RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 KIAA0141Q14154 515 aaPredicted RBP9.98□□□□□ -0.81
HSPG2-213ENST00000498495 TNXAQ16473 311 aa9.98□□□□□ -0.81
HSPG2-213ENST00000498495 PRSS8Q16651 343 aa9.98□□□□□ -0.81
HSPG2-213ENST00000498495 C19orf54Q5BKX5 351 aa9.98□□□□□ -0.81
HSPG2-213ENST00000498495 RNASE12Q5GAN4 147 aaKnown RBP9.98□□□□□ -0.81
HSPG2-213ENST00000498495 PYHIN1Q6K0P9 492 aa9.98□□□□□ -0.81
HSPG2-213ENST00000498495 ETV3LQ6ZN32 361 aa9.98□□□□□ -0.81
HSPG2-213ENST00000498495 IDO2Q6ZQW0 420 aa9.98□□□□□ -0.81
HSPG2-213ENST00000498495 ZNF818PQ6ZRF7 136 aa9.98□□□□□ -0.81
HSPG2-213ENST00000498495 SPAG16Q8N0X2 631 aa9.98□□□□□ -0.81
HSPG2-213ENST00000498495 LINC00482Q8N8I6 264 aa9.98□□□□□ -0.81
HSPG2-213ENST00000498495 VSTM2AQ8TAG5 236 aa9.98□□□□□ -0.81
HSPG2-213ENST00000498495 DYNC2LI1Q8TCX1 351 aa9.98□□□□□ -0.81
HSPG2-213ENST00000498495 C4orf3Q8WVX3 66 aa9.98□□□□□ -0.81
HSPG2-213ENST00000498495 MOB3AQ96BX8 217 aa9.98□□□□□ -0.81
HSPG2-213ENST00000498495 TMEM68Q96MH6 324 aa9.98□□□□□ -0.81
HSPG2-213ENST00000498495 MS4A10Q96PG2 267 aa9.98□□□□□ -0.81
HSPG2-213ENST00000498495 DUX3Q96PT4 197 aa9.98□□□□□ -0.81
HSPG2-213ENST00000498495 ABHD1Q96SE0 405 aa9.98□□□□□ -0.81
HSPG2-213ENST00000498495 P2RX4Q99571 388 aa9.98□□□□□ -0.81
HSPG2-213ENST00000498495 PHB2Q99623 299 aa9.98□□□□□ -0.81
HSPG2-213ENST00000498495 AIFM2Q9BRQ8 373 aa9.98□□□□□ -0.81
HSPG2-213ENST00000498495 MIXL1Q9H2W2 232 aa9.98□□□□□ -0.81
HSPG2-213ENST00000498495 ZNF355PQ9NSJ1 428 aa9.98□□□□□ -0.81
HSPG2-213ENST00000498495 MGAM2Q2M2H8 2515 aa9.97□□□□□ -0.81
HSPG2-213ENST00000498495 PLXNB1O43157 2135 aa9.97□□□□□ -0.81
HSPG2-213ENST00000498495 CCDC160A6NGH7 325 aa9.97□□□□□ -0.81
HSPG2-213ENST00000498495 MSGN1A6NI15 193 aa9.97□□□□□ -0.81
HSPG2-213ENST00000498495 OR2A4O95047 310 aa9.97□□□□□ -0.81
HSPG2-213ENST00000498495 DUS4LO95620 317 aaKnown RBP9.97□□□□□ -0.81
HSPG2-213ENST00000498495 HRASP01112 189 aa9.97□□□□□ -0.81
HSPG2-213ENST00000498495 SAA1P0DJI8 122 aaPredicted RBP9.97□□□□□ -0.81
HSPG2-213ENST00000498495 RAB25P57735 213 aa9.97□□□□□ -0.81
HSPG2-213ENST00000498495 BRWD1-AS2P59051 145 aa9.97□□□□□ -0.81
HSPG2-213ENST00000498495 DEFB136Q30KP8 78 aa9.97□□□□□ -0.81
HSPG2-213ENST00000498495 BEAN1Q3B7T3 259 aa9.97□□□□□ -0.81
HSPG2-213ENST00000498495 AADACL3Q5VUY0 350 aa9.97□□□□□ -0.81
HSPG2-213ENST00000498495 LPCAT3Q6P1A2 487 aa9.97□□□□□ -0.81
HSPG2-213ENST00000498495 MMD2Q8IY49 270 aa9.97□□□□□ -0.81
HSPG2-213ENST00000498495 CMTM1Q8IZ96 169 aa9.97□□□□□ -0.81
HSPG2-213ENST00000498495 VKORC1L1Q8N0U8 176 aa9.97□□□□□ -0.81
HSPG2-213ENST00000498495 POC5Q8NA72 575 aa9.97□□□□□ -0.81
HSPG2-213ENST00000498495 OR5T1Q8NG75 326 aa9.97□□□□□ -0.81
HSPG2-213ENST00000498495 OR11H1Q8NG94 326 aa9.97□□□□□ -0.81
HSPG2-213ENST00000498495 MYOZ3Q8TDC0 251 aa9.97□□□□□ -0.81
HSPG2-213ENST00000498495 CASTOR1Q8WTX7 329 aa9.97□□□□□ -0.81
HSPG2-213ENST00000498495 FCAMRQ8WWV6 532 aa9.97□□□□□ -0.81
HSPG2-213ENST00000498495 ISOC1Q96CN7 298 aa9.97□□□□□ -0.81
HSPG2-213ENST00000498495 DIRAS2Q96HU8 199 aa9.97□□□□□ -0.81
HSPG2-213ENST00000498495 RCC1LQ96I51 464 aaKnown RBP9.97□□□□□ -0.81
HSPG2-213ENST00000498495 RAX2Q96IS3 184 aa9.97□□□□□ -0.81
HSPG2-213ENST00000498495 OR5B12Q96R08 314 aa9.97□□□□□ -0.81
HSPG2-213ENST00000498495 OR2A7Q96R45 310 aa9.97□□□□□ -0.81
HSPG2-213ENST00000498495 SLA2Q9H6Q3 261 aa9.97□□□□□ -0.81
HSPG2-213ENST00000498495 CCDC59Q9P031 241 aaKnown RBP9.97□□□□□ -0.81
HSPG2-213ENST00000498495 KLK11Q9UBX7 282 aa9.97□□□□□ -0.81
HSPG2-213ENST00000498495 CEPT1Q9Y6K0 416 aa9.97□□□□□ -0.81
HSPG2-213ENST00000498495 PKD1L1Q8TDX9 2849 aa9.96□□□□□ -0.81
HSPG2-213ENST00000498495 H3BMQ9 156 aa9.96□□□□□ -0.82
HSPG2-213ENST00000498495 HPRT1P00492 218 aa9.96□□□□□ -0.82
HSPG2-213ENST00000498495 IFNA6P05013 189 aa9.96□□□□□ -0.82
HSPG2-213ENST00000498495 SSBP2P81877 361 aaPredicted RBP9.96□□□□□ -0.82
HSPG2-213ENST00000498495 MRGPRG-AS1Q2M3A8 158 aa9.96□□□□□ -0.82
HSPG2-213ENST00000498495 SSX9Q7RTT3 188 aa9.96□□□□□ -0.82
HSPG2-213ENST00000498495 LAX1Q8IWV1 398 aa9.96□□□□□ -0.82
HSPG2-213ENST00000498495 OR1N2Q8NGR9 330 aa9.96□□□□□ -0.82
HSPG2-213ENST00000498495 OR51H1Q8NH63 302 aa9.96□□□□□ -0.82
HSPG2-213ENST00000498495 OR52I2Q8NH67 350 aa9.96□□□□□ -0.82
HSPG2-213ENST00000498495 CD300LFQ8TDQ1 290 aa9.96□□□□□ -0.82
HSPG2-213ENST00000498495 SRSF12Q8WXF0 261 aaKnown RBP9.96□□□□□ -0.82
HSPG2-213ENST00000498495 RHOVQ96L33 236 aa9.96□□□□□ -0.82
HSPG2-213ENST00000498495 MCRIP2Q9BUT9 160 aaKnown RBP9.96□□□□□ -0.82
HSPG2-213ENST00000498495 C6orf62Q9GZU0 229 aaPredicted RBP9.96□□□□□ -0.82
HSPG2-213ENST00000498495 ZNF430Q9H8G1 570 aaPredicted RBP9.96□□□□□ -0.82
HSPG2-213ENST00000498495 GNB4Q9HAV0 340 aa9.96□□□□□ -0.82
HSPG2-213ENST00000498495 MTFP1Q9UDX5 166 aa9.96□□□□□ -0.82
HSPG2-213ENST00000498495 NBEAL1Q6ZS30 2694 aa9.96□□□□□ -0.82
HSPG2-213ENST00000498495 GPR31O00270 319 aa9.95□□□□□ -0.82
HSPG2-213ENST00000498495 MPPED1O15442 326 aa9.95□□□□□ -0.82
HSPG2-213ENST00000498495 RBFOX2O43251 390 aaKnown RBP eCLIP9.95□□□□□ -0.826e-7■■■□□ 15.8
HSPG2-213ENST00000498495 RAMP3O60896 148 aa9.95□□□□□ -0.82
HSPG2-213ENST00000498495 PGLYRP1O75594 196 aaPredicted RBP9.95□□□□□ -0.82
HSPG2-213ENST00000498495 TRGV3P03979 118 aa9.95□□□□□ -0.82
HSPG2-213ENST00000498495 APELAP0DMC3 54 aa9.95□□□□□ -0.82
HSPG2-213ENST00000498495 S100GP29377 79 aa9.95□□□□□ -0.82
HSPG2-213ENST00000498495 TPPP2P59282 170 aa9.95□□□□□ -0.82
HSPG2-213ENST00000498495 VAX1Q5SQQ9 334 aa9.95□□□□□ -0.82
HSPG2-213ENST00000498495 DPF1Q92782 380 aa9.95□□□□□ -0.82
HSPG2-213ENST00000498495 RABL2AQ9UBK7 228 aaPredicted RBP9.95□□□□□ -0.82
HSPG2-213ENST00000498495 RABL2BQ9UNT1 228 aa9.95□□□□□ -0.82
HSPG2-213ENST00000498495 CMYA5Q8N3K9 4069 aa9.95□□□□□ -0.82
HSPG2-213ENST00000498495 H3BUA1 57 aa9.94□□□□□ -0.82
HSPG2-213ENST00000498495 GABARAPH6UMI1 98 aa9.94□□□□□ -0.82
HSPG2-213ENST00000498495 I3L521 148 aa9.94□□□□□ -0.82
HSPG2-213ENST00000498495 M0QYG6 137 aa9.94□□□□□ -0.82
HSPG2-213ENST00000498495 WIPF1O43516 503 aa9.94□□□□□ -0.82
HSPG2-213ENST00000498495 KBTBD11O94819 623 aa9.94□□□□□ -0.82
HSPG2-213ENST00000498495 NQO2P16083 231 aa9.94□□□□□ -0.82
HSPG2-213ENST00000498495 TAS2R31P59538 309 aa9.94□□□□□ -0.82
HSPG2-213ENST00000498495 MRPS10P82664 201 aaKnown RBP9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms