RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 ZNF251Q9BRH9 671 aa10.75□□□□□ -0.69
GARNL3-220ENST00000496711 NPCDR1Q9BY65 106 aa10.75□□□□□ -0.69
GARNL3-220ENST00000496711 EGLN1Q9GZT9 426 aa10.75□□□□□ -0.69
GARNL3-220ENST00000496711 SPTBN2O15020 2390 aa10.75□□□□□ -0.69
GARNL3-220ENST00000496711 TRAV38-1A0A0B4J264 116 aa10.74□□□□□ -0.69
GARNL3-220ENST00000496711 hADV38S2A0JD32 116 aa10.74□□□□□ -0.69
GARNL3-220ENST00000496711 TMPRSS2O15393 492 aa10.74□□□□□ -0.69
GARNL3-220ENST00000496711 IGKV1D-33P01593 117 aa10.74□□□□□ -0.69
GARNL3-220ENST00000496711 IGKV1-33P01594 117 aa10.74□□□□□ -0.69
GARNL3-220ENST00000496711 MBP02144 154 aa10.74□□□□□ -0.69
GARNL3-220ENST00000496711 MT-ND4LP03901 98 aa10.74□□□□□ -0.69
GARNL3-220ENST00000496711 GNG10P50151 68 aa10.74□□□□□ -0.69
GARNL3-220ENST00000496711 RAB13P51153 203 aa10.74□□□□□ -0.69
GARNL3-220ENST00000496711 RPP30P78346 268 aaKnown RBP10.74□□□□□ -0.69
GARNL3-220ENST00000496711 MRPS11P82912 194 aaKnown RBP10.74□□□□□ -0.69
GARNL3-220ENST00000496711 TLE1Q04724 770 aa10.74□□□□□ -0.69
GARNL3-220ENST00000496711 ZNF429Q86V71 674 aa10.74□□□□□ -0.69
GARNL3-220ENST00000496711 LYG1Q8N1E2 194 aa10.74□□□□□ -0.69
GARNL3-220ENST00000496711 RND1Q92730 232 aa10.74□□□□□ -0.69
GARNL3-220ENST00000496711 NIPSNAP3BQ9BS92 247 aa10.74□□□□□ -0.69
GARNL3-220ENST00000496711 SAP30LQ9HAJ7 183 aa10.74□□□□□ -0.69
GARNL3-220ENST00000496711 LINC00312Q9Y6C7 94 aa10.74□□□□□ -0.69
GARNL3-220ENST00000496711 PTPRZ1P23471 2315 aaPredicted RBP10.74□□□□□ -0.69
GARNL3-220ENST00000496711 A0A1W2PPE2 198 aa10.74□□□□□ -0.69
GARNL3-220ENST00000496711 A0A1W2PPH5 198 aa10.74□□□□□ -0.69
GARNL3-220ENST00000496711 C17orf112F2Z3M2 114 aa10.74□□□□□ -0.69
GARNL3-220ENST00000496711 TSPAN9O75954 239 aa10.74□□□□□ -0.69
GARNL3-220ENST00000496711 FAM87AP0C7U9 286 aa10.74□□□□□ -0.69
GARNL3-220ENST00000496711 NDUFB7P17568 137 aa10.74□□□□□ -0.69
GARNL3-220ENST00000496711 MDKP21741 143 aaPredicted RBP10.74□□□□□ -0.69
GARNL3-220ENST00000496711 HNF4GQ14541 408 aa10.74□□□□□ -0.69
GARNL3-220ENST00000496711 C1orf87Q8N0U7 546 aa10.74□□□□□ -0.69
GARNL3-220ENST00000496711 RPP25LQ8N5L8 163 aaKnown RBP10.74□□□□□ -0.69
GARNL3-220ENST00000496711 ZNF709Q8N972 641 aa10.74□□□□□ -0.69
GARNL3-220ENST00000496711 ISOC2Q96AB3 205 aa10.74□□□□□ -0.69
GARNL3-220ENST00000496711 RAB39BQ96DA2 213 aa10.74□□□□□ -0.69
GARNL3-220ENST00000496711 COL25A1Q9BXS0 654 aaPredicted RBP10.74□□□□□ -0.69
GARNL3-220ENST00000496711 NGBQ9NPG2 151 aa10.74□□□□□ -0.69
GARNL3-220ENST00000496711 RPUSD1Q9UJJ7 312 aaKnown RBP10.74□□□□□ -0.69
GARNL3-220ENST00000496711 LAMA5O15230 3695 aa10.73□□□□□ -0.69
GARNL3-220ENST00000496711 MAP1BP46821 2468 aaKnown RBP10.73□□□□□ -0.69
GARNL3-220ENST00000496711 PCNX1Q96RV3 2341 aa10.73□□□□□ -0.69
GARNL3-220ENST00000496711 TRAV3A0A0B4J244 114 aa10.73□□□□□ -0.69
GARNL3-220ENST00000496711 TRGV8A0A0C4DH27 118 aa10.73□□□□□ -0.69
GARNL3-220ENST00000496711 CTXND1A0A1B0GTU2 59 aa10.73□□□□□ -0.69
GARNL3-220ENST00000496711 C15orf61A6NNL5 157 aa10.73□□□□□ -0.69
GARNL3-220ENST00000496711 VSTM5A8MXK1 200 aa10.73□□□□□ -0.69
GARNL3-220ENST00000496711 VDAC2P45880 294 aaPredicted RBP10.73□□□□□ -0.69
GARNL3-220ENST00000496711 RNF212Q495C1 297 aa10.73□□□□□ -0.69
GARNL3-220ENST00000496711 FFAR4Q5NUL3 377 aa10.73□□□□□ -0.69
GARNL3-220ENST00000496711 LHX4Q969G2 390 aa10.73□□□□□ -0.69
GARNL3-220ENST00000496711 TVP23CQ96ET8 276 aa10.73□□□□□ -0.69
GARNL3-220ENST00000496711 WFIKKN1Q96NZ8 548 aa10.73□□□□□ -0.69
GARNL3-220ENST00000496711 P2RX4Q99571 388 aa10.73□□□□□ -0.69
GARNL3-220ENST00000496711 GAL3ST2Q9H3Q3 398 aa10.73□□□□□ -0.69
GARNL3-220ENST00000496711 SAV1Q9H4B6 383 aaPredicted RBP10.73□□□□□ -0.69
GARNL3-220ENST00000496711 HEYLQ9NQ87 328 aaPredicted RBP10.73□□□□□ -0.69
GARNL3-220ENST00000496711 SLC39A9Q9NUM3 307 aa10.73□□□□□ -0.69
GARNL3-220ENST00000496711 SLC25A10Q9UBX3 287 aaPredicted RBP10.73□□□□□ -0.69
GARNL3-220ENST00000496711 MSRB2Q9Y3D2 182 aa10.73□□□□□ -0.69
GARNL3-220ENST00000496711 MMP23AO75900 390 aa10.72□□□□□ -0.69
GARNL3-220ENST00000496711 IFNA10P01566 189 aa10.72□□□□□ -0.69
GARNL3-220ENST00000496711 HOXA1P49639 335 aaPredicted RBP10.72□□□□□ -0.69
GARNL3-220ENST00000496711 TMPRSS3P57727 454 aa10.72□□□□□ -0.69
GARNL3-220ENST00000496711 RAB5BP61020 215 aa10.72□□□□□ -0.69
GARNL3-220ENST00000496711 RAB11AP62491 216 aa10.72□□□□□ -0.69
GARNL3-220ENST00000496711 MEF2CQ06413 473 aaPredicted RBP10.72□□□□□ -0.69
GARNL3-220ENST00000496711 PMS2P11Q13670 270 aa10.72□□□□□ -0.69
GARNL3-220ENST00000496711 SLC25A48Q6ZT89 311 aaKnown RBP10.72□□□□□ -0.69
GARNL3-220ENST00000496711 SLC35E3Q7Z769 313 aa10.72□□□□□ -0.69
GARNL3-220ENST00000496711 ZCCHC24Q8N2G6 241 aaKnown RBP10.72□□□□□ -0.69
GARNL3-220ENST00000496711 ZNF383Q8NA42 475 aa10.72□□□□□ -0.69
GARNL3-220ENST00000496711 OR10G9Q8NGN4 311 aa10.72□□□□□ -0.69
GARNL3-220ENST00000496711 OR10G7Q8NGN6 311 aa10.72□□□□□ -0.69
GARNL3-220ENST00000496711 VKORC1Q9BQB6 163 aa10.72□□□□□ -0.69
GARNL3-220ENST00000496711 SLC25A22Q9H936 323 aa10.72□□□□□ -0.69
GARNL3-220ENST00000496711 VAX2Q9UIW0 290 aa10.72□□□□□ -0.69
GARNL3-220ENST00000496711 TCF19Q9Y242 345 aa10.72□□□□□ -0.69
GARNL3-220ENST00000496711 WDR83OSQ9Y284 106 aa10.72□□□□□ -0.69
GARNL3-220ENST00000496711 PTPRQQ9UMZ3 2332 aa10.72□□□□□ -0.69
GARNL3-220ENST00000496711 PPIAL4EA0A075B759 164 aa10.72□□□□□ -0.69
GARNL3-220ENST00000496711 A0A087WWC5 75 aa10.72□□□□□ -0.69
GARNL3-220ENST00000496711 PPIAL4DF5H284 164 aa10.72□□□□□ -0.69
GARNL3-220ENST00000496711 TMEM178BH3BS89 294 aa10.72□□□□□ -0.69
GARNL3-220ENST00000496711 PPIAL4FP0DN26 164 aa10.72□□□□□ -0.69
GARNL3-220ENST00000496711 CD1BP29016 333 aa10.72□□□□□ -0.69
GARNL3-220ENST00000496711 FAM90A2PQ658T7 463 aa10.72□□□□□ -0.69
GARNL3-220ENST00000496711 OR4A47Q6IF82 309 aa10.72□□□□□ -0.69
GARNL3-220ENST00000496711 OR10A7Q8NGE5 316 aa10.72□□□□□ -0.69
GARNL3-220ENST00000496711 CA5BP1Q8WTZ4 195 aa10.72□□□□□ -0.69
GARNL3-220ENST00000496711 RHOVQ96L33 236 aa10.72□□□□□ -0.69
GARNL3-220ENST00000496711 BIN3Q9NQY0 253 aa10.72□□□□□ -0.69
GARNL3-220ENST00000496711 PPIAL4AQ9Y536 164 aa10.72□□□□□ -0.69
GARNL3-220ENST00000496711 BSNQ9UPA5 3926 aa10.71□□□□□ -0.69
GARNL3-220ENST00000496711 C1orf196B1AJZ1 125 aa10.71□□□□□ -0.69
GARNL3-220ENST00000496711 SHISA9B4DS77 424 aa10.71□□□□□ -0.69
GARNL3-220ENST00000496711 ATXN7O15265 892 aaPredicted RBP10.71□□□□□ -0.69
GARNL3-220ENST00000496711 GFRA3O60609 400 aa10.71□□□□□ -0.69
GARNL3-220ENST00000496711 OR2C1O95371 312 aa10.71□□□□□ -0.69
GARNL3-220ENST00000496711 HRASP01112 189 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms