RNA–Protein interactions for RNA: ENST00000493455.6

HPS4-216, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 986 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-216ENST00000493455 C11orf88Q6PI97 169 aa12.55□□□□□ -0.4
HPS4-216ENST00000493455 PLET1Q6UQ28 207 aa12.55□□□□□ -0.4
HPS4-216ENST00000493455 SLC25A42Q86VD7 318 aa12.55□□□□□ -0.4
HPS4-216ENST00000493455 TPSG1Q9NRR2 321 aa12.55□□□□□ -0.4
HPS4-216ENST00000493455 RRHO14718 337 aa12.54□□□□□ -0.4
HPS4-216ENST00000493455 RBFOX2O43251 390 aaKnown RBP eCLIP12.54□□□□□ -0.4
HPS4-216ENST00000493455 HRASP01112 189 aa12.54□□□□□ -0.4
HPS4-216ENST00000493455 KRASP01116 189 aa12.54□□□□□ -0.4
HPS4-216ENST00000493455 IGLV2-23P01705 113 aa12.54□□□□□ -0.4
HPS4-216ENST00000493455 HLA-AP01891 365 aaKnown RBP12.54□□□□□ -0.4
HPS4-216ENST00000493455 OR4E1P0C645 316 aa12.54□□□□□ -0.4
HPS4-216ENST00000493455 SAA1P0DJI8 122 aaPredicted RBP12.54□□□□□ -0.4
HPS4-216ENST00000493455 ANXA3P12429 323 aa12.54□□□□□ -0.4
HPS4-216ENST00000493455 LGALS7P47929 136 aa12.54□□□□□ -0.4
HPS4-216ENST00000493455 AKR1C2P52895 323 aa12.54□□□□□ -0.4
HPS4-216ENST00000493455 GNB1P62873 340 aa12.54□□□□□ -0.4
HPS4-216ENST00000493455 BLCAPP62952 87 aa12.54□□□□□ -0.4
HPS4-216ENST00000493455 SUPT4H1P63272 117 aaKnown RBP12.54□□□□□ -0.4
HPS4-216ENST00000493455 C16orf82Q7Z2V1 217 aa12.54□□□□□ -0.4
HPS4-216ENST00000493455 ZNF695Q8IW36 515 aa12.54□□□□□ -0.4
HPS4-216ENST00000493455 TCTEX1D1Q8N7M0 179 aa12.54□□□□□ -0.4
HPS4-216ENST00000493455 C5orf56Q8N8D9 126 aa12.54□□□□□ -0.4
HPS4-216ENST00000493455 Q8N9W7 124 aa12.54□□□□□ -0.4
HPS4-216ENST00000493455 OR52B4Q8NGK2 314 aa12.54□□□□□ -0.4
HPS4-216ENST00000493455 NPFFR1Q9GZQ6 430 aa12.54□□□□□ -0.4
HPS4-216ENST00000493455 PLSCR3Q9NRY6 295 aa12.54□□□□□ -0.4
HPS4-216ENST00000493455 NIPBLQ6KC79 2804 aaeCLIP12.53□□□□□ -0.4
HPS4-216ENST00000493455 SFT2D2O95562 160 aa12.53□□□□□ -0.4
HPS4-216ENST00000493455 NQO2P16083 231 aa12.53□□□□□ -0.4
HPS4-216ENST00000493455 DHODHQ02127 395 aa12.53□□□□□ -0.4
HPS4-216ENST00000493455 C5orf64Q2M2E5 130 aa12.53□□□□□ -0.4
HPS4-216ENST00000493455 RGS21Q2M5E4 152 aa12.53□□□□□ -0.4
HPS4-216ENST00000493455 TMEM268Q5VZI3 342 aa12.53□□□□□ -0.4
HPS4-216ENST00000493455 LIN54Q6MZP7 749 aa12.53□□□□□ -0.4
HPS4-216ENST00000493455 NPBQ8NG41 125 aa12.53□□□□□ -0.4
HPS4-216ENST00000493455 OR8H1Q8NGG4 311 aa12.53□□□□□ -0.4
HPS4-216ENST00000493455 ABHD5Q8WTS1 349 aa12.53□□□□□ -0.4
HPS4-216ENST00000493455 RHOVQ96L33 236 aa12.53□□□□□ -0.4
HPS4-216ENST00000493455 RNF5Q99942 180 aa12.53□□□□□ -0.4
HPS4-216ENST00000493455 SEC22CQ9BRL7 303 aa12.53□□□□□ -0.4
HPS4-216ENST00000493455 TMEM222Q9H0R3 208 aa12.53□□□□□ -0.4
HPS4-216ENST00000493455 PLEKHA2Q9HB19 425 aa12.53□□□□□ -0.4
HPS4-216ENST00000493455 COMMD9Q9P000 198 aa12.53□□□□□ -0.4
HPS4-216ENST00000493455 MARCH11A6NNE9 402 aa12.52□□□□□ -0.41
HPS4-216ENST00000493455 INMT-MINDY4F8WBC2 141 aa12.52□□□□□ -0.41
HPS4-216ENST00000493455 M0QZK8 103 aa12.52□□□□□ -0.41
HPS4-216ENST00000493455 FGF16O43320 207 aa12.52□□□□□ -0.41
HPS4-216ENST00000493455 NDUFA3O95167 84 aa12.52□□□□□ -0.41
HPS4-216ENST00000493455 SPDEFO95238 335 aa12.52□□□□□ -0.41
HPS4-216ENST00000493455 PTTG1O95997 202 aa12.52□□□□□ -0.41
HPS4-216ENST00000493455 IGKV1-39P01597 117 aa12.52□□□□□ -0.41
HPS4-216ENST00000493455 IGKV1D-39P04432 117 aa12.52□□□□□ -0.41
HPS4-216ENST00000493455 UCP1P25874 307 aa12.52□□□□□ -0.41
HPS4-216ENST00000493455 UBE2MP61081 183 aaKnown RBP12.52□□□□□ -0.41
HPS4-216ENST00000493455 TMEM187Q14656 261 aa12.52□□□□□ -0.41
HPS4-216ENST00000493455 TMEM95Q3KNT9 176 aa12.52□□□□□ -0.41
HPS4-216ENST00000493455 Q6ZS46 218 aa12.52□□□□□ -0.41
HPS4-216ENST00000493455 FAM71E2Q8N5Q1 922 aa12.52□□□□□ -0.41
HPS4-216ENST00000493455 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.52□□□□□ -0.41
HPS4-216ENST00000493455 DUSP18Q8NEJ0 188 aa12.52□□□□□ -0.41
HPS4-216ENST00000493455 LHFPL5Q8TAF8 219 aa12.52□□□□□ -0.41
HPS4-216ENST00000493455 GLYATL2Q8WU03 294 aa12.52□□□□□ -0.41
HPS4-216ENST00000493455 RANBP3Q9H6Z4 567 aaPredicted RBP12.52□□□□□ -0.41
HPS4-216ENST00000493455 TMEM140Q9NV12 185 aa12.52□□□□□ -0.41
HPS4-216ENST00000493455 C9orf170A2RU37 121 aa12.51□□□□□ -0.41
HPS4-216ENST00000493455 FCN1O00602 326 aa12.51□□□□□ -0.41
HPS4-216ENST00000493455 B3GALNT1O75752 331 aa12.51□□□□□ -0.41
HPS4-216ENST00000493455 CA2P00918 260 aa12.51□□□□□ -0.41
HPS4-216ENST00000493455 AMY1AP04745 511 aa12.51□□□□□ -0.41
HPS4-216ENST00000493455 UBE2KP61086 200 aa12.51□□□□□ -0.41
HPS4-216ENST00000493455 PJVKQ0ZLH3 352 aa12.51□□□□□ -0.41
HPS4-216ENST00000493455 DHRS2Q13268 280 aa12.51□□□□□ -0.41
HPS4-216ENST00000493455 TNXAQ16473 311 aa12.51□□□□□ -0.41
HPS4-216ENST00000493455 ANKRD55Q3KP44 614 aa12.51□□□□□ -0.41
HPS4-216ENST00000493455 OR4A47Q6IF82 309 aa12.51□□□□□ -0.41
HPS4-216ENST00000493455 H2BFWTQ7Z2G1 175 aa12.51□□□□□ -0.41
HPS4-216ENST00000493455 LYG2Q86SG7 212 aa12.51□□□□□ -0.41
HPS4-216ENST00000493455 SELENOHQ8IZQ5 122 aaKnown RBP12.51□□□□□ -0.41
HPS4-216ENST00000493455 UXS1Q8NBZ7 420 aa12.51□□□□□ -0.41
HPS4-216ENST00000493455 GALNT14Q96FL9 552 aa12.51□□□□□ -0.41
HPS4-216ENST00000493455 HSPB9Q9BQS6 159 aa12.51□□□□□ -0.41
HPS4-216ENST00000493455 PRSS22Q9GZN4 317 aa12.51□□□□□ -0.41
HPS4-216ENST00000493455 NSG2Q9Y328 171 aa12.51□□□□□ -0.41
HPS4-216ENST00000493455 SIGLEC9Q9Y336 463 aa12.51□□□□□ -0.41
HPS4-216ENST00000493455 CUBNO60494 3623 aa12.51□□□□□ -0.41
HPS4-216ENST00000493455 PLXNB1O43157 2135 aa12.5□□□□□ -0.41
HPS4-216ENST00000493455 JMJD1CQ15652 2540 aa12.5□□□□□ -0.41
HPS4-216ENST00000493455 TRAV3A0A0B4J244 114 aa12.5□□□□□ -0.41
HPS4-216ENST00000493455 KBTBD11O94819 623 aa12.5□□□□□ -0.41
HPS4-216ENST00000493455 OR2A4O95047 310 aa12.5□□□□□ -0.41
HPS4-216ENST00000493455 IZUMO4Q1ZYL8 232 aa12.5□□□□□ -0.41
HPS4-216ENST00000493455 Q6ZSV7 163 aa12.5□□□□□ -0.41
HPS4-216ENST00000493455 PPP1R27Q86WC6 154 aa12.5□□□□□ -0.41
HPS4-216ENST00000493455 LGI3Q8N145 548 aa12.5□□□□□ -0.41
HPS4-216ENST00000493455 SLC35G3Q8N808 338 aa12.5□□□□□ -0.41
HPS4-216ENST00000493455 TEX45Q8NA69 505 aa12.5□□□□□ -0.41
HPS4-216ENST00000493455 VSTM2AQ8TAG5 236 aa12.5□□□□□ -0.41
HPS4-216ENST00000493455 RBPMSQ93062 196 aaKnown RBP12.5□□□□□ -0.41
HPS4-216ENST00000493455 OR2A7Q96R45 310 aa12.5□□□□□ -0.41
HPS4-216ENST00000493455 AIFM2Q9BRQ8 373 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms