□□□□□ -0.85
POLR2J3-211ENST00000506060 OR4P4Q8NGL7 312 aa9.77□□□□□ -0.85
POLR2J3-211ENST00000506060 OR4A5Q8NH83 315 aa9.77□□□□□ -0.85
POLR2J3-211ENST00000506060 NRGNQ92686 78 aa9.77□□□□□ -0.85
POLR2J3-211ENST00000506060 HARBI1Q96MB7 349 aa9.77□□□□□ -0.85
POLR2J3-211ENST00000506060 TMEM140Q9NV12 185 aa9.77□□□□□ -0.85
POLR2J3-211ENST00000506060 ZNRD1Q9P1U0 126 aa9.77□□□□□ -0.85
POLR2J3-211ENST00000506060 HSPB7Q9UBY9 170 aa9.77□□□□□ -0.85
POLR2J3-211ENST00000506060 NUP50Q9UKX7 468 aa9.77□□□□□ -0.85
POLR2J3-211ENST00000506060 PRNDQ9UKY0 176 aa9.77□□□□□ -0.85
POLR2J3-211ENST00000506060 TBL2Q9Y4P3 447 aaKnown RBP9.77□□□□□ -0.85
POLR2J3-211ENST00000506060 WSB1Q9Y6I7 421 aa9.77□□□□□ -0.85
POLR2J3-211ENST00000506060 IGHV1-3A0A0C4DH29 117 aa9.76□□□□□ -0.85
POLR2J3-211ENST00000506060 CEBPZOSA8MTT3 80 aa9.76□□□□□ -0.85
POLR2J3-211ENST00000506060 ODF3BA8MYP8 253 aa9.76□□□□□ -0.85
POLR2J3-211ENST00000506060 B4DSR2 109 aa9.76□□□□□ -0.85
POLR2J3-211ENST00000506060 IFNA17P01571 189 aa9.76□□□□□ -0.85
POLR2J3-211ENST00000506060 HKR1P10072 659 aa9.76□□□□□ -0.85
POLR2J3-211ENST00000506060 REG1BP48304 166 aa9.76□□□□□ -0.85
POLR2J3-211ENST00000506060 UBE2E1P51965 193 aa9.76□□□□□ -0.85
POLR2J3-211ENST00000506060 SPCS3P61009 180 aa9.76□□□□□ -0.85
POLR2J3-211ENST00000506060 UBE2KP61086 200 aa9.76□□□□□ -0.85
POLR2J3-211ENST00000506060 RPP30P78346 268 aaKnown RBP9.76□□□□□ -0.85
POLR2J3-211ENST00000506060 BAXQ07812 192 aa9.76□□□□□ -0.85
POLR2J3-211ENST00000506060 MIDNQ504T8 468 aa9.76□□□□□ -0.85
POLR2J3-211ENST00000506060 TPTE2P1Q5T6R2 138 aa9.76□□□□□ -0.85
POLR2J3-211ENST00000506060 PRSS57Q6UWY2 283 aa9.76□□□□□ -0.85
POLR2J3-211ENST00000506060 Q6ZRM9 215 aa9.76□□□□□ -0.85
POLR2J3-211ENST00000506060 STX12Q86Y82 276 aa9.76□□□□□ -0.85
POLR2J3-211ENST00000506060 OR52E5Q8NH55 327 aa9.76□□□□□ -0.85
POLR2J3-211ENST00000506060 SMIM8Q96KF7 97 aa9.76□□□□□ -0.85
POLR2J3-211ENST00000506060 TSNAXQ99598 290 aaKnown RBP9.76□□□□□ -0.85
POLR2J3-211ENST00000506060 RNF5Q99942 180 aa9.76□□□□□ -0.85
POLR2J3-211ENST00000506060 MS4A7Q9GZW8 240 aaPredicted RBP9.76□□□□□ -0.85
POLR2J3-211ENST00000506060 MAGT1Q9H0U3 335 aa9.76□□□□□ -0.85
POLR2J3-211ENST00000506060 ENY2Q9NPA8 101 aa9.76□□□□□ -0.85
POLR2J3-211ENST00000506060 LYRM2Q9NU23 88 aaPredicted RBP9.76□□□□□ -0.85
POLR2J3-211ENST00000506060 BET1LQ9NYM9 111 aa9.76□□□□□ -0.85
POLR2J3-211ENST00000506060 ANKRD17O75179 2603 aaKnown RBP9.76□□□□□ -0.85
POLR2J3-211ENST00000506060 ARHGAP32A7KAX9 2087 aa9.76□□□□□ -0.85
POLR2J3-211ENST00000506060 DCHS2Q6V1P9 2916 aa9.75□□□□□ -0.85
POLR2J3-211ENST00000506060 BORCS7-ASMTA0A0B4J1R7 106 aa9.75□□□□□ -0.85
POLR2J3-211ENST00000506060 TRAV20A0A0B4J274 112 aa9.75□□□□□ -0.85
POLR2J3-211ENST00000506060 FAM157AC9JC47 383 aa9.75□□□□□ -0.85
POLR2J3-211ENST00000506060 LY6LH3BQJ8 138 aa9.75□□□□□ -0.85
POLR2J3-211ENST00000506060 MSMBP08118 114 aa9.75□□□□□ -0.85
POLR2J3-211ENST00000506060 FGF2P09038 288 aa9.75□□□□□ -0.85
POLR2J3-211ENST00000506060 HOXB4P17483 251 aaPredicted RBP9.75□□□□□ -0.85
POLR2J3-211ENST00000506060 CD1BP29016 333 aa9.75□□□□□ -0.85
POLR2J3-211ENST00000506060 IZUMO4Q1ZYL8 232 aa9.75□□□□□ -0.85
POLR2J3-211ENST00000506060 AARDQ4LEZ3 155 aa9.75□□□□□ -0.85
POLR2J3-211ENST00000506060 OR4A47Q6IF82 309 aa9.75□□□□□ -0.85
POLR2J3-211ENST00000506060 EIF5AL1Q6IS14 154 aaKnown RBP9.75□□□□□ -0.85
POLR2J3-211ENST00000506060 ZNF429Q86V71 674 aa9.75□□□□□ -0.85
POLR2J3-211ENST00000506060 ZNF471Q9BX82 626 aaPredicted RBP9.75□□□□□ -0.85
POLR2J3-211ENST00000506060 HIPK2Q9H2X6 1198 aa9.75□□□□□ -0.85
POLR2J3-211ENST00000506060 PSENENQ9NZ42 101 aa9.75□□□□□ -0.85
POLR2J3-211ENST00000506060 PTPN13Q12923 2485 aa9.75□□□□□ -0.85
POLR2J3-211ENST00000506060 C15orf61A6NNL5 157 aa9.74□□□□□ -0.85
POLR2J3-211ENST00000506060 JTBO76095 146 aa9.74□□□□□ -0.85
POLR2J3-211ENST00000506060 TPT1P13693 172 aaKnown RBP9.74□□□□□ -0.85
POLR2J3-211ENST00000506060 HBG1P69891 147 aa9.74□□□□□ -0.85
POLR2J3-211ENST00000506060 HBG2P69892 147 aa9.74□□□□□ -0.85
POLR2J3-211ENST00000506060 RELBQ01201 579 aa9.74□□□□□ -0.85
POLR2J3-211ENST00000506060 PAX8Q06710 450 aa9.74□□□□□ -0.85
POLR2J3-211ENST00000506060 TEX261Q6UWH6 196 aa9.74□□□□□ -0.85
POLR2J3-211ENST00000506060 MRPL41Q8IXM3 137 aaKnown RBP9.74□□□□□ -0.85
POLR2J3-211ENST00000506060 DTD1Q8TEA8 209 aa9.74□□□□□ -0.85
POLR2J3-211ENST00000506060 MALSU1Q96EH3 234 aa9.74□□□□□ -0.85
POLR2J3-211ENST00000506060 PHYHIPLQ96FC7 376 aa9.74□□□□□ -0.85
POLR2J3-211ENST00000506060 RBKSQ9H477 322 aa9.74□□□□□ -0.85
POLR2J3-211ENST00000506060 MMP26Q9NRE1 261 aa9.74□□□□□ -0.85
POLR2J3-211ENST00000506060 UBQLN2Q9UHD9 624 aa9.74□□□□□ -0.85
POLR2J3-211ENST00000506060 FOXA2Q9Y261 457 aaPredicted RBP9.74□□□□□ -0.85
POLR2J3-211ENST00000506060 ZNF257Q9Y2Q1 563 aa9.74□□□□□ -0.85
POLR2J3-211ENST00000506060 U3KQ87 197 aa9.74□□□□□ -0.85
POLR2J3-211ENST00000506060 MED13LQ71F56 2210 aa9.74□□□□□ -0.85
POLR2J3-211ENST00000506060 RNASEK-C17orf49H0YIS7 233 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms