RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 PDCD6O75340 191 aa3.23□□□□□ -1.89
HMGB1P21-201ENST00000502313 TNFSF13O75888 250 aa3.23□□□□□ -1.89
HMGB1P21-201ENST00000502313 OR2B3O76000 313 aa3.23□□□□□ -1.89
HMGB1P21-201ENST00000502313 ZFAND5O76080 213 aa3.23□□□□□ -1.89
HMGB1P21-201ENST00000502313 S1PR2O95136 353 aa3.23□□□□□ -1.89
HMGB1P21-201ENST00000502313 IGHV3-43DP0DP04 118 aa3.23□□□□□ -1.89
HMGB1P21-201ENST00000502313 GTF2F2P13984 249 aa3.23□□□□□ -1.89
HMGB1P21-201ENST00000502313 PGAM2P15259 253 aa3.23□□□□□ -1.89
HMGB1P21-201ENST00000502313 COX7A1P24310 79 aa3.23□□□□□ -1.89
HMGB1P21-201ENST00000502313 FKBP2P26885 142 aaKnown RBP3.23□□□□□ -1.89
HMGB1P21-201ENST00000502313 POLR2IP36954 125 aaKnown RBP3.23□□□□□ -1.89
HMGB1P21-201ENST00000502313 COPZ1P61923 177 aa3.23□□□□□ -1.89
HMGB1P21-201ENST00000502313 GNG3P63215 75 aa3.23□□□□□ -1.89
HMGB1P21-201ENST00000502313 CD47Q08722 323 aa3.23□□□□□ -1.89
HMGB1P21-201ENST00000502313 PMVKQ15126 192 aa3.23□□□□□ -1.89
HMGB1P21-201ENST00000502313 PRR4Q16378 134 aa3.23□□□□□ -1.89
HMGB1P21-201ENST00000502313 GUCA2BQ16661 112 aa3.23□□□□□ -1.89
HMGB1P21-201ENST00000502313 C6orf99Q4VX62 202 aa3.23□□□□□ -1.89
HMGB1P21-201ENST00000502313 RSBN1Q5VWQ0 802 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P21-201ENST00000502313 CYB5R2Q6BCY4 276 aa3.23□□□□□ -1.89
HMGB1P21-201ENST00000502313 SLC48A1Q6P1K1 146 aa3.23□□□□□ -1.89
HMGB1P21-201ENST00000502313 IZUMO2Q6UXV1 221 aa3.23□□□□□ -1.89
HMGB1P21-201ENST00000502313 FBXW12Q6X9E4 464 aa3.23□□□□□ -1.89
HMGB1P21-201ENST00000502313 ZNF493Q6ZR52 646 aa3.23□□□□□ -1.89
HMGB1P21-201ENST00000502313 KRTCAP2Q8N6L1 136 aa3.23□□□□□ -1.89
HMGB1P21-201ENST00000502313 OR9I1Q8NGQ6 314 aa3.23□□□□□ -1.89
HMGB1P21-201ENST00000502313 FXYD5Q96DB9 178 aa3.23□□□□□ -1.89
HMGB1P21-201ENST00000502313 MS4A6EQ96DS6 147 aa3.23□□□□□ -1.89
HMGB1P21-201ENST00000502313 NEURL3Q96EH8 262 aa3.23□□□□□ -1.89
HMGB1P21-201ENST00000502313 PDXPQ96GD0 296 aa3.23□□□□□ -1.89
HMGB1P21-201ENST00000502313 TEX37Q96LM6 180 aa3.23□□□□□ -1.89
HMGB1P21-201ENST00000502313 ARHGDIGQ99819 225 aa3.23□□□□□ -1.89
HMGB1P21-201ENST00000502313 CMSS1Q9BQ75 279 aaKnown RBP3.23□□□□□ -1.89
HMGB1P21-201ENST00000502313 RTBDNQ9BSG5 229 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P21-201ENST00000502313 LRRC61Q9BV99 259 aa3.23□□□□□ -1.89
HMGB1P21-201ENST00000502313 MS4A8Q9BY19 250 aa3.23□□□□□ -1.89
HMGB1P21-201ENST00000502313 SLC25A31Q9H0C2 315 aa3.23□□□□□ -1.89
HMGB1P21-201ENST00000502313 DCSTAMPQ9H295 470 aa3.23□□□□□ -1.89
HMGB1P21-201ENST00000502313 FGF22Q9HCT0 170 aa3.23□□□□□ -1.89
HMGB1P21-201ENST00000502313 CCL28Q9NRJ3 127 aa3.23□□□□□ -1.89
HMGB1P21-201ENST00000502313 CACNG5Q9UF02 275 aa3.23□□□□□ -1.89
HMGB1P21-201ENST00000502313 KLK13Q9UKR3 277 aa3.23□□□□□ -1.89
HMGB1P21-201ENST00000502313 DYSFO75923 2080 aa3.23□□□□□ -1.89
HMGB1P21-201ENST00000502313 PTPN13Q12923 2485 aa3.22□□□□□ -1.89
HMGB1P21-201ENST00000502313 USP9YO00507 2555 aaPredicted RBP3.22□□□□□ -1.89
HMGB1P21-201ENST00000502313 TP53BP1Q12888 1972 aaPredicted RBP3.22□□□□□ -1.89
HMGB1P21-201ENST00000502313 SCN8AQ9UQD0 1980 aa3.22□□□□□ -1.89
HMGB1P21-201ENST00000502313 HECTD1Q9ULT8 2610 aa3.22□□□□□ -1.89
HMGB1P21-201ENST00000502313 IGKV1-27A0A075B6S5 117 aa3.22□□□□□ -1.89
HMGB1P21-201ENST00000502313 IGHV1-69DA0A0B4J2H0 117 aa3.22□□□□□ -1.89
HMGB1P21-201ENST00000502313 A0A0U1RQV1 116 aa3.22□□□□□ -1.89
HMGB1P21-201ENST00000502313 LOC100130705A0A1B0GUX0 176 aa3.22□□□□□ -1.89
HMGB1P21-201ENST00000502313 SMIM31A0A1B0GVY4 71 aa3.22□□□□□ -1.89
HMGB1P21-201ENST00000502313 TLCD2A6NGC4 264 aa3.22□□□□□ -1.89
HMGB1P21-201ENST00000502313 FAM183AA6NL82 134 aa3.22□□□□□ -1.89
HMGB1P21-201ENST00000502313 H0YGG7 62 aa3.22□□□□□ -1.89
HMGB1P21-201ENST00000502313 GCM2O75603 506 aaPredicted RBP3.22□□□□□ -1.89
HMGB1P21-201ENST00000502313 EPPINO95925 133 aa3.22□□□□□ -1.89
HMGB1P21-201ENST00000502313 DBIP07108 87 aaKnown RBP3.22□□□□□ -1.89
HMGB1P21-201ENST00000502313 IL3P08700 152 aa3.22□□□□□ -1.89
HMGB1P21-201ENST00000502313 TFPTP0C1Z6 253 aa3.22□□□□□ -1.89
HMGB1P21-201ENST00000502313 LINC00614P0C842 121 aa3.22□□□□□ -1.89
HMGB1P21-201ENST00000502313 CHTF8P0CG12 524 aa3.22□□□□□ -1.89
HMGB1P21-201ENST00000502313 RNF224P0DH78 156 aa3.22□□□□□ -1.89
HMGB1P21-201ENST00000502313 RAB3AP20336 220 aa3.22□□□□□ -1.89
HMGB1P21-201ENST00000502313 CRABP1P29762 137 aa3.22□□□□□ -1.89
HMGB1P21-201ENST00000502313 CDC42P60953 191 aa3.22□□□□□ -1.89
HMGB1P21-201ENST00000502313 HBA1P69905 142 aa3.22□□□□□ -1.89
HMGB1P21-201ENST00000502313 EGFEM1PQ0D2K5 195 aa3.22□□□□□ -1.89
HMGB1P21-201ENST00000502313 LY6DQ14210 128 aa3.22□□□□□ -1.89
HMGB1P21-201ENST00000502313 GINS1Q14691 196 aa3.22□□□□□ -1.89
HMGB1P21-201ENST00000502313 HERPUD1Q15011 391 aa3.22□□□□□ -1.89
HMGB1P21-201ENST00000502313 RBMY1FQ15415 496 aaKnown RBP3.22□□□□□ -1.89
HMGB1P21-201ENST00000502313 CCSMST1Q4G0I0 132 aa3.22□□□□□ -1.89
HMGB1P21-201ENST00000502313 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.22□□□□□ -1.89
HMGB1P21-201ENST00000502313 ELP2Q6IA86 826 aa3.22□□□□□ -1.89
HMGB1P21-201ENST00000502313 CLEC19AQ6UXS0 136 aa3.22□□□□□ -1.89
HMGB1P21-201ENST00000502313 GSG1LQ6UXU4 331 aa3.22□□□□□ -1.89
HMGB1P21-201ENST00000502313 SPNS3Q6ZMD2 512 aa3.22□□□□□ -1.89
HMGB1P21-201ENST00000502313 ZNF550Q7Z398 422 aa3.22□□□□□ -1.89
HMGB1P21-201ENST00000502313 CALHM3Q86XJ0 350 aa3.22□□□□□ -1.89
HMGB1P21-201ENST00000502313 ZNF440Q8IYI8 595 aa3.22□□□□□ -1.89
HMGB1P21-201ENST00000502313 C8orf59Q8N0T1 100 aaPredicted RBP3.22□□□□□ -1.89
HMGB1P21-201ENST00000502313 CADM2Q8N3J6 435 aa3.22□□□□□ -1.89
HMGB1P21-201ENST00000502313 OR10G9Q8NGN4 311 aa3.22□□□□□ -1.89
HMGB1P21-201ENST00000502313 OR13D1Q8NGV5 346 aa3.22□□□□□ -1.89
HMGB1P21-201ENST00000502313 OR10D3Q8NH80 312 aa3.22□□□□□ -1.89
HMGB1P21-201ENST00000502313 OR1S1Q8NH92 325 aa3.22□□□□□ -1.89
HMGB1P21-201ENST00000502313 CCL17Q92583 94 aa3.22□□□□□ -1.89
HMGB1P21-201ENST00000502313 BORCS5Q969J3 196 aa3.22□□□□□ -1.89
HMGB1P21-201ENST00000502313 EXOSC8Q96B26 276 aaKnown RBP3.22□□□□□ -1.89
HMGB1P21-201ENST00000502313 GALNT14Q96FL9 552 aa3.22□□□□□ -1.89
HMGB1P21-201ENST00000502313 MRPL48Q96GC5 212 aaKnown RBP3.22□□□□□ -1.89
HMGB1P21-201ENST00000502313 BTF3L4Q96K17 158 aa3.22□□□□□ -1.89
HMGB1P21-201ENST00000502313 LINC00477Q96M19 166 aa3.22□□□□□ -1.89
HMGB1P21-201ENST00000502313 OR2A5Q96R48 311 aa3.22□□□□□ -1.89
HMGB1P21-201ENST00000502313 TBX5Q99593 518 aa3.22□□□□□ -1.89
HMGB1P21-201ENST00000502313 EBPLQ9BY08 206 aa3.22□□□□□ -1.89
HMGB1P21-201ENST00000502313 ABCG5Q9H222 651 aa3.22□□□□□ -1.89
HMGB1P21-201ENST00000502313 Q9H3A6 140 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms