RNA–Protein interactions for RNA: ENST00000496468.1

TSSC4-210, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TSSC4, Length 912 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-210ENST00000496468 UBE2KP61086 200 aa14.6□□□□□ -0.07
TSSC4-210ENST00000496468 ERVK-16P61578 105 aa14.6□□□□□ -0.07
TSSC4-210ENST00000496468 PSG5Q15238 335 aa14.6□□□□□ -0.07
TSSC4-210ENST00000496468 C5orf64Q2M2E5 130 aa14.6□□□□□ -0.07
TSSC4-210ENST00000496468 TMEM128Q5BJH2 165 aa14.6□□□□□ -0.07
TSSC4-210ENST00000496468 NRARPQ7Z6K4 114 aa14.6□□□□□ -0.07
TSSC4-210ENST00000496468 SLC25A42Q86VD7 318 aa14.6□□□□□ -0.07
TSSC4-210ENST00000496468 RASL11BQ9BPW5 248 aa14.6□□□□□ -0.07
TSSC4-210ENST00000496468 FBXL15Q9H469 300 aa14.6□□□□□ -0.07
TSSC4-210ENST00000496468 RANBP3Q9H6Z4 567 aaPredicted RBP14.6□□□□□ -0.07
TSSC4-210ENST00000496468 METTL1Q9UBP6 276 aaKnown RBP14.6□□□□□ -0.07
TSSC4-210ENST00000496468 PTTG1O95997 202 aa14.59□□□□□ -0.07
TSSC4-210ENST00000496468 RPA2P15927 270 aa14.59□□□□□ -0.07
TSSC4-210ENST00000496468 NQO2P16083 231 aa14.59□□□□□ -0.07
TSSC4-210ENST00000496468 ANXA7P20073 488 aaKnown RBP14.59□□□□□ -0.07
TSSC4-210ENST00000496468 UCP1P25874 307 aa14.59□□□□□ -0.07
TSSC4-210ENST00000496468 PPP1R1AQ13522 171 aa14.59□□□□□ -0.07
TSSC4-210ENST00000496468 SP6Q3SY56 376 aa14.59□□□□□ -0.07
TSSC4-210ENST00000496468 ZNF585BQ52M93 769 aa14.59□□□□□ -0.07
TSSC4-210ENST00000496468 VSTM2AQ8TAG5 236 aa14.59□□□□□ -0.07
TSSC4-210ENST00000496468 R3HDM4Q96D70 268 aa14.59□□□□□ -0.07
TSSC4-210ENST00000496468 GALNT14Q96FL9 552 aa14.59□□□□□ -0.07
TSSC4-210ENST00000496468 AIFM2Q9BRQ8 373 aa14.59□□□□□ -0.07
TSSC4-210ENST00000496468 TMEM222Q9H0R3 208 aa14.59□□□□□ -0.07
TSSC4-210ENST00000496468 KCNIP3Q9Y2W7 256 aa14.59□□□□□ -0.07
TSSC4-210ENST00000496468 SH2D7A6NKC9 451 aaPredicted RBP14.58□□□□□ -0.08
TSSC4-210ENST00000496468 MARCH11A6NNE9 402 aa14.58□□□□□ -0.08
TSSC4-210ENST00000496468 SRRM4A7MD48 611 aaKnown RBP14.58□□□□□ -0.08
TSSC4-210ENST00000496468 AMY1AP04745 511 aa14.58□□□□□ -0.08
TSSC4-210ENST00000496468 SUPT4H1P63272 117 aaKnown RBP14.58□□□□□ -0.08
TSSC4-210ENST00000496468 DHODHQ02127 395 aa14.58□□□□□ -0.08
TSSC4-210ENST00000496468 C9orf152Q5JTZ5 239 aa14.58□□□□□ -0.08
TSSC4-210ENST00000496468 PLET1Q6UQ28 207 aa14.58□□□□□ -0.08
TSSC4-210ENST00000496468 SSX9Q7RTT3 188 aa14.58□□□□□ -0.08
TSSC4-210ENST00000496468 VKORC1L1Q8N0U8 176 aa14.58□□□□□ -0.08
TSSC4-210ENST00000496468 DMBX1Q8NFW5 382 aa14.58□□□□□ -0.08
TSSC4-210ENST00000496468 RHOVQ96L33 236 aa14.58□□□□□ -0.08
TSSC4-210ENST00000496468 TPSG1Q9NRR2 321 aa14.58□□□□□ -0.08
TSSC4-210ENST00000496468 CREBL2O60519 120 aaPredicted RBP14.57□□□□□ -0.08
TSSC4-210ENST00000496468 HLA-AP01891 365 aaKnown RBP14.57□□□□□ -0.08
TSSC4-210ENST00000496468 H2AFB2P0C5Z0 115 aa14.57□□□□□ -0.08
TSSC4-210ENST00000496468 SRPXP78539 464 aa14.57□□□□□ -0.08
TSSC4-210ENST00000496468 POU2AF1Q16633 256 aa14.57□□□□□ -0.08
TSSC4-210ENST00000496468 C4orf46Q504U0 113 aa14.57□□□□□ -0.08
TSSC4-210ENST00000496468 ARSJQ5FYB0 599 aaPredicted RBP14.57□□□□□ -0.08
TSSC4-210ENST00000496468 DUSP18Q8NEJ0 188 aa14.57□□□□□ -0.08
TSSC4-210ENST00000496468 PRSS22Q9GZN4 317 aa14.57□□□□□ -0.08
TSSC4-210ENST00000496468 ZNF702PQ9H963 129 aa14.57□□□□□ -0.08
TSSC4-210ENST00000496468 BEX1Q9HBH7 125 aa14.57□□□□□ -0.08
TSSC4-210ENST00000496468 SIGLEC9Q9Y336 463 aa14.57□□□□□ -0.08
TSSC4-210ENST00000496468 ATG12O94817 140 aa14.56□□□□□ -0.08
TSSC4-210ENST00000496468 KBTBD11O94819 623 aa14.56□□□□□ -0.08
TSSC4-210ENST00000496468 SFT2D2O95562 160 aa14.56□□□□□ -0.08
TSSC4-210ENST00000496468 IGKV1-39P01597 117 aa14.56□□□□□ -0.08
TSSC4-210ENST00000496468 HLA-DRB1P01911 266 aa14.56□□□□□ -0.08
TSSC4-210ENST00000496468 IGKV1D-39P04432 117 aa14.56□□□□□ -0.08
TSSC4-210ENST00000496468 OR4E1P0C645 316 aa14.56□□□□□ -0.08
TSSC4-210ENST00000496468 G6PCP35575 357 aa14.56□□□□□ -0.08
TSSC4-210ENST00000496468 AKR1C2P52895 323 aa14.56□□□□□ -0.08
TSSC4-210ENST00000496468 RAG2P55895 527 aa14.56□□□□□ -0.08
TSSC4-210ENST00000496468 RIPPLY3P57055 190 aa14.56□□□□□ -0.08
TSSC4-210ENST00000496468 RAB25P57735 213 aa14.56□□□□□ -0.08
TSSC4-210ENST00000496468 BLCAPP62952 87 aa14.56□□□□□ -0.08
TSSC4-210ENST00000496468 TMEM187Q14656 261 aa14.56□□□□□ -0.08
TSSC4-210ENST00000496468 OR4A47Q6IF82 309 aa14.56□□□□□ -0.08
TSSC4-210ENST00000496468 Q6ZSV7 163 aa14.56□□□□□ -0.08
TSSC4-210ENST00000496468 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.56□□□□□ -0.08
TSSC4-210ENST00000496468 TEX45Q8NA69 505 aa14.56□□□□□ -0.08
TSSC4-210ENST00000496468 RNASE11Q8TAA1 199 aaKnown RBP14.56□□□□□ -0.08
TSSC4-210ENST00000496468 CASTOR1Q8WTX7 329 aa14.56□□□□□ -0.08
TSSC4-210ENST00000496468 GLYATL2Q8WU03 294 aa14.56□□□□□ -0.08
TSSC4-210ENST00000496468 TMEM140Q9NV12 185 aa14.56□□□□□ -0.08
TSSC4-210ENST00000496468 JMJD1CQ15652 2540 aa14.56□□□□□ -0.08
TSSC4-210ENST00000496468 OR2A4O95047 310 aa14.55□□□□□ -0.08
TSSC4-210ENST00000496468 NDUFA7O95182 113 aa14.55□□□□□ -0.08
TSSC4-210ENST00000496468 CA2P00918 260 aa14.55□□□□□ -0.08
TSSC4-210ENST00000496468 KRASP01116 189 aa14.55□□□□□ -0.08
TSSC4-210ENST00000496468 CRYGBP07316 175 aa14.55□□□□□ -0.08
TSSC4-210ENST00000496468 RELBQ01201 579 aa14.55□□□□□ -0.08
TSSC4-210ENST00000496468 DHRS2Q13268 280 aa14.55□□□□□ -0.08
TSSC4-210ENST00000496468 RGS21Q2M5E4 152 aa14.55□□□□□ -0.08
TSSC4-210ENST00000496468 TMEM268Q5VZI3 342 aa14.55□□□□□ -0.08
TSSC4-210ENST00000496468 PPP1R27Q86WC6 154 aa14.55□□□□□ -0.08
TSSC4-210ENST00000496468 ZNF695Q8IW36 515 aa14.55□□□□□ -0.08
TSSC4-210ENST00000496468 PUSL1Q8N0Z8 303 aaKnown RBP14.55□□□□□ -0.08
TSSC4-210ENST00000496468 LHFPL5Q8TAF8 219 aa14.55□□□□□ -0.08
TSSC4-210ENST00000496468 TAF15Q92804 592 aaKnown RBP eCLIP14.55□□□□□ -0.08
TSSC4-210ENST00000496468 RBPMSQ93062 196 aaKnown RBP14.55□□□□□ -0.08
TSSC4-210ENST00000496468 OR2A7Q96R45 310 aa14.55□□□□□ -0.08
TSSC4-210ENST00000496468 CLCC1Q96S66 551 aa14.55□□□□□ -0.08
TSSC4-210ENST00000496468 BET1LQ9NYM9 111 aa14.55□□□□□ -0.08
TSSC4-210ENST00000496468 PRR13Q9NZ81 148 aa14.55□□□□□ -0.08
TSSC4-210ENST00000496468 SETD2Q9BYW2 2564 aaPredicted RBP14.54□□□□□ -0.08
TSSC4-210ENST00000496468 KCNAB3O43448 404 aa14.54□□□□□ -0.08
TSSC4-210ENST00000496468 TSPAN9O75954 239 aa14.54□□□□□ -0.08
TSSC4-210ENST00000496468 CDS2O95674 445 aa14.54□□□□□ -0.08
TSSC4-210ENST00000496468 MECP2P51608 486 aaKnown RBP14.54□□□□□ -0.08
TSSC4-210ENST00000496468 LIN54Q6MZP7 749 aa14.54□□□□□ -0.08
TSSC4-210ENST00000496468 SLC35E3Q7Z769 313 aa14.54□□□□□ -0.08
TSSC4-210ENST00000496468 LYG2Q86SG7 212 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms