RNA–Protein interactions for RNA: ENST00000503982.1

LSM6-203, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 820 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-203ENST00000503982 ADAM30Q9UKF2 790 aa17.03■□□□□ 0.32
LSM6-203ENST00000503982 ELF5Q9UKW6 265 aaPredicted RBP17.03■□□□□ 0.32
LSM6-203ENST00000503982 SSX5O60225 188 aa17.02■□□□□ 0.32
LSM6-203ENST00000503982 TAS2R20P59543 309 aa17.02■□□□□ 0.32
LSM6-203ENST00000503982 GNG2P59768 71 aa17.02■□□□□ 0.32
LSM6-203ENST00000503982 PJVKQ0ZLH3 352 aa17.02■□□□□ 0.32
LSM6-203ENST00000503982 TMEM69Q5SWH9 247 aa17.02■□□□□ 0.32
LSM6-203ENST00000503982 ADTRPQ96IZ2 230 aa17.02■□□□□ 0.32
LSM6-203ENST00000503982 RHOVQ96L33 236 aa17.02■□□□□ 0.32
LSM6-203ENST00000503982 DCUN1D5Q9BTE7 237 aa17.02■□□□□ 0.32
LSM6-203ENST00000503982 ANAPC10Q9UM13 185 aa17.02■□□□□ 0.32
LSM6-203ENST00000503982 SMAD5-AS1Q9Y6J3 95 aa17.02■□□□□ 0.32
LSM6-203ENST00000503982 U3KQK5 164 aa17.02■□□□□ 0.32
LSM6-203ENST00000503982 ANKRD34BA5PLL1 514 aa17.01■□□□□ 0.31
LSM6-203ENST00000503982 HPGDSO60760 199 aa17.01■□□□□ 0.31
LSM6-203ENST00000503982 ELK1P19419 428 aa17.01■□□□□ 0.31
LSM6-203ENST00000503982 CBX5P45973 191 aa17.01■□□□□ 0.31
LSM6-203ENST00000503982 ELOVL1Q9BW60 279 aa17.01■□□□□ 0.31
LSM6-203ENST00000503982 COA4Q9NYJ1 87 aa17.01■□□□□ 0.31
LSM6-203ENST00000503982 A0A0G2JLM5 398 aa17■□□□□ 0.31
LSM6-203ENST00000503982 MPPED1O15442 326 aa17■□□□□ 0.31
LSM6-203ENST00000503982 CRYZL1O95825 349 aa17■□□□□ 0.31
LSM6-203ENST00000503982 IGLV2-23P01705 113 aa17■□□□□ 0.31
LSM6-203ENST00000503982 HLA-DQB1P01920 261 aa17■□□□□ 0.31
LSM6-203ENST00000503982 APELAP0DMC3 54 aa17■□□□□ 0.31
LSM6-203ENST00000503982 SPNP16150 400 aa17■□□□□ 0.31
LSM6-203ENST00000503982 TNXAQ16473 311 aa17■□□□□ 0.31
LSM6-203ENST00000503982 TMEM177Q53S58 311 aa17■□□□□ 0.31
LSM6-203ENST00000503982 ACSM6Q6P461 480 aa17■□□□□ 0.31
LSM6-203ENST00000503982 NUDCD2Q8WVJ2 157 aa17■□□□□ 0.31
LSM6-203ENST00000503982 DGCR14Q96DF8 476 aaKnown RBP17■□□□□ 0.31
LSM6-203ENST00000503982 C5orf30Q96GV9 206 aa17■□□□□ 0.31
LSM6-203ENST00000503982 MIXL1Q9H2W2 232 aa17■□□□□ 0.31
LSM6-203ENST00000503982 IGKV1D-8A0A087WSZ0 117 aa16.99■□□□□ 0.31
LSM6-203ENST00000503982 H3BUA1 57 aa16.99■□□□□ 0.31
LSM6-203ENST00000503982 H1FOOQ8IZA3 346 aaPredicted RBP16.99■□□□□ 0.31
LSM6-203ENST00000503982 C15orf40Q8WUR7 153 aa16.99■□□□□ 0.31
LSM6-203ENST00000503982 SCPEP1Q9HB40 452 aa16.99■□□□□ 0.31
LSM6-203ENST00000503982 RANGRFQ9HD47 186 aaPredicted RBP16.99■□□□□ 0.31
LSM6-203ENST00000503982 RABL2AQ9UBK7 228 aaPredicted RBP16.99■□□□□ 0.31
LSM6-203ENST00000503982 RABL2BQ9UNT1 228 aa16.99■□□□□ 0.31
LSM6-203ENST00000503982 CCDC160A6NGH7 325 aa16.98■□□□□ 0.31
LSM6-203ENST00000503982 TUSC2O75896 110 aa16.98■□□□□ 0.31
LSM6-203ENST00000503982 CTXN2P0C2S0 81 aa16.98■□□□□ 0.31
LSM6-203ENST00000503982 GP9P14770 177 aa16.98■□□□□ 0.31
LSM6-203ENST00000503982 ZP3P21754 424 aa16.98■□□□□ 0.31
LSM6-203ENST00000503982 DUTP33316 252 aaKnown RBP16.98■□□□□ 0.31
LSM6-203ENST00000503982 DEFA5Q01523 94 aa16.98■□□□□ 0.31
LSM6-203ENST00000503982 IDO2Q6ZQW0 420 aa16.98■□□□□ 0.31
LSM6-203ENST00000503982 HOGA1Q86XE5 327 aa16.98■□□□□ 0.31
LSM6-203ENST00000503982 TMEM68Q96MH6 324 aa16.98■□□□□ 0.31
LSM6-203ENST00000503982 SULT1C2O00338 296 aa16.97■□□□□ 0.31
LSM6-203ENST00000503982 FCGR3BO75015 233 aa16.97■□□□□ 0.31
LSM6-203ENST00000503982 ACTL6BO94805 426 aa16.97■□□□□ 0.31
LSM6-203ENST00000503982 CRYGBP07316 175 aa16.97■□□□□ 0.31
LSM6-203ENST00000503982 NAT1P18440 290 aa16.97■□□□□ 0.31
LSM6-203ENST00000503982 NFYAP23511 347 aaPredicted RBP16.97■□□□□ 0.31
LSM6-203ENST00000503982 OR2B11Q5JQS5 317 aa16.97■□□□□ 0.31
LSM6-203ENST00000503982 HAPLN4Q86UW8 402 aa16.97■□□□□ 0.31
LSM6-203ENST00000503982 ZNF645Q8N7E2 425 aa16.97■□□□□ 0.31
LSM6-203ENST00000503982 ANXA10Q9UJ72 324 aa16.97■□□□□ 0.31
LSM6-203ENST00000503982 DPPA5A6NC42 116 aa16.96■□□□□ 0.31
LSM6-203ENST00000503982 SRRM4A7MD48 611 aaKnown RBP16.96■□□□□ 0.31
LSM6-203ENST00000503982 LINC00473A8K010 186 aa16.96■□□□□ 0.31
LSM6-203ENST00000503982 CTDSP2O14595 271 aa16.96■□□□□ 0.31
LSM6-203ENST00000503982 CNIH2Q6PI25 160 aa16.96■□□□□ 0.31
LSM6-203ENST00000503982 OVCH2Q7RTZ1 564 aa16.96■□□□□ 0.31
LSM6-203ENST00000503982 LAX1Q8IWV1 398 aa16.96■□□□□ 0.31
LSM6-203ENST00000503982 TEX45Q8NA69 505 aa16.96■□□□□ 0.31
LSM6-203ENST00000503982 GPX8Q8TED1 209 aa16.96■□□□□ 0.31
LSM6-203ENST00000503982 PRELID3BQ9Y3B1 194 aa16.96■□□□□ 0.31
LSM6-203ENST00000503982 MSGN1A6NI15 193 aa16.95■□□□□ 0.3
LSM6-203ENST00000503982 AADACP22760 399 aa16.95■□□□□ 0.3
LSM6-203ENST00000503982 PRSS3P35030 304 aa16.95■□□□□ 0.3
LSM6-203ENST00000503982 UBE2KP61086 200 aa16.95■□□□□ 0.3
LSM6-203ENST00000503982 SSBP2P81877 361 aaPredicted RBP16.95■□□□□ 0.3
LSM6-203ENST00000503982 KCTD9Q7L273 389 aa16.95■□□□□ 0.3
LSM6-203ENST00000503982 OSR1Q8TAX0 266 aaPredicted RBP16.95■□□□□ 0.3
LSM6-203ENST00000503982 EXTL2Q9UBQ6 330 aa16.95■□□□□ 0.3
LSM6-203ENST00000503982 MRPS7Q9Y2R9 242 aaKnown RBP16.95■□□□□ 0.3
LSM6-203ENST00000503982 OR2W1Q9Y3N9 320 aa16.95■□□□□ 0.3
LSM6-203ENST00000503982 FAM25AB3EWG3 89 aa16.94■□□□□ 0.3
LSM6-203ENST00000503982 FAM25CB3EWG5 89 aa16.94■□□□□ 0.3
LSM6-203ENST00000503982 FAM25GB3EWG6 89 aa16.94■□□□□ 0.3
LSM6-203ENST00000503982 CREBL2O60519 120 aaPredicted RBP16.94■□□□□ 0.3
LSM6-203ENST00000503982 ARPC4P59998 168 aa16.94■□□□□ 0.3
LSM6-203ENST00000503982 PRSS8Q16651 343 aa16.94■□□□□ 0.3
LSM6-203ENST00000503982 BEST4Q8NFU0 473 aa16.94■□□□□ 0.3
LSM6-203ENST00000503982 MCFD2Q8NI22 146 aa16.94■□□□□ 0.3
LSM6-203ENST00000503982 SRSF12Q8WXF0 261 aaKnown RBP16.94■□□□□ 0.3
LSM6-203ENST00000503982 DDB2Q92466 427 aa16.94■□□□□ 0.3
LSM6-203ENST00000503982 TINAGL1Q9GZM7 467 aaPredicted RBP16.94■□□□□ 0.3
LSM6-203ENST00000503982 RGS5O15539 181 aa16.93■□□□□ 0.3
LSM6-203ENST00000503982 SLC22A5O76082 557 aa16.93■□□□□ 0.3
LSM6-203ENST00000503982 MRPS10P82664 201 aaKnown RBP16.93■□□□□ 0.3
LSM6-203ENST00000503982 TCTEX1D2Q8WW35 142 aa16.93■□□□□ 0.3
LSM6-203ENST00000503982 SNAPC3Q92966 411 aa16.93■□□□□ 0.3
LSM6-203ENST00000503982 PEF1Q9UBV8 284 aaKnown RBP16.93■□□□□ 0.3
LSM6-203ENST00000503982 RBMX2Q9Y388 322 aaKnown RBP16.93■□□□□ 0.3
LSM6-203ENST00000503982 CTDSPLO15194 276 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms