RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 F2RP25116 425 aa9.42□□□□□ -0.9
PDLIM5-208ENST00000504489 VDAC2P45880 294 aaPredicted RBP9.42□□□□□ -0.9
PDLIM5-208ENST00000504489 OR2B11Q5JQS5 317 aa9.42□□□□□ -0.9
PDLIM5-208ENST00000504489 C9orf152Q5JTZ5 239 aa9.42□□□□□ -0.9
PDLIM5-208ENST00000504489 LIN54Q6MZP7 749 aa9.42□□□□□ -0.9
PDLIM5-208ENST00000504489 C12orf54Q6X4T0 127 aa9.42□□□□□ -0.9
PDLIM5-208ENST00000504489 IDO2Q6ZQW0 420 aa9.42□□□□□ -0.9
PDLIM5-208ENST00000504489 SLC35E3Q7Z769 313 aa9.42□□□□□ -0.9
PDLIM5-208ENST00000504489 SPAG16Q8N0X2 631 aa9.42□□□□□ -0.9
PDLIM5-208ENST00000504489 POC5Q8NA72 575 aa9.42□□□□□ -0.9
PDLIM5-208ENST00000504489 OR51H1Q8NH63 302 aa9.42□□□□□ -0.9
PDLIM5-208ENST00000504489 SPATA3Q8NHX4 192 aa9.42□□□□□ -0.9
PDLIM5-208ENST00000504489 SCGB3A2Q96PL1 93 aa9.42□□□□□ -0.9
PDLIM5-208ENST00000504489 AIFM2Q9BRQ8 373 aa9.42□□□□□ -0.9
PDLIM5-208ENST00000504489 WDR12Q9GZL7 423 aaKnown RBP9.42□□□□□ -0.9
PDLIM5-208ENST00000504489 SLC2A9Q9NRM0 540 aa9.42□□□□□ -0.9
PDLIM5-208ENST00000504489 FAM212BQ9NTI7 297 aaPredicted RBP9.42□□□□□ -0.9
PDLIM5-208ENST00000504489 METTL1Q9UBP6 276 aaKnown RBP9.42□□□□□ -0.9
PDLIM5-208ENST00000504489 GPR132Q9UNW8 380 aa9.42□□□□□ -0.9
PDLIM5-208ENST00000504489 NAP1L6A6NFF2 107 aa9.41□□□□□ -0.9
PDLIM5-208ENST00000504489 MPPED1O15442 326 aa9.41□□□□□ -0.9
PDLIM5-208ENST00000504489 KCNAB3O43448 404 aa9.41□□□□□ -0.9
PDLIM5-208ENST00000504489 SLC25A17O43808 307 aa9.41□□□□□ -0.9
PDLIM5-208ENST00000504489 RAMP3O60896 148 aa9.41□□□□□ -0.9
PDLIM5-208ENST00000504489 HPRT1P00492 218 aa9.41□□□□□ -0.9
PDLIM5-208ENST00000504489 HRASP01112 189 aa9.41□□□□□ -0.9
PDLIM5-208ENST00000504489 PI3P19957 117 aa9.41□□□□□ -0.9
PDLIM5-208ENST00000504489 PIGPP57054 158 aa9.41□□□□□ -0.9
PDLIM5-208ENST00000504489 UBE2KP61086 200 aa9.41□□□□□ -0.9
PDLIM5-208ENST00000504489 ZNF846Q147U1 533 aa9.41□□□□□ -0.9
PDLIM5-208ENST00000504489 PLGLAQ15195 96 aa9.41□□□□□ -0.9
PDLIM5-208ENST00000504489 VMA21Q3ZAQ7 101 aa9.41□□□□□ -0.9
PDLIM5-208ENST00000504489 TBC1D26Q86UD7 250 aa9.41□□□□□ -0.9
PDLIM5-208ENST00000504489 CCDC71LQ8N9Z2 235 aa9.41□□□□□ -0.9
PDLIM5-208ENST00000504489 TEX45Q8NA69 505 aa9.41□□□□□ -0.9
PDLIM5-208ENST00000504489 C7orf50Q9BRJ6 194 aaKnown RBP9.41□□□□□ -0.9
PDLIM5-208ENST00000504489 WNT10AQ9GZT5 417 aa9.41□□□□□ -0.9
PDLIM5-208ENST00000504489 PLEKHA2Q9HB19 425 aa9.41□□□□□ -0.9
PDLIM5-208ENST00000504489 ZNF580Q9UK33 172 aa9.41□□□□□ -0.9
PDLIM5-208ENST00000504489 C14orf166Q9Y224 244 aaKnown RBP9.41□□□□□ -0.9
PDLIM5-208ENST00000504489 IGHV7-81A0A0B4J1V7 117 aa9.4□□□□□ -0.9
PDLIM5-208ENST00000504489 LINC01548A6NM66 108 aa9.4□□□□□ -0.9
PDLIM5-208ENST00000504489 FCN1O00602 326 aa9.4□□□□□ -0.9
PDLIM5-208ENST00000504489 VSIG10L2P0DP72 767 aa9.4□□□□□ -0.9
PDLIM5-208ENST00000504489 TNP2Q05952 138 aa9.4□□□□□ -0.9
PDLIM5-208ENST00000504489 POU2AF1Q16633 256 aa9.4□□□□□ -0.9
PDLIM5-208ENST00000504489 TMEM95Q3KNT9 176 aa9.4□□□□□ -0.9
PDLIM5-208ENST00000504489 ZNF585BQ52M93 769 aa9.4□□□□□ -0.9
PDLIM5-208ENST00000504489 PPP1R27Q86WC6 154 aa9.4□□□□□ -0.9
PDLIM5-208ENST00000504489 FOXRED2Q8IWF2 684 aa9.4□□□□□ -0.9
PDLIM5-208ENST00000504489 WIPF2Q8TF74 440 aaPredicted RBP9.4□□□□□ -0.9
PDLIM5-208ENST00000504489 WFDC12Q8WWY7 111 aa9.4□□□□□ -0.9
PDLIM5-208ENST00000504489 HSPB9Q9BQS6 159 aa9.4□□□□□ -0.9
PDLIM5-208ENST00000504489 SLC25A21Q9BQT8 299 aaPredicted RBP9.4□□□□□ -0.9
PDLIM5-208ENST00000504489 RTBDNQ9BSG5 229 aaPredicted RBP9.4□□□□□ -0.9
PDLIM5-208ENST00000504489 ZNF747Q9BV97 191 aa9.4□□□□□ -0.9
PDLIM5-208ENST00000504489 C5orf66Q9H5L9 145 aa9.4□□□□□ -0.9
PDLIM5-208ENST00000504489 COMMD9Q9P000 198 aa9.4□□□□□ -0.9
PDLIM5-208ENST00000504489 COPZ2Q9P299 210 aa9.4□□□□□ -0.9
PDLIM5-208ENST00000504489 CENPXA8MT69 81 aa9.39□□□□□ -0.91
PDLIM5-208ENST00000504489 AP4M1O00189 453 aa9.39□□□□□ -0.91
PDLIM5-208ENST00000504489 B3GALNT1O75752 331 aa9.39□□□□□ -0.91
PDLIM5-208ENST00000504489 IGF1P05019 195 aa9.39□□□□□ -0.91
PDLIM5-208ENST00000504489 SAA1P0DJI8 122 aaPredicted RBP9.39□□□□□ -0.91
PDLIM5-208ENST00000504489 NQO2P16083 231 aa9.39□□□□□ -0.91
PDLIM5-208ENST00000504489 LPAR6P43657 344 aa9.39□□□□□ -0.91
PDLIM5-208ENST00000504489 TAS2R31P59538 309 aa9.39□□□□□ -0.91
PDLIM5-208ENST00000504489 MRGPRG-AS1Q2M3A8 158 aa9.39□□□□□ -0.91
PDLIM5-208ENST00000504489 ZNF562Q6V9R5 426 aa9.39□□□□□ -0.91
PDLIM5-208ENST00000504489 PUSL1Q8N0Z8 303 aaKnown RBP9.39□□□□□ -0.91
PDLIM5-208ENST00000504489 CADM3Q8N126 398 aa9.39□□□□□ -0.91
PDLIM5-208ENST00000504489 KLHDC1Q8N7A1 406 aa9.39□□□□□ -0.91
PDLIM5-208ENST00000504489 C3orf56Q8N813 242 aa9.39□□□□□ -0.91
PDLIM5-208ENST00000504489 VSTM2AQ8TAG5 236 aa9.39□□□□□ -0.91
PDLIM5-208ENST00000504489 RHOVQ96L33 236 aa9.39□□□□□ -0.91
PDLIM5-208ENST00000504489 OR51J1Q9H342 316 aa9.39□□□□□ -0.91
PDLIM5-208ENST00000504489 TPSG1Q9NRR2 321 aa9.39□□□□□ -0.91
PDLIM5-208ENST00000504489 VSIG4Q9Y279 399 aa9.39□□□□□ -0.91
PDLIM5-208ENST00000504489 WNK1Q9H4A3 2382 aa9.38□□□□□ -0.91
PDLIM5-208ENST00000504489 LINC00854A0A1B0GVQ3 168 aa9.38□□□□□ -0.91
PDLIM5-208ENST00000504489 H0Y980 276 aa9.38□□□□□ -0.91
PDLIM5-208ENST00000504489 PLA2G10O15496 165 aa9.38□□□□□ -0.91
PDLIM5-208ENST00000504489 OR2A4O95047 310 aa9.38□□□□□ -0.91
PDLIM5-208ENST00000504489 S1PR2O95136 353 aa9.38□□□□□ -0.91
PDLIM5-208ENST00000504489 CA2P00918 260 aa9.38□□□□□ -0.91
PDLIM5-208ENST00000504489 RPA2P15927 270 aa9.38□□□□□ -0.91
PDLIM5-208ENST00000504489 KRTAP10-3P60369 221 aa9.38□□□□□ -0.91
PDLIM5-208ENST00000504489 CX3CL1P78423 397 aa9.38□□□□□ -0.91
PDLIM5-208ENST00000504489 CENPVQ7Z7K6 275 aaPredicted RBP9.38□□□□□ -0.91
PDLIM5-208ENST00000504489 VKORC1L1Q8N0U8 176 aa9.38□□□□□ -0.91
PDLIM5-208ENST00000504489 STPG2Q8N412 459 aa9.38□□□□□ -0.91
PDLIM5-208ENST00000504489 CHPT1Q8WUD6 406 aa9.38□□□□□ -0.91
PDLIM5-208ENST00000504489 R3HDM4Q96D70 268 aa9.38□□□□□ -0.91
PDLIM5-208ENST00000504489 OR2A7Q96R45 310 aa9.38□□□□□ -0.91
PDLIM5-208ENST00000504489 CLCC1Q96S66 551 aa9.38□□□□□ -0.91
PDLIM5-208ENST00000504489 BET1LQ9NYM9 111 aa9.38□□□□□ -0.91
PDLIM5-208ENST00000504489 C3orf85A0A1B0GTC6 90 aa9.37□□□□□ -0.91
PDLIM5-208ENST00000504489 CRYM-AS1A6NIL9 109 aa9.37□□□□□ -0.91
PDLIM5-208ENST00000504489 CREBL2O60519 120 aaPredicted RBP9.37□□□□□ -0.91
PDLIM5-208ENST00000504489 IL6RP08887 468 aaPredicted RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms