RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 WFIKKN1Q96NZ8 548 aa10.82□□□□□ -0.68
PTPN7-217ENST00000495688 CIB3Q96Q77 187 aaPredicted RBP10.82□□□□□ -0.68
PTPN7-217ENST00000495688 CXXC4Q9H2H0 198 aa10.82□□□□□ -0.68
PTPN7-217ENST00000495688 TRAV3A0A0B4J244 114 aa10.81□□□□□ -0.68
PTPN7-217ENST00000495688 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.81□□□□□ -0.68
PTPN7-217ENST00000495688 C15orf65H3BRN8 121 aa10.81□□□□□ -0.68
PTPN7-217ENST00000495688 IFNL4K9M1U5 179 aa10.81□□□□□ -0.68
PTPN7-217ENST00000495688 GNB1P62873 340 aa10.81□□□□□ -0.68
PTPN7-217ENST00000495688 TMEM178AQ8NBL3 297 aa10.81□□□□□ -0.68
PTPN7-217ENST00000495688 ZNF114Q8NC26 417 aa10.81□□□□□ -0.68
PTPN7-217ENST00000495688 SDSLQ96GA7 329 aa10.81□□□□□ -0.68
PTPN7-217ENST00000495688 TAAR6Q96RI8 345 aa10.81□□□□□ -0.68
PTPN7-217ENST00000495688 OR6C3Q9NZP0 311 aa10.81□□□□□ -0.68
PTPN7-217ENST00000495688 ATMQ13315 3056 aa10.81□□□□□ -0.68
PTPN7-217ENST00000495688 PLCE1Q9P212 2302 aa10.81□□□□□ -0.68
PTPN7-217ENST00000495688 RRHO14718 337 aa10.81□□□□□ -0.68
PTPN7-217ENST00000495688 NDUFB4O95168 129 aa10.81□□□□□ -0.68
PTPN7-217ENST00000495688 DDTP30046 118 aa10.81□□□□□ -0.68
PTPN7-217ENST00000495688 KIR2DL2P43627 348 aaPredicted RBP10.81□□□□□ -0.68
PTPN7-217ENST00000495688 NUBP1P53384 320 aa10.81□□□□□ -0.68
PTPN7-217ENST00000495688 RPL39P5Q59GN2 51 aa10.81□□□□□ -0.68
PTPN7-217ENST00000495688 LRRC29Q8WV35 223 aa10.81□□□□□ -0.68
PTPN7-217ENST00000495688 TTC28Q96AY4 2481 aa10.81□□□□□ -0.68
PTPN7-217ENST00000495688 SOX15O60248 233 aa10.81□□□□□ -0.68
PTPN7-217ENST00000495688 IFNA10P01566 189 aa10.81□□□□□ -0.68
PTPN7-217ENST00000495688 C1QTNF9P0C862 333 aa10.81□□□□□ -0.68
PTPN7-217ENST00000495688 CD82P27701 267 aa10.81□□□□□ -0.68
PTPN7-217ENST00000495688 DUTP33316 252 aaKnown RBP10.81□□□□□ -0.68
PTPN7-217ENST00000495688 SPRNQ5BIV9 151 aa10.81□□□□□ -0.68
PTPN7-217ENST00000495688 LINC01551Q86U37 167 aa10.81□□□□□ -0.68
PTPN7-217ENST00000495688 C9orf106Q8NAJ2 232 aa10.81□□□□□ -0.68
PTPN7-217ENST00000495688 OR2T10Q8NGZ9 312 aa10.81□□□□□ -0.68
PTPN7-217ENST00000495688 PRR7Q8TB68 274 aa10.81□□□□□ -0.68
PTPN7-217ENST00000495688 HSD17B10Q99714 261 aaKnown RBP10.81□□□□□ -0.68
PTPN7-217ENST00000495688 WDR83OSQ9Y284 106 aa10.81□□□□□ -0.68
PTPN7-217ENST00000495688 TNCP24821 2201 aa10.81□□□□□ -0.68
PTPN7-217ENST00000495688 IGHV3OR15-7A0A075B7D8 119 aa10.8□□□□□ -0.68
PTPN7-217ENST00000495688 A0A087X0M5 115 aa10.8□□□□□ -0.68
PTPN7-217ENST00000495688 A0A1B0GX30 115 aa10.8□□□□□ -0.68
PTPN7-217ENST00000495688 NKX2-8O15522 239 aa10.8□□□□□ -0.68
PTPN7-217ENST00000495688 HOXC12P31275 282 aa10.8□□□□□ -0.68
PTPN7-217ENST00000495688 GPR12P47775 334 aa10.8□□□□□ -0.68
PTPN7-217ENST00000495688 CCL11P51671 97 aa10.8□□□□□ -0.68
PTPN7-217ENST00000495688 ZNF134P52741 427 aa10.8□□□□□ -0.68
PTPN7-217ENST00000495688 SMIM21Q3B7S5 101 aa10.8□□□□□ -0.68
PTPN7-217ENST00000495688 PRAMEF5Q5TYX0 476 aa10.8□□□□□ -0.68
PTPN7-217ENST00000495688 FAM78BQ5VT40 261 aa10.8□□□□□ -0.68
PTPN7-217ENST00000495688 ZNF600Q6ZNG1 722 aa10.8□□□□□ -0.68
PTPN7-217ENST00000495688 TGIF2LYQ8IUE0 185 aa10.8□□□□□ -0.68
PTPN7-217ENST00000495688 ABHD12Q8N2K0 398 aa10.8□□□□□ -0.68
PTPN7-217ENST00000495688 LEAP2Q969E1 77 aa10.8□□□□□ -0.68
PTPN7-217ENST00000495688 LURAP1Q96LR2 239 aa10.8□□□□□ -0.68
PTPN7-217ENST00000495688 GNG12Q9UBI6 72 aa10.8□□□□□ -0.68
PTPN7-217ENST00000495688 WASF3Q9UPY6 502 aa10.8□□□□□ -0.68
PTPN7-217ENST00000495688 A0A1B0GUS0 222 aa10.8□□□□□ -0.68
PTPN7-217ENST00000495688 C17orf112F2Z3M2 114 aa10.8□□□□□ -0.68
PTPN7-217ENST00000495688 SPINT2O43291 252 aa10.8□□□□□ -0.68
PTPN7-217ENST00000495688 SP9P0CG40 484 aa10.8□□□□□ -0.68
PTPN7-217ENST00000495688 PRDX2P32119 198 aa10.8□□□□□ -0.68
PTPN7-217ENST00000495688 PKIAP61925 76 aa10.8□□□□□ -0.68
PTPN7-217ENST00000495688 JOSD1Q15040 202 aaPredicted RBP10.8□□□□□ -0.68
PTPN7-217ENST00000495688 ACOT6Q3I5F7 207 aaPredicted RBP10.8□□□□□ -0.68
PTPN7-217ENST00000495688 C1orf229Q6ZS94 237 aaPredicted RBP10.8□□□□□ -0.68
PTPN7-217ENST00000495688 TRBV20OR9-2A0A075B6H5 130 aa10.79□□□□□ -0.68
PTPN7-217ENST00000495688 M0R1X1 148 aa10.79□□□□□ -0.68
PTPN7-217ENST00000495688 HNF1AP20823 631 aa10.79□□□□□ -0.68
PTPN7-217ENST00000495688 MSMPQ1L6U9 139 aa10.79□□□□□ -0.68
PTPN7-217ENST00000495688 TREML4Q6UXN2 200 aa10.79□□□□□ -0.68
PTPN7-217ENST00000495688 LRP11Q86VZ4 500 aa10.79□□□□□ -0.68
PTPN7-217ENST00000495688 DEFB123Q8N688 67 aa10.79□□□□□ -0.68
PTPN7-217ENST00000495688 ZNRF1Q8ND25 227 aa10.79□□□□□ -0.68
PTPN7-217ENST00000495688 OR2Z1Q8NG97 314 aa10.79□□□□□ -0.68
PTPN7-217ENST00000495688 TMEM170AQ8WVE7 144 aa10.79□□□□□ -0.68
PTPN7-217ENST00000495688 DUSP13Q9UII6 198 aa10.79□□□□□ -0.68
PTPN7-217ENST00000495688 ROS1P08922 2347 aa10.79□□□□□ -0.68
PTPN7-217ENST00000495688 IGKV1D-17A0A075B6S4 117 aa10.79□□□□□ -0.68
PTPN7-217ENST00000495688 A0A1B0GV90 55 aa10.79□□□□□ -0.68
PTPN7-217ENST00000495688 A0A1W2PPV4 95 aa10.79□□□□□ -0.68
PTPN7-217ENST00000495688 TSTD3H0UI37 97 aa10.79□□□□□ -0.68
PTPN7-217ENST00000495688 GGCTO75223 188 aaKnown RBP10.79□□□□□ -0.68
PTPN7-217ENST00000495688 ARL14EPLP0DKL9 152 aa10.79□□□□□ -0.68
PTPN7-217ENST00000495688 GUSBP1Q15486 140 aa10.79□□□□□ -0.68
PTPN7-217ENST00000495688 ACTL10Q5JWF8 245 aa10.79□□□□□ -0.68
PTPN7-217ENST00000495688 MIC13Q5XKP0 118 aa10.79□□□□□ -0.68
PTPN7-217ENST00000495688 FDCSPQ8NFU4 85 aa10.79□□□□□ -0.68
PTPN7-217ENST00000495688 ANAPC16Q96DE5 110 aa10.79□□□□□ -0.68
PTPN7-217ENST00000495688 HEYLQ9NQ87 328 aaPredicted RBP10.79□□□□□ -0.68
PTPN7-217ENST00000495688 ZNF705GA8MUZ8 300 aaPredicted RBP10.78□□□□□ -0.68
PTPN7-217ENST00000495688 RBFOX2O43251 390 aaKnown RBP eCLIP10.78□□□□□ -0.68
PTPN7-217ENST00000495688 IL3RAP26951 378 aa10.78□□□□□ -0.68
PTPN7-217ENST00000495688 MORN2Q502X0 79 aa10.78□□□□□ -0.68
PTPN7-217ENST00000495688 ZNF664Q8N3J9 261 aa10.78□□□□□ -0.68
PTPN7-217ENST00000495688 SSMEM1Q8WWF3 244 aa10.78□□□□□ -0.68
PTPN7-217ENST00000495688 MS4A5Q9H3V2 200 aa10.78□□□□□ -0.68
PTPN7-217ENST00000495688 AQP7O14520 342 aa10.78□□□□□ -0.68
PTPN7-217ENST00000495688 DVL1O14640 695 aa10.78□□□□□ -0.68
PTPN7-217ENST00000495688 SLC31A2O15432 143 aa10.78□□□□□ -0.68
PTPN7-217ENST00000495688 DSCAMO60469 2012 aa10.78□□□□□ -0.68
PTPN7-217ENST00000495688 VENTXO95231 258 aa10.78□□□□□ -0.68
PTPN7-217ENST00000495688 GCH1P30793 250 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms