RNA–Protein interactions for RNA: ENST00000497368.1

UBE3C-208, Transcript of ubiquitin protein ligase E3C, human

TSL 2

Gene UBE3C, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3C-208	ENST00000497368	SMIM30	A4D0T7	59 aa		4.17	□□□□□ -1.74
UBE3C-208	ENST00000497368	CGB1	A6NKQ9	187 aa		4.17	□□□□□ -1.74
UBE3C-208	ENST00000497368		E7EUB6	86 aa		4.17	□□□□□ -1.74
UBE3C-208	ENST00000497368	PTGES3L	E9PB15	166 aa		4.17	□□□□□ -1.74
UBE3C-208	ENST00000497368		F5H697	171 aa		4.17	□□□□□ -1.74
UBE3C-208	ENST00000497368	LINC01619	G3V211	115 aa		4.17	□□□□□ -1.74
UBE3C-208	ENST00000497368		M0QYG6	137 aa		4.17	□□□□□ -1.74
UBE3C-208	ENST00000497368	RAB29	O14966	203 aa		4.17	□□□□□ -1.74
UBE3C-208	ENST00000497368	SLC25A17	O43808	307 aa		4.17	□□□□□ -1.74
UBE3C-208	ENST00000497368	SSX5	O60225	188 aa		4.17	□□□□□ -1.74
UBE3C-208	ENST00000497368	NHLRC4	P0CG21	123 aa	Predicted RBP	4.17	□□□□□ -1.74
UBE3C-208	ENST00000497368	GSTT2	P0CG29	244 aa		4.17	□□□□□ -1.74
UBE3C-208	ENST00000497368	GSTT2B	P0CG30	244 aa		4.17	□□□□□ -1.74
UBE3C-208	ENST00000497368	OR5H8	P0DN80	308 aa		4.17	□□□□□ -1.74
UBE3C-208	ENST00000497368	IGKV1-13	P0DP09	117 aa		4.17	□□□□□ -1.74
UBE3C-208	ENST00000497368	RPL30	P62888	115 aa	Known RBP	4.17	□□□□□ -1.74
UBE3C-208	ENST00000497368	TBCE	Q15813	527 aa	Predicted RBP	4.17	□□□□□ -1.74
UBE3C-208	ENST00000497368	RAB11B	Q15907	218 aa		4.17	□□□□□ -1.74
UBE3C-208	ENST00000497368	CASC10	Q5T4H9	136 aa		4.17	□□□□□ -1.74
UBE3C-208	ENST00000497368	GLT8D1	Q68CQ7	371 aa		4.17	□□□□□ -1.74
UBE3C-208	ENST00000497368	PPP1R27	Q86WC6	154 aa		4.17	□□□□□ -1.74
UBE3C-208	ENST00000497368	PDPN	Q86YL7	162 aa		4.17	□□□□□ -1.74
UBE3C-208	ENST00000497368	POC5	Q8NA72	575 aa		4.17	□□□□□ -1.74
UBE3C-208	ENST00000497368	ADAD2	Q8NCV1	583 aa	Known RBP	4.17	□□□□□ -1.74
UBE3C-208	ENST00000497368	KCNG3	Q8TAE7	436 aa		4.17	□□□□□ -1.74
UBE3C-208	ENST00000497368	SETD6	Q8TBK2	473 aa		4.17	□□□□□ -1.74
UBE3C-208	ENST00000497368	UFD1	Q92890	307 aa		4.17	□□□□□ -1.74
UBE3C-208	ENST00000497368	FAM3D	Q96BQ1	224 aa		4.17	□□□□□ -1.74
UBE3C-208	ENST00000497368	MS4A10	Q96PG2	267 aa		4.17	□□□□□ -1.74
UBE3C-208	ENST00000497368	NEDD4L	Q96PU5	975 aa		4.17	□□□□□ -1.74
UBE3C-208	ENST00000497368	CLCC1	Q96S66	551 aa		4.17	□□□□□ -1.74
UBE3C-208	ENST00000497368	CHCHD6	Q9BRQ6	235 aa		4.17	□□□□□ -1.74
UBE3C-208	ENST00000497368	GON7	Q9BXV9	100 aa		4.17	□□□□□ -1.74
UBE3C-208	ENST00000497368	WFDC10A	Q9H1F0	79 aa		4.17	□□□□□ -1.74
UBE3C-208	ENST00000497368	OR2D2	Q9H210	308 aa		4.17	□□□□□ -1.74
UBE3C-208	ENST00000497368	NDUFB11	Q9NX14	153 aa		4.17	□□□□□ -1.74
UBE3C-208	ENST00000497368	KCNIP1	Q9NZI2	227 aa		4.17	□□□□□ -1.74
UBE3C-208	ENST00000497368	PIPOX	Q9P0Z9	390 aa		4.17	□□□□□ -1.74
UBE3C-208	ENST00000497368	METTL1	Q9UBP6	276 aa	Known RBP	4.17	□□□□□ -1.74
UBE3C-208	ENST00000497368	ZNF230	Q9UIE0	474 aa	Predicted RBP	4.17	□□□□□ -1.74
UBE3C-208	ENST00000497368	ERGIC3	Q9Y282	383 aa		4.17	□□□□□ -1.74
UBE3C-208	ENST00000497368	DNAH11	Q96DT5	4516 aa		4.17	□□□□□ -1.74
UBE3C-208	ENST00000497368		A8MZ25	164 aa		4.16	□□□□□ -1.74
UBE3C-208	ENST00000497368	TRDC	B7Z8K6	153 aa		4.16	□□□□□ -1.74
UBE3C-208	ENST00000497368	TEX22	C9J3V5	150 aa		4.16	□□□□□ -1.74
UBE3C-208	ENST00000497368		H3BUI4	141 aa		4.16	□□□□□ -1.74
UBE3C-208	ENST00000497368		M0R1X1	148 aa		4.16	□□□□□ -1.74
UBE3C-208	ENST00000497368	BMPR1B	O00238	502 aa		4.16	□□□□□ -1.74
UBE3C-208	ENST00000497368	FABP7	O15540	132 aa		4.16	□□□□□ -1.74
UBE3C-208	ENST00000497368	SAP30	O75446	220 aa		4.16	□□□□□ -1.74
UBE3C-208	ENST00000497368	RBBP9	O75884	186 aa		4.16	□□□□□ -1.74
UBE3C-208	ENST00000497368	RGS11	O94810	467 aa		4.16	□□□□□ -1.74
UBE3C-208	ENST00000497368	BRI3	O95415	125 aa		4.16	□□□□□ -1.74
UBE3C-208	ENST00000497368	PRH1	P02810	166 aa		4.16	□□□□□ -1.74
UBE3C-208	ENST00000497368	TFAP2A	P05549	437 aa		4.16	□□□□□ -1.74
UBE3C-208	ENST00000497368	CSN3	P07498	182 aa		4.16	□□□□□ -1.74
UBE3C-208	ENST00000497368	APELA	P0DMC3	54 aa		4.16	□□□□□ -1.74
UBE3C-208	ENST00000497368	IGHV4-30-4	P0DP06	118 aa		4.16	□□□□□ -1.74
UBE3C-208	ENST00000497368	MYOD1	P15172	320 aa		4.16	□□□□□ -1.74
UBE3C-208	ENST00000497368	ARSB	P15848	533 aa		4.16	□□□□□ -1.74
UBE3C-208	ENST00000497368	HIST1H1D	P16402	221 aa	Known RBP	4.16	□□□□□ -1.74
UBE3C-208	ENST00000497368	GNB3	P16520	340 aa		4.16	□□□□□ -1.74
UBE3C-208	ENST00000497368	CALR	P27797	417 aa	Known RBP	4.16	□□□□□ -1.74
UBE3C-208	ENST00000497368	DUT	P33316	252 aa	Known RBP	4.16	□□□□□ -1.74
UBE3C-208	ENST00000497368	CEACAM6	P40199	344 aa		4.16	□□□□□ -1.74
UBE3C-208	ENST00000497368	TPPP2	P59282	170 aa		4.16	□□□□□ -1.74
UBE3C-208	ENST00000497368	MED21	Q13503	144 aa		4.16	□□□□□ -1.74
UBE3C-208	ENST00000497368	KLF5	Q13887	457 aa	Predicted RBP	4.16	□□□□□ -1.74
UBE3C-208	ENST00000497368	C2orf76	Q3KRA6	126 aa		4.16	□□□□□ -1.74
UBE3C-208	ENST00000497368	AKIRIN2	Q53H80	203 aa		4.16	□□□□□ -1.74
UBE3C-208	ENST00000497368	ACTBL2	Q562R1	376 aa		4.16	□□□□□ -1.74
UBE3C-208	ENST00000497368	UNQ5815/PRO19632	Q6UWF5	114 aa		4.16	□□□□□ -1.74
UBE3C-208	ENST00000497368	ZNF562	Q6V9R5	426 aa		4.16	□□□□□ -1.74
UBE3C-208	ENST00000497368	LINC00322	Q6ZN03	302 aa	Predicted RBP	4.16	□□□□□ -1.74
UBE3C-208	ENST00000497368	IDO2	Q6ZQW0	420 aa		4.16	□□□□□ -1.74
UBE3C-208	ENST00000497368		Q6ZS49	121 aa		4.16	□□□□□ -1.74
UBE3C-208	ENST00000497368	PRSS48	Q7RTY5	328 aa		4.16	□□□□□ -1.74
UBE3C-208	ENST00000497368	ZNF429	Q86V71	674 aa		4.16	□□□□□ -1.74
UBE3C-208	ENST00000497368	C10orf67	Q8IYJ2	551 aa		4.16	□□□□□ -1.74
UBE3C-208	ENST00000497368	H1FOO	Q8IZA3	346 aa	Predicted RBP	4.16	□□□□□ -1.74
UBE3C-208	ENST00000497368	TCTEX1D1	Q8N7M0	179 aa		4.16	□□□□□ -1.74
UBE3C-208	ENST00000497368	OR4A4P	Q8NGN8	299 aa		4.16	□□□□□ -1.74
UBE3C-208	ENST00000497368	GRPEL2	Q8TAA5	225 aa		4.16	□□□□□ -1.74
UBE3C-208	ENST00000497368	MUC7	Q8TAX7	377 aa		4.16	□□□□□ -1.74
UBE3C-208	ENST00000497368	THRSP	Q92748	146 aa		4.16	□□□□□ -1.74
UBE3C-208	ENST00000497368	SLC25A38	Q96DW6	304 aa		4.16	□□□□□ -1.74
UBE3C-208	ENST00000497368	MGLL	Q99685	303 aa		4.16	□□□□□ -1.74
UBE3C-208	ENST00000497368	CHMP1A	Q9HD42	196 aa	Predicted RBP	4.16	□□□□□ -1.74
UBE3C-208	ENST00000497368	RETN	Q9HD89	108 aa		4.16	□□□□□ -1.74
UBE3C-208	ENST00000497368	RAB9B	Q9NP90	201 aa		4.16	□□□□□ -1.74
UBE3C-208	ENST00000497368	ACOT13	Q9NPJ3	140 aa		4.16	□□□□□ -1.74
UBE3C-208	ENST00000497368	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	4.16	□□□□□ -1.74
UBE3C-208	ENST00000497368	PLEKHJ1	Q9NW61	149 aa		4.16	□□□□□ -1.74
UBE3C-208	ENST00000497368	CHCHD3	Q9NX63	227 aa	Known RBP	4.16	□□□□□ -1.74
UBE3C-208	ENST00000497368	SMAD5-AS1	Q9Y6J3	95 aa		4.16	□□□□□ -1.74
UBE3C-208	ENST00000497368	PKHD1	P08F94	4074 aa		4.16	□□□□□ -1.74
UBE3C-208	ENST00000497368	PKD1	P98161	4303 aa		4.15	□□□□□ -1.74
UBE3C-208	ENST00000497368	hCG_2014768	A0A024R1R8	64 aa		4.15	□□□□□ -1.75
UBE3C-208	ENST00000497368	TRBV9	A0A0B4J1U6	114 aa		4.15	□□□□□ -1.75
UBE3C-208	ENST00000497368	LCE6A	A0A183	80 aa		4.15	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms