RNA–Protein interactions for RNA: ENST00000502751.5

LMNA-219, Transcript of lamin A/C, human

TSL 4

Gene LMNA, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-219	ENST00000502751		G3V318	75 aa		12.84	□□□□□ -0.35
LMNA-219	ENST00000502751	GABARAP	H6UMI1	98 aa		12.84	□□□□□ -0.35
LMNA-219	ENST00000502751	SLC25A17	O43808	307 aa		12.84	□□□□□ -0.35
LMNA-219	ENST00000502751	CREBL2	O60519	120 aa	Predicted RBP	12.84	□□□□□ -0.35
LMNA-219	ENST00000502751	IGLV2-14	P01704	120 aa		12.84	□□□□□ -0.35
LMNA-219	ENST00000502751	PSMB8	P28062	276 aa		12.84	□□□□□ -0.35
LMNA-219	ENST00000502751	S100G	P29377	79 aa		12.84	□□□□□ -0.35
LMNA-219	ENST00000502751	PPIF	P30405	207 aa	Known RBP	12.84	□□□□□ -0.35
LMNA-219	ENST00000502751	CX3CL1	P78423	397 aa		12.84	□□□□□ -0.35
LMNA-219	ENST00000502751	VAX1	Q5SQQ9	334 aa		12.84	□□□□□ -0.35
LMNA-219	ENST00000502751	PPP1R27	Q86WC6	154 aa		12.84	□□□□□ -0.35
LMNA-219	ENST00000502751	CMTM1	Q8IZ96	169 aa		12.84	□□□□□ -0.35
LMNA-219	ENST00000502751	MFSD4A	Q8N468	514 aa		12.84	□□□□□ -0.35
LMNA-219	ENST00000502751	TCTEX1D1	Q8N7M0	179 aa		12.84	□□□□□ -0.35
LMNA-219	ENST00000502751	POC5	Q8NA72	575 aa		12.84	□□□□□ -0.35
LMNA-219	ENST00000502751	OR52I2	Q8NH67	350 aa		12.84	□□□□□ -0.35
LMNA-219	ENST00000502751	ABHD5	Q8WTS1	349 aa		12.84	□□□□□ -0.35
LMNA-219	ENST00000502751	AIFM2	Q9BRQ8	373 aa		12.84	□□□□□ -0.35
LMNA-219	ENST00000502751	MCRIP2	Q9BUT9	160 aa	Known RBP	12.84	□□□□□ -0.35
LMNA-219	ENST00000502751	NXF2	Q9GZY0	626 aa	Known RBP	12.84	□□□□□ -0.35
LMNA-219	ENST00000502751	RBM38	Q9H0Z9	239 aa	Known RBP	12.84	□□□□□ -0.35
LMNA-219	ENST00000502751	A3GALT2	U3KPV4	340 aa		12.84	□□□□□ -0.35
LMNA-219	ENST00000502751	CTDSPL	O15194	276 aa		12.83	□□□□□ -0.36
LMNA-219	ENST00000502751	S100A5	P33763	92 aa		12.83	□□□□□ -0.36
LMNA-219	ENST00000502751	UBE2K	P61086	200 aa		12.83	□□□□□ -0.36
LMNA-219	ENST00000502751	KIAA0141	Q14154	515 aa	Predicted RBP	12.83	□□□□□ -0.36
LMNA-219	ENST00000502751	DEFB136	Q30KP8	78 aa		12.83	□□□□□ -0.36
LMNA-219	ENST00000502751	RNASE12	Q5GAN4	147 aa	Known RBP	12.83	□□□□□ -0.36
LMNA-219	ENST00000502751	RNASE10	Q5GAN6	216 aa	Known RBP	12.83	□□□□□ -0.36
LMNA-219	ENST00000502751	TEX45	Q8NA69	505 aa		12.83	□□□□□ -0.36
LMNA-219	ENST00000502751	CLCC1	Q96S66	551 aa		12.83	□□□□□ -0.36
LMNA-219	ENST00000502751	GPR61	Q9BZJ8	451 aa		12.83	□□□□□ -0.36
LMNA-219	ENST00000502751	KLK15	Q9H2R5	256 aa		12.83	□□□□□ -0.36
LMNA-219	ENST00000502751	KLK11	Q9UBX7	282 aa		12.83	□□□□□ -0.36
LMNA-219	ENST00000502751	TRAV41	A0A0B4J266	112 aa		12.82	□□□□□ -0.36
LMNA-219	ENST00000502751	FABP12	A6NFH5	140 aa		12.82	□□□□□ -0.36
LMNA-219	ENST00000502751	ATP6V0E1	O15342	81 aa		12.82	□□□□□ -0.36
LMNA-219	ENST00000502751	TNFSF12	O43508	249 aa		12.82	□□□□□ -0.36
LMNA-219	ENST00000502751	CA2	P00918	260 aa		12.82	□□□□□ -0.36
LMNA-219	ENST00000502751	IGLV2-23	P01705	113 aa		12.82	□□□□□ -0.36
LMNA-219	ENST00000502751	TAS2R19	P59542	299 aa		12.82	□□□□□ -0.36
LMNA-219	ENST00000502751	RPL30	P62888	115 aa	Known RBP	12.82	□□□□□ -0.36
LMNA-219	ENST00000502751	EIF4EBP1	Q13541	118 aa	Predicted RBP	12.82	□□□□□ -0.36
LMNA-219	ENST00000502751	DEFB121	Q5J5C9	76 aa		12.82	□□□□□ -0.36
LMNA-219	ENST00000502751	ARRDC1	Q8N5I2	433 aa		12.82	□□□□□ -0.36
LMNA-219	ENST00000502751	VSTM2A	Q8TAG5	236 aa		12.82	□□□□□ -0.36
LMNA-219	ENST00000502751	CD300LF	Q8TDQ1	290 aa		12.82	□□□□□ -0.36
LMNA-219	ENST00000502751	FCN1	O00602	326 aa		12.81	□□□□□ -0.36
LMNA-219	ENST00000502751	RBFOX2	O43251	390 aa	Known RBP eCLIP	12.81	□□□□□ -0.36
LMNA-219	ENST00000502751	CNIH1	O95406	144 aa		12.81	□□□□□ -0.36
LMNA-219	ENST00000502751	HRAS	P01112	189 aa		12.81	□□□□□ -0.36
LMNA-219	ENST00000502751	IGLV1-40	P01703	118 aa		12.81	□□□□□ -0.36
LMNA-219	ENST00000502751	CD40LG	P29965	261 aa		12.81	□□□□□ -0.36
LMNA-219	ENST00000502751	TNFSF8	P32971	234 aa		12.81	□□□□□ -0.36
LMNA-219	ENST00000502751	CRIP2	P52943	208 aa	Predicted RBP	12.81	□□□□□ -0.36
LMNA-219	ENST00000502751	FXYD3	Q14802	87 aa		12.81	□□□□□ -0.36
LMNA-219	ENST00000502751	OR2B11	Q5JQS5	317 aa		12.81	□□□□□ -0.36
LMNA-219	ENST00000502751	AADACL3	Q5VUY0	350 aa		12.81	□□□□□ -0.36
LMNA-219	ENST00000502751	TMEM65	Q6PI78	240 aa		12.81	□□□□□ -0.36
LMNA-219	ENST00000502751	ZNF818P	Q6ZRF7	136 aa		12.81	□□□□□ -0.36
LMNA-219	ENST00000502751	TMEM229B	Q8NBD8	167 aa		12.81	□□□□□ -0.36
LMNA-219	ENST00000502751	MYOZ3	Q8TDC0	251 aa		12.81	□□□□□ -0.36
LMNA-219	ENST00000502751	SMIM4	Q8WVI0	70 aa		12.81	□□□□□ -0.36
LMNA-219	ENST00000502751	ARPC1A	Q92747	370 aa		12.81	□□□□□ -0.36
LMNA-219	ENST00000502751	DPF1	Q92782	380 aa		12.81	□□□□□ -0.36
LMNA-219	ENST00000502751	DGCR14	Q96DF8	476 aa	Known RBP	12.81	□□□□□ -0.36
LMNA-219	ENST00000502751	GPR31	O00270	319 aa		12.8	□□□□□ -0.36
LMNA-219	ENST00000502751	ACTL6B	O94805	426 aa		12.8	□□□□□ -0.36
LMNA-219	ENST00000502751	CD3D	P04234	171 aa		12.8	□□□□□ -0.36
LMNA-219	ENST00000502751	CRYGB	P07316	175 aa		12.8	□□□□□ -0.36
LMNA-219	ENST00000502751	GNRHR	P30968	328 aa		12.8	□□□□□ -0.36
LMNA-219	ENST00000502751	UCP3	P55916	312 aa		12.8	□□□□□ -0.36
LMNA-219	ENST00000502751	RAB25	P57735	213 aa		12.8	□□□□□ -0.36
LMNA-219	ENST00000502751	ECSCR	Q19T08	205 aa		12.8	□□□□□ -0.36
LMNA-219	ENST00000502751	SLC38A6	Q8IZM9	456 aa		12.8	□□□□□ -0.36
LMNA-219	ENST00000502751	SPAG16	Q8N0X2	631 aa		12.8	□□□□□ -0.36
LMNA-219	ENST00000502751	ZNF491	Q8N8L2	437 aa		12.8	□□□□□ -0.36
LMNA-219	ENST00000502751	MINDY2	Q8NBR6	621 aa		12.8	□□□□□ -0.36
LMNA-219	ENST00000502751	C4orf3	Q8WVX3	66 aa		12.8	□□□□□ -0.36
LMNA-219	ENST00000502751	TMEM68	Q96MH6	324 aa		12.8	□□□□□ -0.36
LMNA-219	ENST00000502751	SRRM4	A7MD48	611 aa	Known RBP	12.79	□□□□□ -0.36
LMNA-219	ENST00000502751		M0QYG6	137 aa		12.79	□□□□□ -0.36
LMNA-219	ENST00000502751	RAB3D	O95716	219 aa		12.79	□□□□□ -0.36
LMNA-219	ENST00000502751	HPRT1	P00492	218 aa		12.79	□□□□□ -0.36
LMNA-219	ENST00000502751	RAB9A	P51151	201 aa		12.79	□□□□□ -0.36
LMNA-219	ENST00000502751	GNB1	P62873	340 aa		12.79	□□□□□ -0.36
LMNA-219	ENST00000502751	DGCR2	P98153	550 aa		12.79	□□□□□ -0.36
LMNA-219	ENST00000502751	MEF2D	Q14814	521 aa		12.79	□□□□□ -0.36
LMNA-219	ENST00000502751	AKIRIN2	Q53H80	203 aa		12.79	□□□□□ -0.36
LMNA-219	ENST00000502751	MMD2	Q8IY49	270 aa		12.79	□□□□□ -0.36
LMNA-219	ENST00000502751	OR5M8	Q8NGP6	311 aa		12.79	□□□□□ -0.36
LMNA-219	ENST00000502751	UBE2E2	Q96LR5	201 aa		12.79	□□□□□ -0.36
LMNA-219	ENST00000502751	GNB4	Q9HAV0	340 aa		12.79	□□□□□ -0.36
LMNA-219	ENST00000502751	FOXA2	Q9Y261	457 aa	Predicted RBP	12.79	□□□□□ -0.36
LMNA-219	ENST00000502751	FBXO7	Q9Y3I1	522 aa		12.79	□□□□□ -0.36
LMNA-219	ENST00000502751	NUBP2	Q9Y5Y2	271 aa		12.79	□□□□□ -0.36
LMNA-219	ENST00000502751	GSTZ1	O43708	216 aa	Predicted RBP	12.78	□□□□□ -0.36
LMNA-219	ENST00000502751	CD74	P04233	296 aa		12.78	□□□□□ -0.36
LMNA-219	ENST00000502751	SAA1	P0DJI8	122 aa	Predicted RBP	12.78	□□□□□ -0.36
LMNA-219	ENST00000502751	EGR2	P11161	476 aa	Predicted RBP	12.78	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms