RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 TEX45Q8NA69 505 aa7.37□□□□□ -1.23
MSH5-218ENST00000494646 LGALS14Q8TCE9 139 aa7.37□□□□□ -1.23
MSH5-218ENST00000494646 ACOT12Q8WYK0 555 aa7.37□□□□□ -1.23
MSH5-218ENST00000494646 DDB2Q92466 427 aa7.37□□□□□ -1.23
MSH5-218ENST00000494646 FCGR1BQ92637 280 aa7.37□□□□□ -1.23
MSH5-218ENST00000494646 GPHA2Q96T91 129 aa7.37□□□□□ -1.23
MSH5-218ENST00000494646 CENPOQ9BU64 300 aa7.37□□□□□ -1.23
MSH5-218ENST00000494646 RANGRFQ9HD47 186 aaPredicted RBP7.37□□□□□ -1.23
MSH5-218ENST00000494646 ADAM30Q9UKF2 790 aa7.37□□□□□ -1.23
MSH5-218ENST00000494646 SPATA2Q9UM82 520 aa7.37□□□□□ -1.23
MSH5-218ENST00000494646 OR2W1Q9Y3N9 320 aa7.37□□□□□ -1.23
MSH5-218ENST00000494646 U3KQK5 164 aa7.37□□□□□ -1.23
MSH5-218ENST00000494646 STARD9Q9P2P6 4700 aa7.37□□□□□ -1.23
MSH5-218ENST00000494646 TRAV18A0A075B6X5 111 aa7.36□□□□□ -1.23
MSH5-218ENST00000494646 IGKV1D-13A0A0B4J2D9 117 aa7.36□□□□□ -1.23
MSH5-218ENST00000494646 A0A0G2JLM5 398 aa7.36□□□□□ -1.23
MSH5-218ENST00000494646 TRIM64CA6NLI5 447 aa7.36□□□□□ -1.23
MSH5-218ENST00000494646 MPPED1O15442 326 aa7.36□□□□□ -1.23
MSH5-218ENST00000494646 RBMXL2O75526 392 aaKnown RBP7.36□□□□□ -1.23
MSH5-218ENST00000494646 DIRAS3O95661 229 aa7.36□□□□□ -1.23
MSH5-218ENST00000494646 TRBV12-3P01733 135 aa7.36□□□□□ -1.23
MSH5-218ENST00000494646 PRH1P02810 166 aa7.36□□□□□ -1.23
MSH5-218ENST00000494646 CTXN2P0C2S0 81 aa7.36□□□□□ -1.23
MSH5-218ENST00000494646 IGKV1-13P0DP09 117 aa7.36□□□□□ -1.23
MSH5-218ENST00000494646 CD36P16671 472 aa7.36□□□□□ -1.23
MSH5-218ENST00000494646 UBE2KP61086 200 aa7.36□□□□□ -1.23
MSH5-218ENST00000494646 SUMO1P63165 101 aaKnown RBP7.36□□□□□ -1.23
MSH5-218ENST00000494646 PRSS8Q16651 343 aa7.36□□□□□ -1.23
MSH5-218ENST00000494646 VMA21Q3ZAQ7 101 aa7.36□□□□□ -1.23
MSH5-218ENST00000494646 ZNF773Q6PK81 442 aa7.36□□□□□ -1.23
MSH5-218ENST00000494646 VKORC1L1Q8N0U8 176 aa7.36□□□□□ -1.23
MSH5-218ENST00000494646 ZNF645Q8N7E2 425 aa7.36□□□□□ -1.23
MSH5-218ENST00000494646 GVQW1Q8N7I0 195 aa7.36□□□□□ -1.23
MSH5-218ENST00000494646 OR6Q1Q8NGQ2 317 aa7.36□□□□□ -1.23
MSH5-218ENST00000494646 ADTRPQ96IZ2 230 aa7.36□□□□□ -1.23
MSH5-218ENST00000494646 ELOVL1Q9BW60 279 aa7.36□□□□□ -1.23
MSH5-218ENST00000494646 TINAGL1Q9GZM7 467 aaPredicted RBP7.36□□□□□ -1.23
MSH5-218ENST00000494646 DCSTAMPQ9H295 470 aa7.36□□□□□ -1.23
MSH5-218ENST00000494646 RHBDL2Q9NX52 303 aa7.36□□□□□ -1.23
MSH5-218ENST00000494646 CSMD3Q7Z407 3707 aa7.36□□□□□ -1.23
MSH5-218ENST00000494646 H3BUA1 57 aa7.35□□□□□ -1.23
MSH5-218ENST00000494646 IGLV2-14P01704 120 aa7.35□□□□□ -1.23
MSH5-218ENST00000494646 TGFBR1P36897 503 aa7.35□□□□□ -1.23
MSH5-218ENST00000494646 SYNJ2BPP57105 145 aa7.35□□□□□ -1.23
MSH5-218ENST00000494646 C16orf54Q6UWD8 224 aa7.35□□□□□ -1.23
MSH5-218ENST00000494646 KCTD9Q7L273 389 aa7.35□□□□□ -1.23
MSH5-218ENST00000494646 ANKRD13BQ86YJ7 626 aa7.35□□□□□ -1.23
MSH5-218ENST00000494646 OSR1Q8TAX0 266 aaPredicted RBP7.35□□□□□ -1.23
MSH5-218ENST00000494646 SRSF12Q8WXF0 261 aaKnown RBP7.35□□□□□ -1.23
MSH5-218ENST00000494646 TMEM68Q96MH6 324 aa7.35□□□□□ -1.23
MSH5-218ENST00000494646 ZNF430Q9H8G1 570 aaPredicted RBP7.35□□□□□ -1.23
MSH5-218ENST00000494646 CCL28Q9NRJ3 127 aa7.35□□□□□ -1.23
MSH5-218ENST00000494646 PEF1Q9UBV8 284 aaKnown RBP7.35□□□□□ -1.23
MSH5-218ENST00000494646 ANXA10Q9UJ72 324 aa7.35□□□□□ -1.23
MSH5-218ENST00000494646 RBMX2Q9Y388 322 aaKnown RBP7.35□□□□□ -1.23
MSH5-218ENST00000494646 MEIS3P1A6NDR6 274 aa7.34□□□□□ -1.23
MSH5-218ENST00000494646 HMX3A6NHT5 357 aa7.34□□□□□ -1.23
MSH5-218ENST00000494646 TNFSF12O43508 249 aa7.34□□□□□ -1.23
MSH5-218ENST00000494646 ACTL6BO94805 426 aa7.34□□□□□ -1.23
MSH5-218ENST00000494646 OR9G9P0C7N8 305 aa7.34□□□□□ -1.23
MSH5-218ENST00000494646 FRMD6-AS1P0C7T7 363 aa7.34□□□□□ -1.23
MSH5-218ENST00000494646 SAA1P0DJI8 122 aaPredicted RBP7.34□□□□□ -1.23
MSH5-218ENST00000494646 ZP3P21754 424 aa7.34□□□□□ -1.23
MSH5-218ENST00000494646 AADACP22760 399 aa7.34□□□□□ -1.23
MSH5-218ENST00000494646 FCGR2CP31995 323 aa7.34□□□□□ -1.23
MSH5-218ENST00000494646 BRWD1-AS2P59051 145 aa7.34□□□□□ -1.23
MSH5-218ENST00000494646 LSM3P62310 102 aaKnown RBP7.34□□□□□ -1.23
MSH5-218ENST00000494646 DYRK1AQ13627 763 aa7.34□□□□□ -1.23
MSH5-218ENST00000494646 KLF5Q13887 457 aaPredicted RBP7.34□□□□□ -1.23
MSH5-218ENST00000494646 CDK10Q15131 360 aa7.34□□□□□ -1.23
MSH5-218ENST00000494646 C10orf55Q5SWW7 151 aa7.34□□□□□ -1.23
MSH5-218ENST00000494646 CFAP161Q6P656 301 aa7.34□□□□□ -1.23
MSH5-218ENST00000494646 SSX9Q7RTT3 188 aa7.34□□□□□ -1.23
MSH5-218ENST00000494646 MMD2Q8IY49 270 aa7.34□□□□□ -1.23
MSH5-218ENST00000494646 MFSD4AQ8N468 514 aa7.34□□□□□ -1.23
MSH5-218ENST00000494646 ADAD2Q8NCV1 583 aaKnown RBP7.34□□□□□ -1.23
MSH5-218ENST00000494646 BEST4Q8NFU0 473 aa7.34□□□□□ -1.23
MSH5-218ENST00000494646 SECTM1Q8WVN6 248 aa7.34□□□□□ -1.23
MSH5-218ENST00000494646 TCTEX1D2Q8WW35 142 aa7.34□□□□□ -1.23
MSH5-218ENST00000494646 TAS2R8Q9NYW2 309 aa7.34□□□□□ -1.23
MSH5-218ENST00000494646 PRELID3BQ9Y3B1 194 aa7.34□□□□□ -1.23
MSH5-218ENST00000494646 RYR2Q92736 4967 aa7.34□□□□□ -1.23
MSH5-218ENST00000494646 E7EUB6 86 aa7.33□□□□□ -1.24
MSH5-218ENST00000494646 OR2J3O76001 311 aa7.33□□□□□ -1.24
MSH5-218ENST00000494646 SCGNO76038 276 aa7.33□□□□□ -1.24
MSH5-218ENST00000494646 SLC22A5O76082 557 aa7.33□□□□□ -1.24
MSH5-218ENST00000494646 IGLV1-51P01701 117 aa7.33□□□□□ -1.24
MSH5-218ENST00000494646 MYOD1P15172 320 aa7.33□□□□□ -1.24
MSH5-218ENST00000494646 ARPC4P59998 168 aa7.33□□□□□ -1.24
MSH5-218ENST00000494646 ZNF45Q02386 682 aa7.33□□□□□ -1.24
MSH5-218ENST00000494646 ATP5G2Q06055 141 aa7.33□□□□□ -1.24
MSH5-218ENST00000494646 TATDN3Q17R31 274 aa7.33□□□□□ -1.24
MSH5-218ENST00000494646 ZNF343Q6P1L6 599 aa7.33□□□□□ -1.24
MSH5-218ENST00000494646 IL34Q6ZMJ4 242 aa7.33□□□□□ -1.24
MSH5-218ENST00000494646 C19orf35Q6ZS72 473 aa7.33□□□□□ -1.24
MSH5-218ENST00000494646 Q8N1Y9 231 aa7.33□□□□□ -1.24
MSH5-218ENST00000494646 OR9G4Q8NGQ1 327 aa7.33□□□□□ -1.24
MSH5-218ENST00000494646 SLC25A38Q96DW6 304 aa7.33□□□□□ -1.24
MSH5-218ENST00000494646 USMG5Q96IX5 58 aa7.33□□□□□ -1.24
MSH5-218ENST00000494646 FYTTD1Q96QD9 318 aaKnown RBP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms