RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 AP4M1O00189 453 aa9.14□□□□□ -0.95
CTSA-209ENST00000493522 RAMP3O60896 148 aa9.14□□□□□ -0.95
CTSA-209ENST00000493522 FBXO24O75426 580 aa9.14□□□□□ -0.95
CTSA-209ENST00000493522 CA2P00918 260 aa9.14□□□□□ -0.95
CTSA-209ENST00000493522 IGLV2-23P01705 113 aa9.14□□□□□ -0.95
CTSA-209ENST00000493522 ZNF735P0CB33 412 aa9.14□□□□□ -0.95
CTSA-209ENST00000493522 LGALS7P47929 136 aa9.14□□□□□ -0.95
CTSA-209ENST00000493522 UCP3P55916 312 aa9.14□□□□□ -0.95
CTSA-209ENST00000493522 KLF9Q13886 244 aaPredicted RBP9.14□□□□□ -0.95
CTSA-209ENST00000493522 DMRTA1Q5VZB9 504 aa9.14□□□□□ -0.95
CTSA-209ENST00000493522 LIN54Q6MZP7 749 aa9.14□□□□□ -0.95
CTSA-209ENST00000493522 CENPVQ7Z7K6 275 aaPredicted RBP9.14□□□□□ -0.95
CTSA-209ENST00000493522 GDPD1Q8N9F7 314 aa9.14□□□□□ -0.95
CTSA-209ENST00000493522 OR51S1Q8NGJ8 323 aa9.14□□□□□ -0.95
CTSA-209ENST00000493522 OR13C8Q8NGS7 320 aa9.14□□□□□ -0.95
CTSA-209ENST00000493522 MARCH1Q8TCQ1 289 aa9.14□□□□□ -0.95
CTSA-209ENST00000493522 PRRT1Q99946 306 aa9.14□□□□□ -0.95
CTSA-209ENST00000493522 WNT10AQ9GZT5 417 aa9.14□□□□□ -0.95
CTSA-209ENST00000493522 SLC2A9Q9NRM0 540 aa9.14□□□□□ -0.95
CTSA-209ENST00000493522 KMT2CQ8NEZ4 4911 aaKnown RBP9.14□□□□□ -0.95
CTSA-209ENST00000493522 IGHV7-81A0A0B4J1V7 117 aa9.13□□□□□ -0.95
CTSA-209ENST00000493522 LINC01548A6NM66 108 aa9.13□□□□□ -0.95
CTSA-209ENST00000493522 ATP6V0E1O15342 81 aa9.13□□□□□ -0.95
CTSA-209ENST00000493522 RBFOX2O43251 390 aaKnown RBP eCLIP9.13□□□□□ -0.95
CTSA-209ENST00000493522 PGLYRP1O75594 196 aaPredicted RBP9.13□□□□□ -0.95
CTSA-209ENST00000493522 SAA1P0DJI8 122 aaPredicted RBP9.13□□□□□ -0.95
CTSA-209ENST00000493522 PI3P19957 117 aa9.13□□□□□ -0.95
CTSA-209ENST00000493522 ECI1P42126 302 aa9.13□□□□□ -0.95
CTSA-209ENST00000493522 UBE2KP61086 200 aa9.13□□□□□ -0.95
CTSA-209ENST00000493522 GNB1P62873 340 aa9.13□□□□□ -0.95
CTSA-209ENST00000493522 NDPQ00604 133 aa9.13□□□□□ -0.95
CTSA-209ENST00000493522 ZNF45Q02386 682 aa9.13□□□□□ -0.95
CTSA-209ENST00000493522 ECSCRQ19T08 205 aa9.13□□□□□ -0.95
CTSA-209ENST00000493522 HIST2H2BDQ6DRA6 164 aa9.13□□□□□ -0.95
CTSA-209ENST00000493522 IDO2Q6ZQW0 420 aa9.13□□□□□ -0.95
CTSA-209ENST00000493522 TBC1D26Q86UD7 250 aa9.13□□□□□ -0.95
CTSA-209ENST00000493522 STPG2Q8N412 459 aa9.13□□□□□ -0.95
CTSA-209ENST00000493522 CCDC71LQ8N9Z2 235 aa9.13□□□□□ -0.95
CTSA-209ENST00000493522 OR5AU1Q8NGC0 362 aa9.13□□□□□ -0.95
CTSA-209ENST00000493522 OR4X2Q8NGF9 303 aa9.13□□□□□ -0.95
CTSA-209ENST00000493522 TERB2Q8NHR7 220 aa9.13□□□□□ -0.95
CTSA-209ENST00000493522 ZFAND1Q8TCF1 268 aa9.13□□□□□ -0.95
CTSA-209ENST00000493522 CHPT1Q8WUD6 406 aa9.13□□□□□ -0.95
CTSA-209ENST00000493522 ZNF486Q96H40 463 aaPredicted RBP9.13□□□□□ -0.95
CTSA-209ENST00000493522 OR51J1Q9H342 316 aa9.13□□□□□ -0.95
CTSA-209ENST00000493522 SCP2D1Q9UJQ7 156 aa9.13□□□□□ -0.95
CTSA-209ENST00000493522 C14orf166Q9Y224 244 aaKnown RBP9.13□□□□□ -0.95
CTSA-209ENST00000493522 SRRM4A7MD48 611 aaKnown RBP9.12□□□□□ -0.95
CTSA-209ENST00000493522 FCN1O00602 326 aa9.12□□□□□ -0.95
CTSA-209ENST00000493522 CREBL2O60519 120 aaPredicted RBP9.12□□□□□ -0.95
CTSA-209ENST00000493522 S1PR2O95136 353 aa9.12□□□□□ -0.95
CTSA-209ENST00000493522 HRASP01112 189 aa9.12□□□□□ -0.95
CTSA-209ENST00000493522 CD28P10747 220 aa9.12□□□□□ -0.95
CTSA-209ENST00000493522 VDAC1P21796 283 aa9.12□□□□□ -0.95
CTSA-209ENST00000493522 F2RP25116 425 aa9.12□□□□□ -0.95
CTSA-209ENST00000493522 PIGPP57054 158 aa9.12□□□□□ -0.95
CTSA-209ENST00000493522 BRWD1-AS2P59051 145 aa9.12□□□□□ -0.95
CTSA-209ENST00000493522 SLC35B1P78383 322 aa9.12□□□□□ -0.95
CTSA-209ENST00000493522 KHDC1LQ5JSQ8 128 aa9.12□□□□□ -0.95
CTSA-209ENST00000493522 C10orf99Q6UWK7 81 aa9.12□□□□□ -0.95
CTSA-209ENST00000493522 SSX9Q7RTT3 188 aa9.12□□□□□ -0.95
CTSA-209ENST00000493522 PPP1R27Q86WC6 154 aa9.12□□□□□ -0.95
CTSA-209ENST00000493522 VKORC1L1Q8N0U8 176 aa9.12□□□□□ -0.95
CTSA-209ENST00000493522 GRPEL2Q8TAA5 225 aa9.12□□□□□ -0.95
CTSA-209ENST00000493522 CD300LFQ8TDQ1 290 aa9.12□□□□□ -0.95
CTSA-209ENST00000493522 ARPC1AQ92747 370 aa9.12□□□□□ -0.95
CTSA-209ENST00000493522 MRGPRFQ96AM1 343 aa9.12□□□□□ -0.95
CTSA-209ENST00000493522 HRASLSQ9HDD0 168 aa9.12□□□□□ -0.95
CTSA-209ENST00000493522 AKIP1Q9NQ31 210 aa9.12□□□□□ -0.95
CTSA-209ENST00000493522 SLC2A8Q9NY64 477 aa9.12□□□□□ -0.95
CTSA-209ENST00000493522 COPZ2Q9P299 210 aa9.12□□□□□ -0.95
CTSA-209ENST00000493522 DNAH3Q8TD57 4116 aa9.12□□□□□ -0.95
CTSA-209ENST00000493522 LINC00854A0A1B0GVQ3 168 aa9.11□□□□□ -0.95
CTSA-209ENST00000493522 CNIH1O95406 144 aa9.11□□□□□ -0.95
CTSA-209ENST00000493522 HPRT1P00492 218 aa9.11□□□□□ -0.95
CTSA-209ENST00000493522 CRYGBP07316 175 aa9.11□□□□□ -0.95
CTSA-209ENST00000493522 CTSDP07339 412 aaPredicted RBP9.11□□□□□ -0.95
CTSA-209ENST00000493522 LPAR6P43657 344 aa9.11□□□□□ -0.95
CTSA-209ENST00000493522 ERVK-16P61578 105 aa9.11□□□□□ -0.95
CTSA-209ENST00000493522 RND3P61587 244 aa9.11□□□□□ -0.95
CTSA-209ENST00000493522 CX3CL1P78423 397 aa9.11□□□□□ -0.95
CTSA-209ENST00000493522 PJVKQ0ZLH3 352 aa9.11□□□□□ -0.95
CTSA-209ENST00000493522 SURF2Q15527 256 aaPredicted RBP9.11□□□□□ -0.95
CTSA-209ENST00000493522 TNXAQ16473 311 aa9.11□□□□□ -0.95
CTSA-209ENST00000493522 BAK1Q16611 211 aa9.11□□□□□ -0.95
CTSA-209ENST00000493522 ZNF329Q86UD4 541 aa9.11□□□□□ -0.95
CTSA-209ENST00000493522 TCTEX1D1Q8N7M0 179 aa9.11□□□□□ -0.95
CTSA-209ENST00000493522 TEX45Q8NA69 505 aa9.11□□□□□ -0.95
CTSA-209ENST00000493522 VSTM2AQ8TAG5 236 aa9.11□□□□□ -0.95
CTSA-209ENST00000493522 WIPF2Q8TF74 440 aaPredicted RBP9.11□□□□□ -0.95
CTSA-209ENST00000493522 S100ZQ8WXG8 99 aa9.11□□□□□ -0.95
CTSA-209ENST00000493522 R3HDM4Q96D70 268 aa9.11□□□□□ -0.95
CTSA-209ENST00000493522 RHOVQ96L33 236 aa9.11□□□□□ -0.95
CTSA-209ENST00000493522 SDHCQ99643 169 aaPredicted RBP9.11□□□□□ -0.95
CTSA-209ENST00000493522 FAM103A1Q9BTL3 118 aaKnown RBP9.11□□□□□ -0.95
CTSA-209ENST00000493522 GON7Q9BXV9 100 aa9.11□□□□□ -0.95
CTSA-209ENST00000493522 COMMD9Q9P000 198 aa9.11□□□□□ -0.95
CTSA-209ENST00000493522 FBXO7Q9Y3I1 522 aa9.11□□□□□ -0.95
CTSA-209ENST00000493522 WSB1Q9Y6I7 421 aa9.11□□□□□ -0.95
CTSA-209ENST00000493522 TRAV41A0A0B4J266 112 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms