RNA–Protein interactions for RNA: ENST00000498020.1

HLA-DMB-262, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 4,569 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-262ENST00000498020 IGHV3-43DP0DP04 118 aa6.77□□□□□ -1.32
HLA-DMB-262ENST00000498020 DAOP14920 347 aa6.77□□□□□ -1.32
HLA-DMB-262ENST00000498020 RAB5AP20339 215 aa6.77□□□□□ -1.32
HLA-DMB-262ENST00000498020 MIDNQ504T8 468 aa6.77□□□□□ -1.32
HLA-DMB-262ENST00000498020 SSX7Q7RTT5 188 aa6.77□□□□□ -1.32
HLA-DMB-262ENST00000498020 DTX1Q86Y01 620 aa6.77□□□□□ -1.32
HLA-DMB-262ENST00000498020 C11orf42Q8N5U0 333 aa6.77□□□□□ -1.32
HLA-DMB-262ENST00000498020 ZBTB34Q8NCN2 500 aa6.77□□□□□ -1.32
HLA-DMB-262ENST00000498020 OR8G5Q8NG78 346 aa6.77□□□□□ -1.32
HLA-DMB-262ENST00000498020 NRGNQ92686 78 aa6.77□□□□□ -1.32
HLA-DMB-262ENST00000498020 IL22RA2Q969J5 263 aa6.77□□□□□ -1.32
HLA-DMB-262ENST00000498020 PARP11Q9NR21 331 aa6.77□□□□□ -1.32
HLA-DMB-262ENST00000498020 ARL2-SNX15V9GYD0 113 aa6.77□□□□□ -1.32
HLA-DMB-262ENST00000498020 FREM1Q5H8C1 2179 aa6.77□□□□□ -1.33
HLA-DMB-262ENST00000498020 IGHV3OR15-7A0A075B7D8 119 aa6.77□□□□□ -1.33
HLA-DMB-262ENST00000498020 A0A1B0GU03 582 aa6.77□□□□□ -1.33
HLA-DMB-262ENST00000498020 CLDN34H7C241 214 aa6.77□□□□□ -1.33
HLA-DMB-262ENST00000498020 OR2J3O76001 311 aa6.77□□□□□ -1.33
HLA-DMB-262ENST00000498020 MMP9P14780 707 aa6.77□□□□□ -1.33
HLA-DMB-262ENST00000498020 IGHV1-2P23083 117 aa6.77□□□□□ -1.33
HLA-DMB-262ENST00000498020 CD200P41217 278 aa6.77□□□□□ -1.33
HLA-DMB-262ENST00000498020 EWSR1Q01844 656 aaKnown RBP eCLIP6.77□□□□□ -1.33
HLA-DMB-262ENST00000498020 FOXF2Q12947 444 aa6.77□□□□□ -1.33
HLA-DMB-262ENST00000498020 CENPVQ7Z7K6 275 aaPredicted RBP6.77□□□□□ -1.33
HLA-DMB-262ENST00000498020 LRTM2Q8N967 370 aa6.77□□□□□ -1.33
HLA-DMB-262ENST00000498020 B9A039 149 aa6.77□□□□□ -1.33
HLA-DMB-262ENST00000498020 RCC1P18754 421 aaPredicted RBP6.77□□□□□ -1.33
HLA-DMB-262ENST00000498020 ANOS1P23352 680 aa6.77□□□□□ -1.33
HLA-DMB-262ENST00000498020 LGALS7P47929 136 aa6.77□□□□□ -1.33
HLA-DMB-262ENST00000498020 CDC34P49427 236 aaPredicted RBP6.77□□□□□ -1.33
HLA-DMB-262ENST00000498020 SPCS3P61009 180 aa6.77□□□□□ -1.33
HLA-DMB-262ENST00000498020 ZNF429Q86V71 674 aa6.77□□□□□ -1.33
HLA-DMB-262ENST00000498020 KLF14Q8TD94 323 aaPredicted RBP6.77□□□□□ -1.33
HLA-DMB-262ENST00000498020 MARS2Q96GW9 593 aaKnown RBP6.77□□□□□ -1.33
HLA-DMB-262ENST00000498020 FAM103A1Q9BTL3 118 aaKnown RBP6.77□□□□□ -1.33
HLA-DMB-262ENST00000498020 OOEPA6NGQ2 149 aa6.77□□□□□ -1.33
HLA-DMB-262ENST00000498020 DNASE2O00115 360 aaPredicted RBP6.77□□□□□ -1.33
HLA-DMB-262ENST00000498020 LY6HO94772 140 aa6.77□□□□□ -1.33
HLA-DMB-262ENST00000498020 WNT5AP41221 380 aa6.77□□□□□ -1.33
HLA-DMB-262ENST00000498020 AMTP48728 403 aa6.77□□□□□ -1.33
HLA-DMB-262ENST00000498020 PTTG1IPP53801 180 aa6.77□□□□□ -1.33
HLA-DMB-262ENST00000498020 TMEM267Q0VDI3 215 aaPredicted RBP6.77□□□□□ -1.33
HLA-DMB-262ENST00000498020 KRTAP27-1Q3LI81 207 aa6.77□□□□□ -1.33
HLA-DMB-262ENST00000498020 RNF212Q495C1 297 aa6.77□□□□□ -1.33
HLA-DMB-262ENST00000498020 FAM209AQ5JX71 171 aa6.77□□□□□ -1.33
HLA-DMB-262ENST00000498020 TMEM88Q6PEY1 159 aa6.77□□□□□ -1.33
HLA-DMB-262ENST00000498020 NOL4LQ96MY1 436 aaPredicted RBP6.77□□□□□ -1.33
HLA-DMB-262ENST00000498020 RNF2Q99496 336 aa6.77□□□□□ -1.33
HLA-DMB-262ENST00000498020 RNF7Q9UBF6 113 aa6.77□□□□□ -1.33
HLA-DMB-262ENST00000498020 PGLYRP1O75594 196 aaPredicted RBP6.76□□□□□ -1.33
HLA-DMB-262ENST00000498020 TOX4O94842 621 aa6.76□□□□□ -1.33
HLA-DMB-262ENST00000498020 CD40P25942 277 aa6.76□□□□□ -1.33
HLA-DMB-262ENST00000498020 SUMO1P63165 101 aaKnown RBP6.76□□□□□ -1.33
HLA-DMB-262ENST00000498020 ITLN1Q8WWA0 313 aa6.76□□□□□ -1.33
HLA-DMB-262ENST00000498020 TP53RKQ96S44 253 aa6.76□□□□□ -1.33
HLA-DMB-262ENST00000498020 TMUB1Q9BVT8 246 aa6.76□□□□□ -1.33
HLA-DMB-262ENST00000498020 TEP1Q99973 2627 aaKnown RBP6.76□□□□□ -1.33
HLA-DMB-262ENST00000498020 TRAV39A0A0B4J263 110 aa6.76□□□□□ -1.33
HLA-DMB-262ENST00000498020 CHST1O43916 411 aa6.76□□□□□ -1.33
HLA-DMB-262ENST00000498020 FOXH1O75593 365 aa6.76□□□□□ -1.33
HLA-DMB-262ENST00000498020 RPL13AP40429 203 aaKnown RBP6.76□□□□□ -1.33
HLA-DMB-262ENST00000498020 ZNF818PQ6ZRF7 136 aa6.76□□□□□ -1.33
HLA-DMB-262ENST00000498020 TGIF2LYQ8IUE0 185 aa6.76□□□□□ -1.33
HLA-DMB-262ENST00000498020 TGIF2LXQ8IUE1 241 aa6.76□□□□□ -1.33
HLA-DMB-262ENST00000498020 SELENOHQ8IZQ5 122 aaKnown RBP6.76□□□□□ -1.33
HLA-DMB-262ENST00000498020 WFIKKN1Q96NZ8 548 aa6.76□□□□□ -1.33
HLA-DMB-262ENST00000498020 SYNGR2O43760 224 aa6.76□□□□□ -1.33
HLA-DMB-262ENST00000498020 IGHG3P01860 377 aa6.76□□□□□ -1.33
HLA-DMB-262ENST00000498020 UCP1P25874 307 aa6.76□□□□□ -1.33
HLA-DMB-262ENST00000498020 ZNF154Q13106 437 aa6.76□□□□□ -1.33
HLA-DMB-262ENST00000498020 TNXAQ16473 311 aa6.76□□□□□ -1.33
HLA-DMB-262ENST00000498020 TMEM241Q24JQ0 296 aa6.76□□□□□ -1.33
HLA-DMB-262ENST00000498020 Q6ZS49 121 aa6.76□□□□□ -1.33
HLA-DMB-262ENST00000498020 OR52M1Q8NGK5 317 aa6.76□□□□□ -1.33
HLA-DMB-262ENST00000498020 OR2V2Q96R30 315 aa6.76□□□□□ -1.33
HLA-DMB-262ENST00000498020 SEC11CQ9BY50 192 aa6.76□□□□□ -1.33
HLA-DMB-262ENST00000498020 IL36RNQ9UBH0 155 aa6.76□□□□□ -1.33
HLA-DMB-262ENST00000498020 CDC42EP3Q9UKI2 254 aa6.76□□□□□ -1.33
HLA-DMB-262ENST00000498020 PRRC2CQ9Y520 2896 aaKnown RBP6.76□□□□□ -1.33
HLA-DMB-262ENST00000498020 NCOA6Q14686 2063 aaPredicted RBP6.76□□□□□ -1.33
HLA-DMB-262ENST00000498020 IQCF6A8MYZ5 107 aa6.76□□□□□ -1.33
HLA-DMB-262ENST00000498020 F5H697 171 aa6.76□□□□□ -1.33
HLA-DMB-262ENST00000498020 SOX15O60248 233 aa6.76□□□□□ -1.33
HLA-DMB-262ENST00000498020 RHBDL1O75783 438 aa6.76□□□□□ -1.33
HLA-DMB-262ENST00000498020 NAPSAO96009 420 aa6.76□□□□□ -1.33
HLA-DMB-262ENST00000498020 LYL1P12980 280 aa6.76□□□□□ -1.33
HLA-DMB-262ENST00000498020 GNG4P50150 75 aa6.76□□□□□ -1.33
HLA-DMB-262ENST00000498020 TPPP2P59282 170 aa6.76□□□□□ -1.33
HLA-DMB-262ENST00000498020 KRTDAPP60985 99 aa6.76□□□□□ -1.33
HLA-DMB-262ENST00000498020 TMEM252Q8N6L7 170 aa6.76□□□□□ -1.33
HLA-DMB-262ENST00000498020 RCC2Q9P258 522 aaKnown RBP6.76□□□□□ -1.33
HLA-DMB-262ENST00000498020 NAT8BQ9UHF3 227 aa6.76□□□□□ -1.33
HLA-DMB-262ENST00000498020 ADAMTS9Q9P2N4 1935 aa6.75□□□□□ -1.33
HLA-DMB-262ENST00000498020 IGHV1-69-2A0A0G2JMI3 117 aa6.75□□□□□ -1.33
HLA-DMB-262ENST00000498020 A0A0G2JNJ9 132 aa6.75□□□□□ -1.33
HLA-DMB-262ENST00000498020 A0A1W2PNU3 283 aaPredicted RBP6.75□□□□□ -1.33
HLA-DMB-262ENST00000498020 TCAPO15273 167 aa6.75□□□□□ -1.33
HLA-DMB-262ENST00000498020 GATCO43716 136 aaKnown RBP6.75□□□□□ -1.33
HLA-DMB-262ENST00000498020 NHLH2Q02577 135 aa6.75□□□□□ -1.33
HLA-DMB-262ENST00000498020 PSG7Q13046 419 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms