RNA–Protein interactions for RNA: ENST00000496323.1

SPTBN1-205, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 2,225 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-205ENST00000496323 PATZ1Q9HBE1 687 aaKnown RBP11.13□□□□□ -0.63
SPTBN1-205ENST00000496323 A8MXK9 166 aa11.12□□□□□ -0.63
SPTBN1-205ENST00000496323 H0YJW9 148 aa11.12□□□□□ -0.63
SPTBN1-205ENST00000496323 OVOL3O00110 214 aa11.12□□□□□ -0.63
SPTBN1-205ENST00000496323 IL6RP08887 468 aaPredicted RBP11.12□□□□□ -0.63
SPTBN1-205ENST00000496323 ATP6V0CP27449 155 aa11.12□□□□□ -0.63
SPTBN1-205ENST00000496323 EFNA4P52798 201 aa11.12□□□□□ -0.63
SPTBN1-205ENST00000496323 PDLIM3Q53GG5 364 aaPredicted RBP11.12□□□□□ -0.63
SPTBN1-205ENST00000496323 HSD17B13Q7Z5P4 300 aaPredicted RBP11.12□□□□□ -0.63
SPTBN1-205ENST00000496323 STPG2Q8N412 459 aa11.12□□□□□ -0.63
SPTBN1-205ENST00000496323 EIF4E3Q8N5X7 224 aaKnown RBP11.12□□□□□ -0.63
SPTBN1-205ENST00000496323 OR13D1Q8NGV5 346 aa11.12□□□□□ -0.63
SPTBN1-205ENST00000496323 OR4A16Q8NH70 328 aa11.12□□□□□ -0.63
SPTBN1-205ENST00000496323 TMEM186Q96B77 213 aa11.12□□□□□ -0.63
SPTBN1-205ENST00000496323 IGHV2-26A0A0B4J1V2 119 aa11.12□□□□□ -0.63
SPTBN1-205ENST00000496323 RTL8BQ17RB0 113 aa11.12□□□□□ -0.63
SPTBN1-205ENST00000496323 PXDC1Q5TGL8 231 aa11.12□□□□□ -0.63
SPTBN1-205ENST00000496323 FAM71F2Q6NXP2 309 aa11.12□□□□□ -0.63
SPTBN1-205ENST00000496323 OR52E5Q8NH55 327 aa11.12□□□□□ -0.63
SPTBN1-205ENST00000496323 SAT2Q96F10 170 aaPredicted RBP11.12□□□□□ -0.63
SPTBN1-205ENST00000496323 NABP2Q9BQ15 211 aa11.12□□□□□ -0.63
SPTBN1-205ENST00000496323 FLNCQ14315 2725 aa11.11□□□□□ -0.63
SPTBN1-205ENST00000496323 PMS2P5A8MQ11 134 aa11.11□□□□□ -0.63
SPTBN1-205ENST00000496323 CEBPZOSA8MTT3 80 aa11.11□□□□□ -0.63
SPTBN1-205ENST00000496323 IFNA17P01571 189 aa11.11□□□□□ -0.63
SPTBN1-205ENST00000496323 IGLV1-47P01700 117 aa11.11□□□□□ -0.63
SPTBN1-205ENST00000496323 RBP4P02753 201 aa11.11□□□□□ -0.63
SPTBN1-205ENST00000496323 SPCS3P61009 180 aa11.11□□□□□ -0.63
SPTBN1-205ENST00000496323 GNB2P62879 340 aa11.11□□□□□ -0.63
SPTBN1-205ENST00000496323 ZNF429Q86V71 674 aa11.11□□□□□ -0.63
SPTBN1-205ENST00000496323 ZNF525Q8N782 197 aa11.11□□□□□ -0.63
SPTBN1-205ENST00000496323 IGFBPL1Q8WX77 278 aa11.11□□□□□ -0.63
SPTBN1-205ENST00000496323 A0A1W2PPH5 198 aa11.11□□□□□ -0.63
SPTBN1-205ENST00000496323 C15orf61A6NNL5 157 aa11.11□□□□□ -0.63
SPTBN1-205ENST00000496323 HRASP01112 189 aa11.11□□□□□ -0.63
SPTBN1-205ENST00000496323 GPR6P46095 362 aaPredicted RBP11.11□□□□□ -0.63
SPTBN1-205ENST00000496323 FHITP49789 147 aa11.11□□□□□ -0.63
SPTBN1-205ENST00000496323 RUNX1Q01196 453 aa11.11□□□□□ -0.63
SPTBN1-205ENST00000496323 TAGLNQ01995 201 aaKnown RBP11.11□□□□□ -0.63
SPTBN1-205ENST00000496323 MALRD1Q5VYJ5 2156 aa11.11□□□□□ -0.63
SPTBN1-205ENST00000496323 DHRS7BQ6IAN0 325 aaPredicted RBP11.11□□□□□ -0.63
SPTBN1-205ENST00000496323 Q8N7P7 452 aa11.11□□□□□ -0.63
SPTBN1-205ENST00000496323 CIB3Q96Q77 187 aaPredicted RBP11.11□□□□□ -0.63
SPTBN1-205ENST00000496323 SSBP3Q9BWW4 388 aaPredicted RBP11.11□□□□□ -0.63
SPTBN1-205ENST00000496323 TMEM14BQ9NUH8 114 aa11.11□□□□□ -0.63
SPTBN1-205ENST00000496323 DFFBO76075 338 aa11.1□□□□□ -0.63
SPTBN1-205ENST00000496323 LIPFP07098 398 aa11.1□□□□□ -0.63
SPTBN1-205ENST00000496323 VDAC2P45880 294 aaPredicted RBP11.1□□□□□ -0.63
SPTBN1-205ENST00000496323 MARC2Q969Z3 335 aa11.1□□□□□ -0.63
SPTBN1-205ENST00000496323 MARVELD3Q96A59 401 aa11.1□□□□□ -0.63
SPTBN1-205ENST00000496323 CACFD1Q9UGQ2 172 aa11.1□□□□□ -0.63
SPTBN1-205ENST00000496323 FOXA2Q9Y261 457 aaPredicted RBP11.1□□□□□ -0.63
SPTBN1-205ENST00000496323 STRAPQ9Y3F4 350 aaKnown RBP11.1□□□□□ -0.63
SPTBN1-205ENST00000496323 MYOD1P15172 320 aa11.09□□□□□ -0.63
SPTBN1-205ENST00000496323 RPS16P62249 146 aaKnown RBP11.09□□□□□ -0.63
SPTBN1-205ENST00000496323 HBG1P69891 147 aa11.09□□□□□ -0.63
SPTBN1-205ENST00000496323 HBG2P69892 147 aa11.09□□□□□ -0.63
SPTBN1-205ENST00000496323 HLA-DRB5Q30154 266 aa11.09□□□□□ -0.63
SPTBN1-205ENST00000496323 OR8G2PQ6IF36 304 aa11.09□□□□□ -0.63
SPTBN1-205ENST00000496323 TNFRSF14Q92956 283 aa11.09□□□□□ -0.63
SPTBN1-205ENST00000496323 TSNAXQ99598 290 aaKnown RBP11.09□□□□□ -0.63
SPTBN1-205ENST00000496323 HRH4Q9H3N8 390 aa11.09□□□□□ -0.63
SPTBN1-205ENST00000496323 ONECUT1Q9UBC0 465 aa11.09□□□□□ -0.63
SPTBN1-205ENST00000496323 DOPEY1Q5JWR5 2465 aa11.09□□□□□ -0.63
SPTBN1-205ENST00000496323 YLPM1P49750 1951 aaKnown RBP11.09□□□□□ -0.63
SPTBN1-205ENST00000496323 USP9XQ93008 2570 aaPredicted RBP11.09□□□□□ -0.63
SPTBN1-205ENST00000496323 C15orf62A8K5M9 175 aa11.09□□□□□ -0.63
SPTBN1-205ENST00000496323 H7C2Y5 167 aa11.09□□□□□ -0.63
SPTBN1-205ENST00000496323 APOA2P02652 100 aa11.09□□□□□ -0.63
SPTBN1-205ENST00000496323 ARG1P05089 322 aa11.09□□□□□ -0.63
SPTBN1-205ENST00000496323 TMEM177Q53S58 311 aa11.09□□□□□ -0.63
SPTBN1-205ENST00000496323 BTNL8Q6UX41 500 aa11.09□□□□□ -0.63
SPTBN1-205ENST00000496323 TMEM182Q6ZP80 229 aaPredicted RBP11.09□□□□□ -0.63
SPTBN1-205ENST00000496323 Q6ZRG5 221 aa11.09□□□□□ -0.63
SPTBN1-205ENST00000496323 TGIF2LXQ8IUE1 241 aa11.09□□□□□ -0.63
SPTBN1-205ENST00000496323 OR2G3Q8NGZ4 309 aa11.09□□□□□ -0.63
SPTBN1-205ENST00000496323 LINC00052Q96N35 136 aa11.09□□□□□ -0.63
SPTBN1-205ENST00000496323 CLEC7AQ9BXN2 247 aa11.09□□□□□ -0.63
SPTBN1-205ENST00000496323 PARP11Q9NR21 331 aa11.09□□□□□ -0.63
SPTBN1-205ENST00000496323 TCF19Q9Y242 345 aa11.09□□□□□ -0.63
SPTBN1-205ENST00000496323 KLF2Q9Y5W3 355 aaPredicted RBP11.09□□□□□ -0.63
SPTBN1-205ENST00000496323 LOC105371242A0A075B767 164 aa11.08□□□□□ -0.64
SPTBN1-205ENST00000496323 UPK2O00526 184 aa11.08□□□□□ -0.64
SPTBN1-205ENST00000496323 SHOXO15266 292 aa11.08□□□□□ -0.64
SPTBN1-205ENST00000496323 COX7A1P24310 79 aa11.08□□□□□ -0.64
SPTBN1-205ENST00000496323 TLE4Q04727 773 aa11.08□□□□□ -0.64
SPTBN1-205ENST00000496323 SRSF1Q07955 248 aaKnown RBP eCLIP11.08□□□□□ -0.64
SPTBN1-205ENST00000496323 SLC38A11Q08AI6 406 aa11.08□□□□□ -0.64
SPTBN1-205ENST00000496323 LYPD6BQ8NI32 183 aa11.08□□□□□ -0.64
SPTBN1-205ENST00000496323 OSR1Q8TAX0 266 aaPredicted RBP11.08□□□□□ -0.64
SPTBN1-205ENST00000496323 MMP26Q9NRE1 261 aa11.08□□□□□ -0.64
SPTBN1-205ENST00000496323 NUP50Q9UKX7 468 aa11.08□□□□□ -0.64
SPTBN1-205ENST00000496323 ZNF462Q96JM2 2506 aa11.08□□□□□ -0.64
SPTBN1-205ENST00000496323 EPG5Q9HCE0 2579 aa11.08□□□□□ -0.64
SPTBN1-205ENST00000496323 BUB1B-PAK6H3BSN5 160 aa11.08□□□□□ -0.64
SPTBN1-205ENST00000496323 GOSR1O95249 250 aa11.08□□□□□ -0.64
SPTBN1-205ENST00000496323 IFNA5P01569 189 aa11.08□□□□□ -0.64
SPTBN1-205ENST00000496323 SAA1P0DJI8 122 aaPredicted RBP11.08□□□□□ -0.64
SPTBN1-205ENST00000496323 ZFP36P26651 326 aaKnown RBP11.08□□□□□ -0.64
SPTBN1-205ENST00000496323 PRRX1P54821 245 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms