RNA–Protein interactions for RNA: ENST00000493601.5

PTPRU-208, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 695 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-208ENST00000493601 AIREO43918 545 aa12.65□□□□□ -0.38
PTPRU-208ENST00000493601 FCGR3BO75015 233 aa12.65□□□□□ -0.38
PTPRU-208ENST00000493601 RBMXL2O75526 392 aaKnown RBP12.65□□□□□ -0.38
PTPRU-208ENST00000493601 TUSC2O75896 110 aa12.65□□□□□ -0.38
PTPRU-208ENST00000493601 SLC22A5O76082 557 aa12.65□□□□□ -0.38
PTPRU-208ENST00000493601 CSN3P07498 182 aa12.65□□□□□ -0.38
PTPRU-208ENST00000493601 CTXN2P0C2S0 81 aa12.65□□□□□ -0.38
PTPRU-208ENST00000493601 SAA1P0DJI8 122 aaPredicted RBP12.65□□□□□ -0.38
PTPRU-208ENST00000493601 HACD4Q5VWC8 232 aa12.65□□□□□ -0.38
PTPRU-208ENST00000493601 NR2C2APQ86WQ0 139 aa12.65□□□□□ -0.38
PTPRU-208ENST00000493601 MMD2Q8IY49 270 aa12.65□□□□□ -0.38
PTPRU-208ENST00000493601 OR2K2Q8NGT1 345 aa12.65□□□□□ -0.38
PTPRU-208ENST00000493601 DCUN1D5Q9BTE7 237 aa12.65□□□□□ -0.38
PTPRU-208ENST00000493601 TUBA4BQ9H853 241 aa12.65□□□□□ -0.38
PTPRU-208ENST00000493601 AKIP1Q9NQ31 210 aa12.65□□□□□ -0.38
PTPRU-208ENST00000493601 ADAM30Q9UKF2 790 aa12.65□□□□□ -0.38
PTPRU-208ENST00000493601 OR2W1Q9Y3N9 320 aa12.65□□□□□ -0.38
PTPRU-208ENST00000493601 SCGNO76038 276 aa12.64□□□□□ -0.39
PTPRU-208ENST00000493601 GABARAPL2P60520 117 aa12.64□□□□□ -0.39
PTPRU-208ENST00000493601 ATP5G2Q06055 141 aa12.64□□□□□ -0.39
PTPRU-208ENST00000493601 CDNFQ49AH0 187 aa12.64□□□□□ -0.39
PTPRU-208ENST00000493601 FAM209BQ5JX69 171 aa12.64□□□□□ -0.39
PTPRU-208ENST00000493601 NECAP1Q8NC96 275 aa12.64□□□□□ -0.39
PTPRU-208ENST00000493601 THAP7Q9BT49 309 aaPredicted RBP12.64□□□□□ -0.39
PTPRU-208ENST00000493601 ST6GALNAC5Q9BVH7 336 aa12.64□□□□□ -0.39
PTPRU-208ENST00000493601 DCSTAMPQ9H295 470 aa12.64□□□□□ -0.39
PTPRU-208ENST00000493601 ELF5Q9UKW6 265 aaPredicted RBP12.64□□□□□ -0.39
PTPRU-208ENST00000493601 TENM2Q9NT68 2774 aa12.64□□□□□ -0.39
PTPRU-208ENST00000493601 TRBV9A0A0B4J1U6 114 aa12.63□□□□□ -0.39
PTPRU-208ENST00000493601 SMIM30A4D0T7 59 aa12.63□□□□□ -0.39
PTPRU-208ENST00000493601 NOTOA8MTQ0 251 aa12.63□□□□□ -0.39
PTPRU-208ENST00000493601 BMPR1BO00238 502 aa12.63□□□□□ -0.39
PTPRU-208ENST00000493601 MRPS14O60783 128 aaKnown RBP12.63□□□□□ -0.39
PTPRU-208ENST00000493601 HLA-DQB1P01920 261 aa12.63□□□□□ -0.39
PTPRU-208ENST00000493601 PRH1P02810 166 aa12.63□□□□□ -0.39
PTPRU-208ENST00000493601 SLC25A42Q86VD7 318 aa12.63□□□□□ -0.39
PTPRU-208ENST00000493601 OR4S2Q8NH73 311 aa12.63□□□□□ -0.39
PTPRU-208ENST00000493601 EDA2RQ9HAV5 297 aa12.63□□□□□ -0.39
PTPRU-208ENST00000493601 RBMX2Q9Y388 322 aaKnown RBP12.63□□□□□ -0.39
PTPRU-208ENST00000493601 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.62□□□□□ -0.39
PTPRU-208ENST00000493601 TMEM235A6NFC5 223 aa12.62□□□□□ -0.39
PTPRU-208ENST00000493601 J3QRK9 145 aa12.62□□□□□ -0.39
PTPRU-208ENST00000493601 NFYAP23511 347 aaPredicted RBP12.62□□□□□ -0.39
PTPRU-208ENST00000493601 FGF9P31371 208 aaPredicted RBP12.62□□□□□ -0.39
PTPRU-208ENST00000493601 GNG2P59768 71 aa12.62□□□□□ -0.39
PTPRU-208ENST00000493601 ZNF45Q02386 682 aa12.62□□□□□ -0.39
PTPRU-208ENST00000493601 HAGHQ16775 308 aa12.62□□□□□ -0.39
PTPRU-208ENST00000493601 OR2B11Q5JQS5 317 aa12.62□□□□□ -0.39
PTPRU-208ENST00000493601 C10orf55Q5SWW7 151 aa12.62□□□□□ -0.39
PTPRU-208ENST00000493601 ZFAND6Q6FIF0 208 aa12.62□□□□□ -0.39
PTPRU-208ENST00000493601 CNIH2Q6PI25 160 aa12.62□□□□□ -0.39
PTPRU-208ENST00000493601 LAX1Q8IWV1 398 aa12.62□□□□□ -0.39
PTPRU-208ENST00000493601 TTC9CQ8N5M4 171 aa12.62□□□□□ -0.39
PTPRU-208ENST00000493601 VSTM2AQ8TAG5 236 aa12.62□□□□□ -0.39
PTPRU-208ENST00000493601 NUDCD2Q8WVJ2 157 aa12.62□□□□□ -0.39
PTPRU-208ENST00000493601 HSD17B10Q99714 261 aaKnown RBP12.62□□□□□ -0.39
PTPRU-208ENST00000493601 RAB26Q9ULW5 256 aa12.62□□□□□ -0.39
PTPRU-208ENST00000493601 ZNF257Q9Y2Q1 563 aa12.62□□□□□ -0.39
PTPRU-208ENST00000493601 DYNC2H1Q8NCM8 4307 aaKnown RBP12.62□□□□□ -0.39
PTPRU-208ENST00000493601 LCE6AA0A183 80 aa12.61□□□□□ -0.39
PTPRU-208ENST00000493601 IZUMO1RA6ND01 250 aa12.61□□□□□ -0.39
PTPRU-208ENST00000493601 KBTBD11O94819 623 aa12.61□□□□□ -0.39
PTPRU-208ENST00000493601 IFNA6P05013 189 aa12.61□□□□□ -0.39
PTPRU-208ENST00000493601 C15orf32Q32M92 178 aa12.61□□□□□ -0.39
PTPRU-208ENST00000493601 UBE2UQ5VVX9 321 aa12.61□□□□□ -0.39
PTPRU-208ENST00000493601 TPRA1Q86W33 373 aa12.61□□□□□ -0.39
PTPRU-208ENST00000493601 TCTEX1D2Q8WW35 142 aa12.61□□□□□ -0.39
PTPRU-208ENST00000493601 KCTD12Q96CX2 325 aaKnown RBP12.61□□□□□ -0.39
PTPRU-208ENST00000493601 TXNL4BQ9NX01 149 aaKnown RBP12.61□□□□□ -0.39
PTPRU-208ENST00000493601 CSMD3Q7Z407 3707 aa12.6□□□□□ -0.39
PTPRU-208ENST00000493601 IGKV1D-13A0A0B4J2D9 117 aa12.6□□□□□ -0.39
PTPRU-208ENST00000493601 IGLV2-14P01704 120 aa12.6□□□□□ -0.39
PTPRU-208ENST00000493601 IGKV1-13P0DP09 117 aa12.6□□□□□ -0.39
PTPRU-208ENST00000493601 PSMB9P28065 219 aa12.6□□□□□ -0.39
PTPRU-208ENST00000493601 MECP2P51608 486 aaKnown RBP12.6□□□□□ -0.39
PTPRU-208ENST00000493601 RPL30P62888 115 aaKnown RBP12.6□□□□□ -0.39
PTPRU-208ENST00000493601 VKORC1L1Q8N0U8 176 aa12.6□□□□□ -0.39
PTPRU-208ENST00000493601 DYNLRB2Q8TF09 96 aa12.6□□□□□ -0.39
PTPRU-208ENST00000493601 FCGR1BQ92637 280 aa12.6□□□□□ -0.39
PTPRU-208ENST00000493601 OR51E2Q9H255 320 aa12.6□□□□□ -0.39
PTPRU-208ENST00000493601 DAPK2Q9UIK4 370 aa12.6□□□□□ -0.39
PTPRU-208ENST00000493601 ANXA10Q9UJ72 324 aa12.6□□□□□ -0.39
PTPRU-208ENST00000493601 DPPA5A6NC42 116 aa12.59□□□□□ -0.39
PTPRU-208ENST00000493601 NPIPB5A8MRT5 1133 aa12.59□□□□□ -0.39
PTPRU-208ENST00000493601 OR2J3O76001 311 aa12.59□□□□□ -0.39
PTPRU-208ENST00000493601 TPPPO94811 219 aa12.59□□□□□ -0.39
PTPRU-208ENST00000493601 MAS1LP35410 378 aa12.59□□□□□ -0.39
PTPRU-208ENST00000493601 CD81P60033 236 aa12.59□□□□□ -0.39
PTPRU-208ENST00000493601 CD300EQ496F6 205 aaPredicted RBP12.59□□□□□ -0.39
PTPRU-208ENST00000493601 SFXN4Q6P4A7 337 aa12.59□□□□□ -0.39
PTPRU-208ENST00000493601 LGALS14Q8TCE9 139 aa12.59□□□□□ -0.39
PTPRU-208ENST00000493601 OR2A7Q96R45 310 aa12.59□□□□□ -0.39
PTPRU-208ENST00000493601 SLC2A8Q9NY64 477 aa12.59□□□□□ -0.39
PTPRU-208ENST00000493601 SPATA2Q9UM82 520 aa12.59□□□□□ -0.39
PTPRU-208ENST00000493601 RYR2Q92736 4967 aa12.58□□□□□ -0.4
PTPRU-208ENST00000493601 HMX3A6NHT5 357 aa12.58□□□□□ -0.4
PTPRU-208ENST00000493601 TEX22C9J3V5 150 aa12.58□□□□□ -0.4
PTPRU-208ENST00000493601 GGCTO75223 188 aaKnown RBP12.58□□□□□ -0.4
PTPRU-208ENST00000493601 DHFRP00374 187 aa12.58□□□□□ -0.4
PTPRU-208ENST00000493601 RPL27AP46776 148 aaKnown RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms