RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 C22orf34Q6ZV56 151 aa9.15□□□□□ -0.94
CMSS1-208ENST00000496116 ADTRPQ96IZ2 230 aa9.15□□□□□ -0.94
CMSS1-208ENST00000496116 YPEL4Q96NS1 127 aa9.15□□□□□ -0.94
CMSS1-208ENST00000496116 GAFA1Q96PS6 74 aa9.15□□□□□ -0.94
CMSS1-208ENST00000496116 SLC25A22Q9H936 323 aa9.15□□□□□ -0.94
CMSS1-208ENST00000496116 HEYLQ9NQ87 328 aaPredicted RBP9.15□□□□□ -0.94
CMSS1-208ENST00000496116 MANBALQ9NQG1 85 aa9.15□□□□□ -0.94
CMSS1-208ENST00000496116 TMEM140Q9NV12 185 aa9.15□□□□□ -0.94
CMSS1-208ENST00000496116 Q9UFV3 132 aa9.15□□□□□ -0.94
CMSS1-208ENST00000496116 TANC2Q9HCD6 1990 aa9.15□□□□□ -0.94
CMSS1-208ENST00000496116 DSCAML1Q8TD84 2053 aa9.15□□□□□ -0.95
CMSS1-208ENST00000496116 C5orf52A6NGY3 159 aa9.14□□□□□ -0.95
CMSS1-208ENST00000496116 ZNF727A8MUV8 499 aa9.14□□□□□ -0.95
CMSS1-208ENST00000496116 SLC31A2O15432 143 aa9.14□□□□□ -0.95
CMSS1-208ENST00000496116 MPDU1O75352 247 aa9.14□□□□□ -0.95
CMSS1-208ENST00000496116 MDKP21741 143 aaPredicted RBP9.14□□□□□ -0.95
CMSS1-208ENST00000496116 TDGF1P3P51864 188 aa9.14□□□□□ -0.95
CMSS1-208ENST00000496116 RPS16P62249 146 aaKnown RBP9.14□□□□□ -0.95
CMSS1-208ENST00000496116 RELBQ01201 579 aa9.14□□□□□ -0.95
CMSS1-208ENST00000496116 MEF2BQ02080 365 aaPredicted RBP9.14□□□□□ -0.95
CMSS1-208ENST00000496116 CT45A1Q5HYN5 189 aa9.14□□□□□ -0.95
CMSS1-208ENST00000496116 TEX36Q5VZQ5 186 aa9.14□□□□□ -0.95
CMSS1-208ENST00000496116 ZNF788Q6ZQV5 615 aa9.14□□□□□ -0.95
CMSS1-208ENST00000496116 DEFB108BQ8NET1 73 aa9.14□□□□□ -0.95
CMSS1-208ENST00000496116 CT45A3Q8NHU0 189 aa9.14□□□□□ -0.95
CMSS1-208ENST00000496116 DDB2Q92466 427 aa9.14□□□□□ -0.95
CMSS1-208ENST00000496116 GGACTQ9BVM4 153 aa9.14□□□□□ -0.95
CMSS1-208ENST00000496116 IDI2-AS1Q9NZ38 188 aa9.14□□□□□ -0.95
CMSS1-208ENST00000496116 TP53TG5Q9Y2B4 290 aa9.14□□□□□ -0.95
CMSS1-208ENST00000496116 RIF1Q5UIP0 2472 aaKnown RBP9.14□□□□□ -0.95
CMSS1-208ENST00000496116 SAA2-SAA4A0A096LPE2 208 aa9.14□□□□□ -0.95
CMSS1-208ENST00000496116 GYPAP02724 150 aa9.14□□□□□ -0.95
CMSS1-208ENST00000496116 SAA2P0DJI9 122 aaPredicted RBP9.14□□□□□ -0.95
CMSS1-208ENST00000496116 ELOBQ15370 118 aa9.14□□□□□ -0.95
CMSS1-208ENST00000496116 WFDC8Q8IUA0 241 aa9.14□□□□□ -0.95
CMSS1-208ENST00000496116 VKORC1L1Q8N0U8 176 aa9.14□□□□□ -0.95
CMSS1-208ENST00000496116 LYG1Q8N1E2 194 aa9.14□□□□□ -0.95
CMSS1-208ENST00000496116 CCL13Q99616 98 aa9.14□□□□□ -0.95
CMSS1-208ENST00000496116 TMEM242Q9NWH2 141 aa9.14□□□□□ -0.95
CMSS1-208ENST00000496116 RAI1Q7Z5J4 1906 aaPredicted RBP9.13□□□□□ -0.95
CMSS1-208ENST00000496116 DYSFO75923 2080 aa9.13□□□□□ -0.95
CMSS1-208ENST00000496116 TRGV8A0A0C4DH27 118 aa9.13□□□□□ -0.95
CMSS1-208ENST00000496116 hADV38S2A0JD32 116 aa9.13□□□□□ -0.95
CMSS1-208ENST00000496116 NKX6-3A6NJ46 265 aa9.13□□□□□ -0.95
CMSS1-208ENST00000496116 TMEM250H0YL14 139 aa9.13□□□□□ -0.95
CMSS1-208ENST00000496116 UBE2CO00762 179 aa9.13□□□□□ -0.95
CMSS1-208ENST00000496116 NDUFS6O75380 124 aaKnown RBP9.13□□□□□ -0.95
CMSS1-208ENST00000496116 RPS10P46783 165 aaKnown RBP9.13□□□□□ -0.95
CMSS1-208ENST00000496116 MRPS11P82912 194 aaKnown RBP9.13□□□□□ -0.95
CMSS1-208ENST00000496116 GFRALQ6UXV0 394 aa9.13□□□□□ -0.95
CMSS1-208ENST00000496116 CISD2Q8N5K1 135 aaKnown RBP9.13□□□□□ -0.95
CMSS1-208ENST00000496116 CORO2AQ92828 525 aa9.13□□□□□ -0.95
CMSS1-208ENST00000496116 LEAP2Q969E1 77 aa9.13□□□□□ -0.95
CMSS1-208ENST00000496116 C12orf57Q99622 126 aa9.13□□□□□ -0.95
CMSS1-208ENST00000496116 LINC00574Q9H8X3 128 aa9.13□□□□□ -0.95
CMSS1-208ENST00000496116 SDF2L1Q9HCN8 221 aa9.13□□□□□ -0.95
CMSS1-208ENST00000496116 WDR83OSQ9Y284 106 aa9.13□□□□□ -0.95
CMSS1-208ENST00000496116 CUL9Q8IWT3 2517 aa9.13□□□□□ -0.95
CMSS1-208ENST00000496116 A0A1W2PPE3 182 aa9.13□□□□□ -0.95
CMSS1-208ENST00000496116 SMCO3A2RU48 225 aa9.13□□□□□ -0.95
CMSS1-208ENST00000496116 C15orf61A6NNL5 157 aa9.13□□□□□ -0.95
CMSS1-208ENST00000496116 VSTM5A8MXK1 200 aa9.13□□□□□ -0.95
CMSS1-208ENST00000496116 HMGB3O15347 200 aaKnown RBP9.13□□□□□ -0.95
CMSS1-208ENST00000496116 VDAC2P45880 294 aaPredicted RBP9.13□□□□□ -0.95
CMSS1-208ENST00000496116 CDC34P49427 236 aaPredicted RBP9.13□□□□□ -0.95
CMSS1-208ENST00000496116 TLE1Q04724 770 aa9.13□□□□□ -0.95
CMSS1-208ENST00000496116 DUX4L9Q6RFH8 374 aaPredicted RBP9.13□□□□□ -0.95
CMSS1-208ENST00000496116 FAM216BQ8N7L0 139 aa9.13□□□□□ -0.95
CMSS1-208ENST00000496116 RAB24Q969Q5 203 aa9.13□□□□□ -0.95
CMSS1-208ENST00000496116 RHOVQ96L33 236 aa9.13□□□□□ -0.95
CMSS1-208ENST00000496116 METTL1Q9UBP6 276 aaKnown RBP9.13□□□□□ -0.95
CMSS1-208ENST00000496116 TRAV38-1A0A0B4J264 116 aa9.12□□□□□ -0.95
CMSS1-208ENST00000496116 C17orf100A8MU93 164 aa9.12□□□□□ -0.95
CMSS1-208ENST00000496116 CLDN34H7C241 214 aa9.12□□□□□ -0.95
CMSS1-208ENST00000496116 ATXN7O15265 892 aaPredicted RBP9.12□□□□□ -0.95
CMSS1-208ENST00000496116 TMPRSS2O15393 492 aa9.12□□□□□ -0.95
CMSS1-208ENST00000496116 GFRA3O60609 400 aa9.12□□□□□ -0.95
CMSS1-208ENST00000496116 HRASP01112 189 aa9.12□□□□□ -0.95
CMSS1-208ENST00000496116 S100A8P05109 93 aa9.12□□□□□ -0.95
CMSS1-208ENST00000496116 OR4A8P0C604 315 aa9.12□□□□□ -0.95
CMSS1-208ENST00000496116 MEOX2P50222 304 aa9.12□□□□□ -0.95
CMSS1-208ENST00000496116 CD81P60033 236 aa9.12□□□□□ -0.95
CMSS1-208ENST00000496116 CCL8P80075 99 aa9.12□□□□□ -0.95
CMSS1-208ENST00000496116 WDR25Q64LD2 544 aaPredicted RBP9.12□□□□□ -0.95
CMSS1-208ENST00000496116 ZNF439Q8NDP4 499 aa9.12□□□□□ -0.95
CMSS1-208ENST00000496116 Q8WTZ3 238 aa9.12□□□□□ -0.95
CMSS1-208ENST00000496116 SMIM7Q9BQ49 75 aa9.12□□□□□ -0.95
CMSS1-208ENST00000496116 ENY2Q9NPA8 101 aa9.12□□□□□ -0.95
CMSS1-208ENST00000496116 NAT8Q9UHE5 227 aa9.12□□□□□ -0.95
CMSS1-208ENST00000496116 TCF19Q9Y242 345 aa9.12□□□□□ -0.95
CMSS1-208ENST00000496116 URGCP-MRPS24S4R325 110 aa9.12□□□□□ -0.95
CMSS1-208ENST00000496116 BOD1L1Q8NFC6 3051 aa9.12□□□□□ -0.95
CMSS1-208ENST00000496116 PLCE1Q9P212 2302 aa9.11□□□□□ -0.95
CMSS1-208ENST00000496116 TRAV3A0A0B4J244 114 aa9.11□□□□□ -0.95
CMSS1-208ENST00000496116 DPRXA6NFQ7 191 aa9.11□□□□□ -0.95
CMSS1-208ENST00000496116 EIF3GO75821 320 aaKnown RBP eCLIP9.11□□□□□ -0.95
CMSS1-208ENST00000496116 NDUFB7P17568 137 aa9.11□□□□□ -0.95
CMSS1-208ENST00000496116 GNG10P50151 68 aa9.11□□□□□ -0.95
CMSS1-208ENST00000496116 TMPRSS3P57727 454 aa9.11□□□□□ -0.95
CMSS1-208ENST00000496116 BSPH1Q075Z2 132 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms