RNA–Protein interactions for RNA: ENST00000505054.2

SYNE4-207, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 713 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-207ENST00000505054 ZNF329Q86UD4 541 aa13.24□□□□□ -0.29
SYNE4-207ENST00000505054 Q8N402 240 aa13.24□□□□□ -0.29
SYNE4-207ENST00000505054 OR4C16Q8NGL9 310 aa13.24□□□□□ -0.29
SYNE4-207ENST00000505054 OR51H1Q8NH63 302 aa13.24□□□□□ -0.29
SYNE4-207ENST00000505054 OR4S2Q8NH73 311 aa13.24□□□□□ -0.29
SYNE4-207ENST00000505054 MRAPQ8TCY5 172 aa13.24□□□□□ -0.29
SYNE4-207ENST00000505054 CHPT1Q8WUD6 406 aa13.24□□□□□ -0.29
SYNE4-207ENST00000505054 MRGPRFQ96AM1 343 aa13.24□□□□□ -0.29
SYNE4-207ENST00000505054 CLCC1Q96S66 551 aa13.24□□□□□ -0.29
SYNE4-207ENST00000505054 SRRQ9GZT4 340 aa13.24□□□□□ -0.29
SYNE4-207ENST00000505054 OR51J1Q9H342 316 aa13.24□□□□□ -0.29
SYNE4-207ENST00000505054 ZNF580Q9UK33 172 aa13.24□□□□□ -0.29
SYNE4-207ENST00000505054 PSMB11A5LHX3 300 aa13.23□□□□□ -0.29
SYNE4-207ENST00000505054 ATP6V0E1O15342 81 aa13.23□□□□□ -0.29
SYNE4-207ENST00000505054 RBFOX2O43251 390 aaKnown RBP eCLIP13.23□□□□□ -0.29
SYNE4-207ENST00000505054 CA2P00918 260 aa13.23□□□□□ -0.29
SYNE4-207ENST00000505054 KIR2DS2P43631 304 aa13.23□□□□□ -0.29
SYNE4-207ENST00000505054 PPP5CP53041 499 aa13.23□□□□□ -0.29
SYNE4-207ENST00000505054 SSBP2P81877 361 aaPredicted RBP13.23□□□□□ -0.29
SYNE4-207ENST00000505054 CATR1Q13166 79 aa13.23□□□□□ -0.29
SYNE4-207ENST00000505054 MRGPRG-AS1Q2M3A8 158 aa13.23□□□□□ -0.29
SYNE4-207ENST00000505054 PHLDA2Q53GA4 152 aa13.23□□□□□ -0.29
SYNE4-207ENST00000505054 SLC38A6Q8IZM9 456 aa13.23□□□□□ -0.29
SYNE4-207ENST00000505054 SPAG16Q8N0X2 631 aa13.23□□□□□ -0.29
SYNE4-207ENST00000505054 PARP11Q9NR21 331 aa13.23□□□□□ -0.29
SYNE4-207ENST00000505054 FBXO7Q9Y3I1 522 aa13.23□□□□□ -0.29
SYNE4-207ENST00000505054 SAA1P0DJI8 122 aaPredicted RBP13.22□□□□□ -0.29
SYNE4-207ENST00000505054 CFHR3Q02985 330 aa13.22□□□□□ -0.29
SYNE4-207ENST00000505054 PJVKQ0ZLH3 352 aa13.22□□□□□ -0.29
SYNE4-207ENST00000505054 KLF9Q13886 244 aaPredicted RBP13.22□□□□□ -0.29
SYNE4-207ENST00000505054 VMA21Q3ZAQ7 101 aa13.22□□□□□ -0.29
SYNE4-207ENST00000505054 SCGB2B2Q4G0G5 96 aa13.22□□□□□ -0.29
SYNE4-207ENST00000505054 LPCAT3Q6P1A2 487 aa13.22□□□□□ -0.29
SYNE4-207ENST00000505054 IDO2Q6ZQW0 420 aa13.22□□□□□ -0.29
SYNE4-207ENST00000505054 PPP1R27Q86WC6 154 aa13.22□□□□□ -0.29
SYNE4-207ENST00000505054 CMTM1Q8IZ96 169 aa13.22□□□□□ -0.29
SYNE4-207ENST00000505054 VKORC1L1Q8N0U8 176 aa13.22□□□□□ -0.29
SYNE4-207ENST00000505054 TERB2Q8NHR7 220 aa13.22□□□□□ -0.29
SYNE4-207ENST00000505054 CITED2Q99967 270 aaPredicted RBP13.22□□□□□ -0.29
SYNE4-207ENST00000505054 DNAH3Q8TD57 4116 aa13.22□□□□□ -0.29
SYNE4-207ENST00000505054 NOTCH3Q9UM47 2321 aa13.21□□□□□ -0.29
SYNE4-207ENST00000505054 DISC1C4P0D8 188 aa13.21□□□□□ -0.29
SYNE4-207ENST00000505054 ARPC1BO15143 372 aaKnown RBP13.21□□□□□ -0.29
SYNE4-207ENST00000505054 EGR2P11161 476 aaPredicted RBP13.21□□□□□ -0.29
SYNE4-207ENST00000505054 PGAM2P15259 253 aa13.21□□□□□ -0.29
SYNE4-207ENST00000505054 PI3P19957 117 aa13.21□□□□□ -0.29
SYNE4-207ENST00000505054 CD83Q01151 205 aa13.21□□□□□ -0.29
SYNE4-207ENST00000505054 ZNF562Q6V9R5 426 aa13.21□□□□□ -0.29
SYNE4-207ENST00000505054 TEX45Q8NA69 505 aa13.21□□□□□ -0.29
SYNE4-207ENST00000505054 SDHCQ99643 169 aaPredicted RBP13.21□□□□□ -0.29
SYNE4-207ENST00000505054 SLC2A9Q9NRM0 540 aa13.21□□□□□ -0.29
SYNE4-207ENST00000505054 ADARB2-AS1A8MUL3 147 aa13.2□□□□□ -0.3
SYNE4-207ENST00000505054 G3V318 75 aa13.2□□□□□ -0.3
SYNE4-207ENST00000505054 S1PR2O95136 353 aa13.2□□□□□ -0.3
SYNE4-207ENST00000505054 CRIP2P52943 208 aaPredicted RBP13.2□□□□□ -0.3
SYNE4-207ENST00000505054 PRSS8Q16651 343 aa13.2□□□□□ -0.3
SYNE4-207ENST00000505054 C19orf54Q5BKX5 351 aa13.2□□□□□ -0.3
SYNE4-207ENST00000505054 TBC1D26Q86UD7 250 aa13.2□□□□□ -0.3
SYNE4-207ENST00000505054 OR4X2Q8NGF9 303 aa13.2□□□□□ -0.3
SYNE4-207ENST00000505054 OR51S1Q8NGJ8 323 aa13.2□□□□□ -0.3
SYNE4-207ENST00000505054 OR13C8Q8NGS7 320 aa13.2□□□□□ -0.3
SYNE4-207ENST00000505054 MARCH1Q8TCQ1 289 aa13.2□□□□□ -0.3
SYNE4-207ENST00000505054 FAM103A1Q9BTL3 118 aaKnown RBP13.2□□□□□ -0.3
SYNE4-207ENST00000505054 BATF3Q9NR55 127 aa13.2□□□□□ -0.3
SYNE4-207ENST00000505054 WSB1Q9Y6I7 421 aa13.2□□□□□ -0.3
SYNE4-207ENST00000505054 TRAV41A0A0B4J266 112 aa13.19□□□□□ -0.3
SYNE4-207ENST00000505054 VDAC1P21796 283 aa13.19□□□□□ -0.3
SYNE4-207ENST00000505054 F2RP25116 425 aa13.19□□□□□ -0.3
SYNE4-207ENST00000505054 PPIFP30405 207 aaKnown RBP13.19□□□□□ -0.3
SYNE4-207ENST00000505054 RND3P61587 244 aa13.19□□□□□ -0.3
SYNE4-207ENST00000505054 SLC35B1P78383 322 aa13.19□□□□□ -0.3
SYNE4-207ENST00000505054 BAK1Q16611 211 aa13.19□□□□□ -0.3
SYNE4-207ENST00000505054 ZNF585BQ52M93 769 aa13.19□□□□□ -0.3
SYNE4-207ENST00000505054 OXLD1Q5BKU9 147 aa13.19□□□□□ -0.3
SYNE4-207ENST00000505054 PUSL1Q8N0Z8 303 aaKnown RBP13.19□□□□□ -0.3
SYNE4-207ENST00000505054 GDPD1Q8N9F7 314 aa13.19□□□□□ -0.3
SYNE4-207ENST00000505054 POC5Q8NA72 575 aa13.19□□□□□ -0.3
SYNE4-207ENST00000505054 CD300LFQ8TDQ1 290 aa13.19□□□□□ -0.3
SYNE4-207ENST00000505054 ARPC1AQ92747 370 aa13.19□□□□□ -0.3
SYNE4-207ENST00000505054 ZNF486Q96H40 463 aaPredicted RBP13.19□□□□□ -0.3
SYNE4-207ENST00000505054 RHOVQ96L33 236 aa13.19□□□□□ -0.3
SYNE4-207ENST00000505054 ZNF430Q9H8G1 570 aaPredicted RBP13.19□□□□□ -0.3
SYNE4-207ENST00000505054 SLC2A8Q9NY64 477 aa13.19□□□□□ -0.3
SYNE4-207ENST00000505054 HPRT1P00492 218 aa13.18□□□□□ -0.3
SYNE4-207ENST00000505054 HRASP01112 189 aa13.18□□□□□ -0.3
SYNE4-207ENST00000505054 S100GP29377 79 aa13.18□□□□□ -0.3
SYNE4-207ENST00000505054 GNB1P62873 340 aa13.18□□□□□ -0.3
SYNE4-207ENST00000505054 FXYD3Q14802 87 aa13.18□□□□□ -0.3
SYNE4-207ENST00000505054 ECSCRQ19T08 205 aa13.18□□□□□ -0.3
SYNE4-207ENST00000505054 SSX9Q7RTT3 188 aa13.18□□□□□ -0.3
SYNE4-207ENST00000505054 NDUFA11Q86Y39 141 aa13.18□□□□□ -0.3
SYNE4-207ENST00000505054 TOMM5Q8N4H5 51 aa13.18□□□□□ -0.3
SYNE4-207ENST00000505054 COMMD1Q8N668 190 aa13.18□□□□□ -0.3
SYNE4-207ENST00000505054 GRPEL2Q8TAA5 225 aa13.18□□□□□ -0.3
SYNE4-207ENST00000505054 ABHD5Q8WTS1 349 aa13.18□□□□□ -0.3
SYNE4-207ENST00000505054 PRRT1Q99946 306 aa13.18□□□□□ -0.3
SYNE4-207ENST00000505054 GON7Q9BXV9 100 aa13.18□□□□□ -0.3
SYNE4-207ENST00000505054 PLEKHA2Q9HB19 425 aa13.18□□□□□ -0.3
SYNE4-207ENST00000505054 HRASLSQ9HDD0 168 aa13.18□□□□□ -0.3
SYNE4-207ENST00000505054 AKIP1Q9NQ31 210 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms