RNA–Protein interactions for RNA: ENST00000503974.5

PDLIM5-207, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 2,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-207ENST00000503974 HINT3Q9NQE9 182 aaKnown RBP8.1□□□□□ -1.11
PDLIM5-207ENST00000503974 ZNF835Q9Y2P0 537 aa8.1□□□□□ -1.11
PDLIM5-207ENST00000503974 DNAJC13O75165 2243 aa8.09□□□□□ -1.11
PDLIM5-207ENST00000503974 LOC102723971A0A1B0GUV8 181 aa8.09□□□□□ -1.11
PDLIM5-207ENST00000503974 TMEM213A2RRL7 107 aa8.09□□□□□ -1.11
PDLIM5-207ENST00000503974 J3QR89 54 aa8.09□□□□□ -1.11
PDLIM5-207ENST00000503974 ZNF253O75346 499 aa8.09□□□□□ -1.11
PDLIM5-207ENST00000503974 NUDT3O95989 172 aa8.09□□□□□ -1.11
PDLIM5-207ENST00000503974 ZNF43P17038 809 aa8.09□□□□□ -1.11
PDLIM5-207ENST00000503974 SRP14P37108 136 aaKnown RBP8.09□□□□□ -1.11
PDLIM5-207ENST00000503974 MFAP4P55083 255 aa8.09□□□□□ -1.11
PDLIM5-207ENST00000503974 LCN6P62502 163 aa8.09□□□□□ -1.11
PDLIM5-207ENST00000503974 LCN2P80188 198 aa8.09□□□□□ -1.11
PDLIM5-207ENST00000503974 RPL24P83731 157 aaKnown RBP8.09□□□□□ -1.11
PDLIM5-207ENST00000503974 ZNF85Q03923 595 aa8.09□□□□□ -1.11
PDLIM5-207ENST00000503974 LCN15Q6UWW0 184 aa8.09□□□□□ -1.11
PDLIM5-207ENST00000503974 ZNF611Q8N823 705 aa8.09□□□□□ -1.11
PDLIM5-207ENST00000503974 FGGYQ96C11 551 aa8.09□□□□□ -1.11
PDLIM5-207ENST00000503974 SMIM19Q96E16 107 aa8.09□□□□□ -1.11
PDLIM5-207ENST00000503974 WDYHV1Q96HA8 205 aa8.09□□□□□ -1.11
PDLIM5-207ENST00000503974 SH3BGRL3Q9H299 93 aa8.09□□□□□ -1.11
PDLIM5-207ENST00000503974 FNDC4Q9H6D8 234 aaPredicted RBP8.09□□□□□ -1.11
PDLIM5-207ENST00000503974 SERTAD4Q9NUC0 356 aa8.09□□□□□ -1.11
PDLIM5-207ENST00000503974 JKAMPQ9P055 326 aa8.09□□□□□ -1.11
PDLIM5-207ENST00000503974 BOD1L1Q8NFC6 3051 aa8.09□□□□□ -1.11
PDLIM5-207ENST00000503974 FAM208BQ5VWN6 2430 aa8.09□□□□□ -1.11
PDLIM5-207ENST00000503974 KIAA1549Q9HCM3 1950 aa8.09□□□□□ -1.11
PDLIM5-207ENST00000503974 MED12Q93074 2177 aa8.09□□□□□ -1.11
PDLIM5-207ENST00000503974 H3BML4 177 aa8.09□□□□□ -1.11
PDLIM5-207ENST00000503974 SIRPB1O00241 398 aa8.09□□□□□ -1.11
PDLIM5-207ENST00000503974 GPR137BO60478 399 aa8.09□□□□□ -1.11
PDLIM5-207ENST00000503974 SERF1AO75920 110 aa8.09□□□□□ -1.11
PDLIM5-207ENST00000503974 RCBTB2O95199 551 aa8.09□□□□□ -1.11
PDLIM5-207ENST00000503974 CYB5AP00167 134 aa8.09□□□□□ -1.11
PDLIM5-207ENST00000503974 HLA-HP01893 362 aa8.09□□□□□ -1.11
PDLIM5-207ENST00000503974 PRB1P04280 392 aa8.09□□□□□ -1.11
PDLIM5-207ENST00000503974 CDK5R1Q15078 307 aa8.09□□□□□ -1.11
PDLIM5-207ENST00000503974 ADIRFQ15847 76 aa8.09□□□□□ -1.11
PDLIM5-207ENST00000503974 IGFBP7Q16270 282 aa8.09□□□□□ -1.11
PDLIM5-207ENST00000503974 PCK2Q16822 640 aa8.09□□□□□ -1.11
PDLIM5-207ENST00000503974 ADGRE4PQ86SQ3 457 aa8.09□□□□□ -1.11
PDLIM5-207ENST00000503974 LSRQ86X29 649 aaPredicted RBP8.09□□□□□ -1.11
PDLIM5-207ENST00000503974 NEUROG1Q92886 237 aa8.09□□□□□ -1.11
PDLIM5-207ENST00000503974 RBMXL1Q96E39 390 aaKnown RBP8.09□□□□□ -1.11
PDLIM5-207ENST00000503974 DUX5Q96PT3 197 aa8.09□□□□□ -1.11
PDLIM5-207ENST00000503974 TNFRSF13CQ96RJ3 184 aa8.09□□□□□ -1.11
PDLIM5-207ENST00000503974 C1QTNF4Q9BXJ3 329 aa8.09□□□□□ -1.11
PDLIM5-207ENST00000503974 B3GALT5Q9Y2C3 310 aa8.09□□□□□ -1.11
PDLIM5-207ENST00000503974 A0A0J9YW62 118 aa8.08□□□□□ -1.12
PDLIM5-207ENST00000503974 ZC3H12DA2A288 527 aaKnown RBP8.08□□□□□ -1.12
PDLIM5-207ENST00000503974 DPRXA6NFQ7 191 aa8.08□□□□□ -1.12
PDLIM5-207ENST00000503974 TNFSF12O43508 249 aa8.08□□□□□ -1.12
PDLIM5-207ENST00000503974 REG1AP05451 166 aa8.08□□□□□ -1.12
PDLIM5-207ENST00000503974 GPX1P07203 203 aa8.08□□□□□ -1.12
PDLIM5-207ENST00000503974 ADH4P08319 380 aa8.08□□□□□ -1.12
PDLIM5-207ENST00000503974 IGFBP2P18065 325 aa8.08□□□□□ -1.12
PDLIM5-207ENST00000503974 TAS2R31P59538 309 aa8.08□□□□□ -1.12
PDLIM5-207ENST00000503974 EMC4Q5J8M3 183 aa8.08□□□□□ -1.12
PDLIM5-207ENST00000503974 GFRALQ6UXV0 394 aa8.08□□□□□ -1.12
PDLIM5-207ENST00000503974 SIGLECL1Q8N7X8 197 aa8.08□□□□□ -1.12
PDLIM5-207ENST00000503974 FAM57AQ8TBR7 257 aa8.08□□□□□ -1.12
PDLIM5-207ENST00000503974 ANAPC13Q9BS18 74 aa8.08□□□□□ -1.12
PDLIM5-207ENST00000503974 MPDZO75970 2070 aa8.08□□□□□ -1.12
PDLIM5-207ENST00000503974 TRAV9-2A0A087WT02 112 aa8.07□□□□□ -1.12
PDLIM5-207ENST00000503974 A0A087WUU8 490 aa8.07□□□□□ -1.12
PDLIM5-207ENST00000503974 HS3ST1O14792 307 aa8.07□□□□□ -1.12
PDLIM5-207ENST00000503974 DNPH1O43598 174 aa8.07□□□□□ -1.12
PDLIM5-207ENST00000503974 KRASP01116 189 aa8.07□□□□□ -1.12
PDLIM5-207ENST00000503974 SERPINE2P07093 398 aa8.07□□□□□ -1.12
PDLIM5-207ENST00000503974 ZNF93P35789 620 aaPredicted RBP8.07□□□□□ -1.12
PDLIM5-207ENST00000503974 THBS3P49746 956 aa8.07□□□□□ -1.12
PDLIM5-207ENST00000503974 POU3F1Q03052 451 aaPredicted RBP8.07□□□□□ -1.12
PDLIM5-207ENST00000503974 MEF2CQ06413 473 aaPredicted RBP8.07□□□□□ -1.12
PDLIM5-207ENST00000503974 PMCHL1Q16048 86 aa8.07□□□□□ -1.12
PDLIM5-207ENST00000503974 ACKR1Q16570 336 aa8.07□□□□□ -1.12
PDLIM5-207ENST00000503974 C1orf140Q5VVS0 124 aa8.07□□□□□ -1.12
PDLIM5-207ENST00000503974 ZPLD1Q8TCW7 415 aa8.07□□□□□ -1.12
PDLIM5-207ENST00000503974 TMEM255BQ8WV15 326 aa8.07□□□□□ -1.12
PDLIM5-207ENST00000503974 PERPQ96FX8 193 aa8.07□□□□□ -1.12
PDLIM5-207ENST00000503974 SAMD10Q9BYL1 202 aa8.07□□□□□ -1.12
PDLIM5-207ENST00000503974 MS4A5Q9H3V2 200 aa8.07□□□□□ -1.12
PDLIM5-207ENST00000503974 ST20Q9HBF5 79 aa8.07□□□□□ -1.12
PDLIM5-207ENST00000503974 PNRC2Q9NPJ4 139 aaKnown RBP8.07□□□□□ -1.12
PDLIM5-207ENST00000503974 TRAV36DV7A0A075B6V5 113 aa8.07□□□□□ -1.12
PDLIM5-207ENST00000503974 SMIM9A6NGZ8 99 aa8.07□□□□□ -1.12
PDLIM5-207ENST00000503974 C9orf118A6NHY6 69 aa8.07□□□□□ -1.12
PDLIM5-207ENST00000503974 LINC00869P0C866 280 aa8.07□□□□□ -1.12
PDLIM5-207ENST00000503974 SFTPDP35247 375 aa8.07□□□□□ -1.12
PDLIM5-207ENST00000503974 TLE1Q04724 770 aa8.07□□□□□ -1.12
PDLIM5-207ENST00000503974 MYBPHQ13203 477 aa8.07□□□□□ -1.12
PDLIM5-207ENST00000503974 CLEC12AQ5QGZ9 265 aa8.07□□□□□ -1.12
PDLIM5-207ENST00000503974 MRPL54Q6P161 138 aaKnown RBP8.07□□□□□ -1.12
PDLIM5-207ENST00000503974 SGPP2Q8IWX5 399 aa8.07□□□□□ -1.12
PDLIM5-207ENST00000503974 OR2K2Q8NGT1 345 aa8.07□□□□□ -1.12
PDLIM5-207ENST00000503974 GRAMD2BQ96HH9 432 aa8.07□□□□□ -1.12
PDLIM5-207ENST00000503974 GPER1Q99527 375 aa8.07□□□□□ -1.12
PDLIM5-207ENST00000503974 ATP5SQ99766 215 aa8.07□□□□□ -1.12
PDLIM5-207ENST00000503974 BANF2Q9H503 90 aa8.07□□□□□ -1.12
PDLIM5-207ENST00000503974 CLCF1Q9UBD9 225 aa8.07□□□□□ -1.12
PDLIM5-207ENST00000503974 CFAP46Q8IYW2 2715 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 123.5 ms