RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 RPL23AP62750 156 aaKnown RBP6.85□□□□□ -1.31
ITGB1-217ENST00000494395 PJVKQ0ZLH3 352 aa6.85□□□□□ -1.31
ITGB1-217ENST00000494395 FOXE3Q13461 319 aa6.85□□□□□ -1.31
ITGB1-217ENST00000494395 KIAA0141Q14154 515 aaPredicted RBP6.85□□□□□ -1.31
ITGB1-217ENST00000494395 ZNF562Q6V9R5 426 aa6.85□□□□□ -1.31
ITGB1-217ENST00000494395 ZNF66Q6ZN08 573 aa6.85□□□□□ -1.31
ITGB1-217ENST00000494395 C18orf65Q6ZTR6 163 aa6.85□□□□□ -1.31
ITGB1-217ENST00000494395 KCTD9Q7L273 389 aa6.85□□□□□ -1.31
ITGB1-217ENST00000494395 MINDY2Q8NBR6 621 aa6.85□□□□□ -1.31
ITGB1-217ENST00000494395 FAM110DQ8TAY7 271 aaPredicted RBP6.85□□□□□ -1.31
ITGB1-217ENST00000494395 SECTM1Q8WVN6 248 aa6.85□□□□□ -1.31
ITGB1-217ENST00000494395 MOB3AQ96BX8 217 aa6.85□□□□□ -1.31
ITGB1-217ENST00000494395 HARBI1Q96MB7 349 aa6.85□□□□□ -1.31
ITGB1-217ENST00000494395 HSD17B10Q99714 261 aaKnown RBP6.85□□□□□ -1.31
ITGB1-217ENST00000494395 NXF2Q9GZY0 626 aaKnown RBP6.85□□□□□ -1.31
ITGB1-217ENST00000494395 FXYD6Q9H0Q3 95 aa6.85□□□□□ -1.31
ITGB1-217ENST00000494395 CCL28Q9NRJ3 127 aa6.85□□□□□ -1.31
ITGB1-217ENST00000494395 EHFQ9NZC4 300 aa6.85□□□□□ -1.31
ITGB1-217ENST00000494395 METTL1Q9UBP6 276 aaKnown RBP6.85□□□□□ -1.31
ITGB1-217ENST00000494395 EXTL2Q9UBQ6 330 aa6.85□□□□□ -1.31
ITGB1-217ENST00000494395 MRPS7Q9Y2R9 242 aaKnown RBP6.85□□□□□ -1.31
ITGB1-217ENST00000494395 A0A1W2PRX2 142 aa6.84□□□□□ -1.31
ITGB1-217ENST00000494395 SOX15O60248 233 aa6.84□□□□□ -1.31
ITGB1-217ENST00000494395 CRYZL1O95825 349 aa6.84□□□□□ -1.31
ITGB1-217ENST00000494395 SCGB1D2O95969 90 aa6.84□□□□□ -1.31
ITGB1-217ENST00000494395 CA2P00918 260 aa6.84□□□□□ -1.31
ITGB1-217ENST00000494395 PMP2P02689 132 aa6.84□□□□□ -1.31
ITGB1-217ENST00000494395 VDAC1P21796 283 aa6.84□□□□□ -1.31
ITGB1-217ENST00000494395 GNRHRP30968 328 aa6.84□□□□□ -1.31
ITGB1-217ENST00000494395 FXYD4P59646 89 aa6.84□□□□□ -1.31
ITGB1-217ENST00000494395 SLC35B1P78383 322 aa6.84□□□□□ -1.31
ITGB1-217ENST00000494395 RTL8BQ17RB0 113 aa6.84□□□□□ -1.31
ITGB1-217ENST00000494395 CT83Q5H943 113 aa6.84□□□□□ -1.31
ITGB1-217ENST00000494395 TEX38Q6PEX7 206 aa6.84□□□□□ -1.31
ITGB1-217ENST00000494395 ZNF818PQ6ZRF7 136 aa6.84□□□□□ -1.31
ITGB1-217ENST00000494395 LCNL1Q6ZST4 164 aa6.84□□□□□ -1.31
ITGB1-217ENST00000494395 PPP1R27Q86WC6 154 aa6.84□□□□□ -1.31
ITGB1-217ENST00000494395 TEX45Q8NA69 505 aa6.84□□□□□ -1.31
ITGB1-217ENST00000494395 ZBTB34Q8NCN2 500 aa6.84□□□□□ -1.31
ITGB1-217ENST00000494395 OR4F17Q8NGA8 305 aa6.84□□□□□ -1.31
ITGB1-217ENST00000494395 OR5H2Q8NGV7 314 aa6.84□□□□□ -1.31
ITGB1-217ENST00000494395 OR52I2Q8NH67 350 aa6.84□□□□□ -1.31
ITGB1-217ENST00000494395 OSR1Q8TAX0 266 aaPredicted RBP6.84□□□□□ -1.31
ITGB1-217ENST00000494395 R3HDM4Q96D70 268 aa6.84□□□□□ -1.31
ITGB1-217ENST00000494395 OR4F4Q96R69 305 aa6.84□□□□□ -1.31
ITGB1-217ENST00000494395 GPHA2Q96T91 129 aa6.84□□□□□ -1.31
ITGB1-217ENST00000494395 SOSTQ9BQB4 213 aa6.84□□□□□ -1.31
ITGB1-217ENST00000494395 ZNF2Q9BSG1 426 aaPredicted RBP6.84□□□□□ -1.31
ITGB1-217ENST00000494395 GON7Q9BXV9 100 aa6.84□□□□□ -1.31
ITGB1-217ENST00000494395 SLC5A7Q9GZV3 580 aa6.84□□□□□ -1.31
ITGB1-217ENST00000494395 PARP11Q9NR21 331 aa6.84□□□□□ -1.31
ITGB1-217ENST00000494395 ZFP57Q9NU63 452 aa6.84□□□□□ -1.31
ITGB1-217ENST00000494395 KLK11Q9UBX7 282 aa6.84□□□□□ -1.31
ITGB1-217ENST00000494395 MTFP1Q9UDX5 166 aa6.84□□□□□ -1.31
ITGB1-217ENST00000494395 PRELID3BQ9Y3B1 194 aa6.84□□□□□ -1.31
ITGB1-217ENST00000494395 WSB1Q9Y6I7 421 aa6.84□□□□□ -1.31
ITGB1-217ENST00000494395 TRAV41A0A0B4J266 112 aa6.83□□□□□ -1.32
ITGB1-217ENST00000494395 ZNF701M0R085 212 aaPredicted RBP6.83□□□□□ -1.32
ITGB1-217ENST00000494395 RGS5O15539 181 aa6.83□□□□□ -1.32
ITGB1-217ENST00000494395 FCGR3BO75015 233 aa6.83□□□□□ -1.32
ITGB1-217ENST00000494395 SAA1P0DJI8 122 aaPredicted RBP6.83□□□□□ -1.32
ITGB1-217ENST00000494395 HLA-DMAP28067 261 aa6.83□□□□□ -1.32
ITGB1-217ENST00000494395 CDX1P47902 265 aaPredicted RBP6.83□□□□□ -1.32
ITGB1-217ENST00000494395 UBE2KP61086 200 aa6.83□□□□□ -1.32
ITGB1-217ENST00000494395 DGCR2P98153 550 aa6.83□□□□□ -1.32
ITGB1-217ENST00000494395 PLGLAQ15195 96 aa6.83□□□□□ -1.32
ITGB1-217ENST00000494395 CXorf66Q5JRM2 361 aaPredicted RBP6.83□□□□□ -1.32
ITGB1-217ENST00000494395 VAX1Q5SQQ9 334 aa6.83□□□□□ -1.32
ITGB1-217ENST00000494395 ASPHD1Q5U4P2 390 aa6.83□□□□□ -1.32
ITGB1-217ENST00000494395 TMEM17Q86X19 198 aa6.83□□□□□ -1.32
ITGB1-217ENST00000494395 WFDC9Q8NEX5 89 aa6.83□□□□□ -1.32
ITGB1-217ENST00000494395 TCTEX1D2Q8WW35 142 aa6.83□□□□□ -1.32
ITGB1-217ENST00000494395 CLCC1Q96S66 551 aa6.83□□□□□ -1.32
ITGB1-217ENST00000494395 FAM103A1Q9BTL3 118 aaKnown RBP6.83□□□□□ -1.32
ITGB1-217ENST00000494395 KLK15Q9H2R5 256 aa6.83□□□□□ -1.32
ITGB1-217ENST00000494395 TAS2R8Q9NYW2 309 aa6.83□□□□□ -1.32
ITGB1-217ENST00000494395 GABARAPH6UMI1 98 aa6.82□□□□□ -1.32
ITGB1-217ENST00000494395 M0QYG6 137 aa6.82□□□□□ -1.32
ITGB1-217ENST00000494395 CTDSPLO15194 276 aa6.82□□□□□ -1.32
ITGB1-217ENST00000494395 RBFOX2O43251 390 aaKnown RBP eCLIP6.82□□□□□ -1.32
ITGB1-217ENST00000494395 TNFSF12O43508 249 aa6.82□□□□□ -1.32
ITGB1-217ENST00000494395 RAMP3O60896 148 aa6.82□□□□□ -1.32
ITGB1-217ENST00000494395 NOL3O60936 208 aaKnown RBP6.82□□□□□ -1.32
ITGB1-217ENST00000494395 CD74P04233 296 aa6.82□□□□□ -1.32
ITGB1-217ENST00000494395 CD3DP04234 171 aa6.82□□□□□ -1.32
ITGB1-217ENST00000494395 SLC6A1P30531 599 aa6.82□□□□□ -1.32
ITGB1-217ENST00000494395 UCP3P55916 312 aa6.82□□□□□ -1.32
ITGB1-217ENST00000494395 HERV-K104P61576 105 aa6.82□□□□□ -1.32
ITGB1-217ENST00000494395 CBX3Q13185 183 aa6.82□□□□□ -1.32
ITGB1-217ENST00000494395 FXYD3Q14802 87 aa6.82□□□□□ -1.32
ITGB1-217ENST00000494395 PRSS8Q16651 343 aa6.82□□□□□ -1.32
ITGB1-217ENST00000494395 VMA21Q3ZAQ7 101 aa6.82□□□□□ -1.32
ITGB1-217ENST00000494395 AKIRIN2Q53H80 203 aa6.82□□□□□ -1.32
ITGB1-217ENST00000494395 RNASE12Q5GAN4 147 aaKnown RBP6.82□□□□□ -1.32
ITGB1-217ENST00000494395 OR2B11Q5JQS5 317 aa6.82□□□□□ -1.32
ITGB1-217ENST00000494395 KHDC1LQ5JSQ8 128 aa6.82□□□□□ -1.32
ITGB1-217ENST00000494395 AADACL3Q5VUY0 350 aa6.82□□□□□ -1.32
ITGB1-217ENST00000494395 IDO2Q6ZQW0 420 aa6.82□□□□□ -1.32
ITGB1-217ENST00000494395 LHFPL1Q86WI0 220 aa6.82□□□□□ -1.32
ITGB1-217ENST00000494395 PUSL1Q8N0Z8 303 aaKnown RBP6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms