RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 PIRO00625 290 aa2.1□□□□□ -2.07
CLK1-214ENST00000496205 CRYZL1O95825 349 aa2.1□□□□□ -2.07
CLK1-214ENST00000496205 HMGN1P05114 100 aa2.1□□□□□ -2.07
CLK1-214ENST00000496205 C8GP07360 202 aa2.1□□□□□ -2.07
CLK1-214ENST00000496205 PFN1P07737 140 aaKnown RBP2.1□□□□□ -2.07
CLK1-214ENST00000496205 RBP1P09455 135 aa2.1□□□□□ -2.07
CLK1-214ENST00000496205 ZNF286BP0CG31 522 aa2.1□□□□□ -2.07
CLK1-214ENST00000496205 CD28P10747 220 aa2.1□□□□□ -2.07
CLK1-214ENST00000496205 SCGB1A1P11684 91 aa2.1□□□□□ -2.07
CLK1-214ENST00000496205 S100A2P29034 98 aa2.1□□□□□ -2.07
CLK1-214ENST00000496205 TNFAIP6P98066 277 aaPredicted RBP2.1□□□□□ -2.07
CLK1-214ENST00000496205 RUNX1Q01196 453 aa2.1□□□□□ -2.07
CLK1-214ENST00000496205 PDGFRLQ15198 375 aa2.1□□□□□ -2.07
CLK1-214ENST00000496205 GRK1Q15835 563 aa2.1□□□□□ -2.07
CLK1-214ENST00000496205 KRTAP21-2Q3LI59 83 aa2.1□□□□□ -2.07
CLK1-214ENST00000496205 IBA57Q5T440 356 aaKnown RBP2.1□□□□□ -2.07
CLK1-214ENST00000496205 ZFAND6Q6FIF0 208 aa2.1□□□□□ -2.07
CLK1-214ENST00000496205 SCXQ7RTU7 201 aa2.1□□□□□ -2.07
CLK1-214ENST00000496205 DAZ4Q86SG3 579 aaKnown RBP2.1□□□□□ -2.07
CLK1-214ENST00000496205 OSR2Q8N2R0 312 aa2.1□□□□□ -2.07
CLK1-214ENST00000496205 ANKRD29Q8N6D5 301 aa2.1□□□□□ -2.07
CLK1-214ENST00000496205 APCDD1LQ8NCL9 501 aa2.1□□□□□ -2.07
CLK1-214ENST00000496205 TMEM35BQ8NCS4 154 aa2.1□□□□□ -2.07
CLK1-214ENST00000496205 OR4A5Q8NH83 315 aa2.1□□□□□ -2.07
CLK1-214ENST00000496205 SKA2Q8WVK7 121 aaPredicted RBP2.1□□□□□ -2.07
CLK1-214ENST00000496205 MAL2Q969L2 176 aa2.1□□□□□ -2.07
CLK1-214ENST00000496205 GPER1Q99527 375 aa2.1□□□□□ -2.07
CLK1-214ENST00000496205 TMEM147Q9BVK8 224 aa2.1□□□□□ -2.07
CLK1-214ENST00000496205 ABCG5Q9H222 651 aa2.1□□□□□ -2.07
CLK1-214ENST00000496205 DAZ1Q9NQZ3 744 aaKnown RBP2.1□□□□□ -2.07
CLK1-214ENST00000496205 CMTM6Q9NX76 183 aa2.1□□□□□ -2.07
CLK1-214ENST00000496205 RPUSD1Q9UJJ7 312 aaKnown RBP2.1□□□□□ -2.07
CLK1-214ENST00000496205 KLK5Q9Y337 293 aaPredicted RBP2.1□□□□□ -2.07
CLK1-214ENST00000496205 NDUFAF1Q9Y375 327 aa2.1□□□□□ -2.07
CLK1-214ENST00000496205 HSPB11Q9Y547 144 aa2.1□□□□□ -2.07
CLK1-214ENST00000496205 TMEM56-RWDD3S4R434 201 aa2.1□□□□□ -2.07
CLK1-214ENST00000496205 DICER1Q9UPY3 1922 aaKnown RBP2.1□□□□□ -2.07
CLK1-214ENST00000496205 BAZ2AQ9UIF9 1905 aaKnown RBP2.09□□□□□ -2.07
CLK1-214ENST00000496205 FAM236DA0A1B0GTK5 79 aa2.09□□□□□ -2.07
CLK1-214ENST00000496205 TRAPPC13A5PLN9 417 aa2.09□□□□□ -2.07
CLK1-214ENST00000496205 COX7A2LO14548 114 aa2.09□□□□□ -2.07
CLK1-214ENST00000496205 C1QBP02746 253 aa2.09□□□□□ -2.07
CLK1-214ENST00000496205 IL4P05112 153 aa2.09□□□□□ -2.07
CLK1-214ENST00000496205 FAM236CP0DP71 79 aa2.09□□□□□ -2.07
CLK1-214ENST00000496205 SPI1P17947 270 aa2.09□□□□□ -2.07
CLK1-214ENST00000496205 PPIBP23284 216 aaKnown RBP2.09□□□□□ -2.07
CLK1-214ENST00000496205 NPY1RP25929 384 aa2.09□□□□□ -2.07
CLK1-214ENST00000496205 ERP29P30040 261 aaKnown RBP2.09□□□□□ -2.07
CLK1-214ENST00000496205 PHBP35232 272 aa2.09□□□□□ -2.07
CLK1-214ENST00000496205 TGFBR1P36897 503 aa2.09□□□□□ -2.07
CLK1-214ENST00000496205 DAPP51397 102 aa2.09□□□□□ -2.07
CLK1-214ENST00000496205 ZNF140P52738 457 aaPredicted RBP2.09□□□□□ -2.07
CLK1-214ENST00000496205 KRTAP10-10P60014 251 aa2.09□□□□□ -2.07
CLK1-214ENST00000496205 ZNF816Q0VGE8 651 aaPredicted RBP2.09□□□□□ -2.07
CLK1-214ENST00000496205 ZNF880Q6PDB4 577 aa2.09□□□□□ -2.07
CLK1-214ENST00000496205 TOMM20LQ6UXN7 152 aa2.09□□□□□ -2.07
CLK1-214ENST00000496205 UNQ9165/PRO28630Q6UXU0 137 aa2.09□□□□□ -2.07
CLK1-214ENST00000496205 Q6ZS49 121 aa2.09□□□□□ -2.07
CLK1-214ENST00000496205 TMPPEQ6ZT21 453 aa2.09□□□□□ -2.07
CLK1-214ENST00000496205 SGPP2Q8IWX5 399 aa2.09□□□□□ -2.07
CLK1-214ENST00000496205 C1orf174Q8IYL3 243 aa2.09□□□□□ -2.07
CLK1-214ENST00000496205 UMODL1-AS1Q8N2C9 162 aa2.09□□□□□ -2.07
CLK1-214ENST00000496205 SLC35F6Q8N357 371 aa2.09□□□□□ -2.07
CLK1-214ENST00000496205 SMIM20Q8N5G0 67 aa2.09□□□□□ -2.07
CLK1-214ENST00000496205 ZNF615Q8N8J6 731 aa2.09□□□□□ -2.07
CLK1-214ENST00000496205 ZFP62Q8NB50 900 aaPredicted RBP2.09□□□□□ -2.07
CLK1-214ENST00000496205 BPIFB6Q8NFQ5 453 aa2.09□□□□□ -2.07
CLK1-214ENST00000496205 C12orf43Q96C57 262 aaKnown RBP2.09□□□□□ -2.07
CLK1-214ENST00000496205 LINC00477Q96M19 166 aa2.09□□□□□ -2.07
CLK1-214ENST00000496205 NMNAT3Q96T66 252 aa2.09□□□□□ -2.07
CLK1-214ENST00000496205 AIF1LQ9BQI0 150 aa2.09□□□□□ -2.07
CLK1-214ENST00000496205 CCDC90BQ9GZT6 254 aa2.09□□□□□ -2.07
CLK1-214ENST00000496205 GABARAPL1Q9H0R8 117 aa2.09□□□□□ -2.07
CLK1-214ENST00000496205 OR2D2Q9H210 308 aa2.09□□□□□ -2.07
CLK1-214ENST00000496205 SPANXCQ9NY87 97 aa2.09□□□□□ -2.07
CLK1-214ENST00000496205 UTP11Q9Y3A2 253 aaKnown RBP2.09□□□□□ -2.07
CLK1-214ENST00000496205 ITGB4P16144 1822 aa2.09□□□□□ -2.08
CLK1-214ENST00000496205 KIAA1671Q9BY89 1806 aa2.09□□□□□ -2.08
CLK1-214ENST00000496205 ZCCHC11Q5TAX3 1644 aaKnown RBP2.09□□□□□ -2.08
CLK1-214ENST00000496205 NID2Q14112 1375 aa2.09□□□□□ -2.08
CLK1-214ENST00000496205 TRBV24-1A0A075B6N3 115 aa2.08□□□□□ -2.08
CLK1-214ENST00000496205 IGKV2-28A0A075B6P5 120 aa2.08□□□□□ -2.08
CLK1-214ENST00000496205 G3V2T6 193 aa2.08□□□□□ -2.08
CLK1-214ENST00000496205 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.08□□□□□ -2.08
CLK1-214ENST00000496205 J3QRK9 145 aa2.08□□□□□ -2.08
CLK1-214ENST00000496205 ORC5O43913 435 aa2.08□□□□□ -2.08
CLK1-214ENST00000496205 NDUFB2O95178 105 aa2.08□□□□□ -2.08
CLK1-214ENST00000496205 NDUFC2O95298 119 aa2.08□□□□□ -2.08
CLK1-214ENST00000496205 IGKV2D-28P01615 120 aa2.08□□□□□ -2.08
CLK1-214ENST00000496205 IGLV7-43P04211 117 aa2.08□□□□□ -2.08
CLK1-214ENST00000496205 IGHV3-30-3P0DP02 117 aa2.08□□□□□ -2.08
CLK1-214ENST00000496205 PPP1CCP36873 323 aaKnown RBP2.08□□□□□ -2.08
CLK1-214ENST00000496205 TBPL1P62380 186 aa2.08□□□□□ -2.08
CLK1-214ENST00000496205 RHOBP62745 196 aa2.08□□□□□ -2.08
CLK1-214ENST00000496205 FUT5Q11128 374 aa2.08□□□□□ -2.08
CLK1-214ENST00000496205 CST6Q15828 149 aa2.08□□□□□ -2.08
CLK1-214ENST00000496205 KCNJ8Q15842 424 aa2.08□□□□□ -2.08
CLK1-214ENST00000496205 LY6EQ16553 131 aa2.08□□□□□ -2.08
CLK1-214ENST00000496205 C12orf74Q32Q52 190 aa2.08□□□□□ -2.08
CLK1-214ENST00000496205 SCGB2B2Q4G0G5 96 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms