RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 RAB6AP20340 208 aa6.76□□□□□ -1.33
HDAC3-211ENST00000491581 GADD45AP24522 165 aa6.76□□□□□ -1.33
HDAC3-211ENST00000491581 PSMA1P25786 263 aaKnown RBP6.76□□□□□ -1.33
HDAC3-211ENST00000491581 SDC2P34741 201 aa6.76□□□□□ -1.33
HDAC3-211ENST00000491581 TALDO1P37837 337 aa6.76□□□□□ -1.33
HDAC3-211ENST00000491581 INSL3P51460 131 aa6.76□□□□□ -1.33
HDAC3-211ENST00000491581 MRPS15P82914 257 aaKnown RBP6.76□□□□□ -1.33
HDAC3-211ENST00000491581 RHOGP84095 191 aa6.76□□□□□ -1.33
HDAC3-211ENST00000491581 EIF4EBP1Q13541 118 aaPredicted RBP6.76□□□□□ -1.33
HDAC3-211ENST00000491581 ZNF343Q6P1L6 599 aa6.76□□□□□ -1.33
HDAC3-211ENST00000491581 ZNF773Q6PK81 442 aa6.76□□□□□ -1.33
HDAC3-211ENST00000491581 SSX9Q7RTT3 188 aa6.76□□□□□ -1.33
HDAC3-211ENST00000491581 ANKRD13BQ86YJ7 626 aa6.76□□□□□ -1.33
HDAC3-211ENST00000491581 TCTEX1D1Q8N7M0 179 aa6.76□□□□□ -1.33
HDAC3-211ENST00000491581 OR9G4Q8NGQ1 327 aa6.76□□□□□ -1.33
HDAC3-211ENST00000491581 OR6Q1Q8NGQ2 317 aa6.76□□□□□ -1.33
HDAC3-211ENST00000491581 MUC7Q8TAX7 377 aa6.76□□□□□ -1.33
HDAC3-211ENST00000491581 SLC25A38Q96DW6 304 aa6.76□□□□□ -1.33
HDAC3-211ENST00000491581 RNF5Q99942 180 aa6.76□□□□□ -1.33
HDAC3-211ENST00000491581 THAP7Q9BT49 309 aaPredicted RBP6.76□□□□□ -1.33
HDAC3-211ENST00000491581 DCUN1D5Q9BTE7 237 aa6.76□□□□□ -1.33
HDAC3-211ENST00000491581 SLA2Q9H6Q3 261 aa6.76□□□□□ -1.33
HDAC3-211ENST00000491581 PLEKHA3Q9HB20 300 aa6.76□□□□□ -1.33
HDAC3-211ENST00000491581 CCL28Q9NRJ3 127 aa6.76□□□□□ -1.33
HDAC3-211ENST00000491581 C19orf73Q9NVV2 129 aa6.76□□□□□ -1.33
HDAC3-211ENST00000491581 TAS2R8Q9NYW2 309 aa6.76□□□□□ -1.33
HDAC3-211ENST00000491581 PEF1Q9UBV8 284 aaKnown RBP6.76□□□□□ -1.33
HDAC3-211ENST00000491581 RRP15Q9Y3B9 282 aaKnown RBP6.76□□□□□ -1.33
HDAC3-211ENST00000491581 DMRT1Q9Y5R6 373 aa6.76□□□□□ -1.33
HDAC3-211ENST00000491581 HYDINQ4G0P3 5121 aa6.76□□□□□ -1.33
HDAC3-211ENST00000491581 TNCP24821 2201 aa6.75□□□□□ -1.33
HDAC3-211ENST00000491581 TEX22C9J3V5 150 aa6.75□□□□□ -1.33
HDAC3-211ENST00000491581 PDCD5O14737 125 aa6.75□□□□□ -1.33
HDAC3-211ENST00000491581 MPPED1O15442 326 aa6.75□□□□□ -1.33
HDAC3-211ENST00000491581 NDUFB8O95169 186 aa6.75□□□□□ -1.33
HDAC3-211ENST00000491581 IL6RP08887 468 aaPredicted RBP6.75□□□□□ -1.33
HDAC3-211ENST00000491581 CD7P09564 240 aa6.75□□□□□ -1.33
HDAC3-211ENST00000491581 AREGP15514 252 aa6.75□□□□□ -1.33
HDAC3-211ENST00000491581 AADACP22760 399 aa6.75□□□□□ -1.33
HDAC3-211ENST00000491581 SERPINB10P48595 397 aa6.75□□□□□ -1.33
HDAC3-211ENST00000491581 UBE2KP61086 200 aa6.75□□□□□ -1.33
HDAC3-211ENST00000491581 EXOSC2Q13868 293 aaKnown RBP6.75□□□□□ -1.33
HDAC3-211ENST00000491581 RTL8BQ17RB0 113 aa6.75□□□□□ -1.33
HDAC3-211ENST00000491581 UBE2UQ5VVX9 321 aa6.75□□□□□ -1.33
HDAC3-211ENST00000491581 PYHIN1Q6K0P9 492 aa6.75□□□□□ -1.33
HDAC3-211ENST00000491581 KCTD9Q7L273 389 aa6.75□□□□□ -1.33
HDAC3-211ENST00000491581 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.75□□□□□ -1.33
HDAC3-211ENST00000491581 FYTTD1Q96QD9 318 aaKnown RBP6.75□□□□□ -1.33
HDAC3-211ENST00000491581 TM2D3Q9BRN9 247 aa6.75□□□□□ -1.33
HDAC3-211ENST00000491581 CENPOQ9BU64 300 aa6.75□□□□□ -1.33
HDAC3-211ENST00000491581 RANGRFQ9HD47 186 aaPredicted RBP6.75□□□□□ -1.33
HDAC3-211ENST00000491581 MGAT4AQ9UM21 535 aa6.75□□□□□ -1.33
HDAC3-211ENST00000491581 STUB1Q9UNE7 303 aa6.75□□□□□ -1.33
HDAC3-211ENST00000491581 TENM2Q9NT68 2774 aa6.75□□□□□ -1.33
HDAC3-211ENST00000491581 CSMD3Q7Z407 3707 aa6.74□□□□□ -1.33
HDAC3-211ENST00000491581 TRAV18A0A075B6X5 111 aa6.74□□□□□ -1.33
HDAC3-211ENST00000491581 IGHV3-35A0A0C4DH35 117 aa6.74□□□□□ -1.33
HDAC3-211ENST00000491581 LOC100506127A0A0U1RQW1 187 aa6.74□□□□□ -1.33
HDAC3-211ENST00000491581 OR2C1O95371 312 aa6.74□□□□□ -1.33
HDAC3-211ENST00000491581 HLA-DQB1P01920 261 aa6.74□□□□□ -1.33
HDAC3-211ENST00000491581 OR9G9P0C7N8 305 aa6.74□□□□□ -1.33
HDAC3-211ENST00000491581 LGALS7P47929 136 aa6.74□□□□□ -1.33
HDAC3-211ENST00000491581 HSPA13P48723 471 aa6.74□□□□□ -1.33
HDAC3-211ENST00000491581 DCTN2Q13561 401 aaKnown RBP6.74□□□□□ -1.33
HDAC3-211ENST00000491581 NEDD8Q15843 81 aa6.74□□□□□ -1.33
HDAC3-211ENST00000491581 HAGHQ16775 308 aa6.74□□□□□ -1.33
HDAC3-211ENST00000491581 CD300EQ496F6 205 aaPredicted RBP6.74□□□□□ -1.33
HDAC3-211ENST00000491581 IDNKQ5T6J7 187 aa6.74□□□□□ -1.33
HDAC3-211ENST00000491581 HACD4Q5VWC8 232 aa6.74□□□□□ -1.33
HDAC3-211ENST00000491581 SFXN4Q6P4A7 337 aa6.74□□□□□ -1.33
HDAC3-211ENST00000491581 ZNF645Q8N7E2 425 aa6.74□□□□□ -1.33
HDAC3-211ENST00000491581 TCTEX1D2Q8WW35 142 aa6.74□□□□□ -1.33
HDAC3-211ENST00000491581 GHITMQ9H3K2 345 aa6.74□□□□□ -1.33
HDAC3-211ENST00000491581 EDA2RQ9HAV5 297 aa6.74□□□□□ -1.33
HDAC3-211ENST00000491581 ZMAT5Q9UDW3 170 aaKnown RBP6.74□□□□□ -1.33
HDAC3-211ENST00000491581 RAB26Q9ULW5 256 aa6.74□□□□□ -1.33
HDAC3-211ENST00000491581 RBMX2Q9Y388 322 aaKnown RBP6.74□□□□□ -1.33
HDAC3-211ENST00000491581 OR2W1Q9Y3N9 320 aa6.74□□□□□ -1.33
HDAC3-211ENST00000491581 EPPK1P58107 5090 aaKnown RBP6.73□□□□□ -1.33
HDAC3-211ENST00000491581 METTL21EPA6NDL7 271 aa6.73□□□□□ -1.33
HDAC3-211ENST00000491581 MFSD2BA6NFX1 497 aa6.73□□□□□ -1.33
HDAC3-211ENST00000491581 ZNF785A8K8V0 405 aa6.73□□□□□ -1.33
HDAC3-211ENST00000491581 NOTOA8MTQ0 251 aa6.73□□□□□ -1.33
HDAC3-211ENST00000491581 SULT1C2O00338 296 aa6.73□□□□□ -1.33
HDAC3-211ENST00000491581 LORP23490 312 aaPredicted RBP6.73□□□□□ -1.33
HDAC3-211ENST00000491581 CD40LGP29965 261 aa6.73□□□□□ -1.33
HDAC3-211ENST00000491581 MECP2P51608 486 aaKnown RBP6.73□□□□□ -1.33
HDAC3-211ENST00000491581 PSMD7P51665 324 aa6.73□□□□□ -1.33
HDAC3-211ENST00000491581 FXYD4P59646 89 aa6.73□□□□□ -1.33
HDAC3-211ENST00000491581 GNG2P59768 71 aa6.73□□□□□ -1.33
HDAC3-211ENST00000491581 GABARAPL2P60520 117 aa6.73□□□□□ -1.33
HDAC3-211ENST00000491581 CDK10Q15131 360 aa6.73□□□□□ -1.33
HDAC3-211ENST00000491581 RPEL1Q2QD12 228 aa6.73□□□□□ -1.33
HDAC3-211ENST00000491581 C15orf32Q32M92 178 aa6.73□□□□□ -1.33
HDAC3-211ENST00000491581 VMA21Q3ZAQ7 101 aa6.73□□□□□ -1.33
HDAC3-211ENST00000491581 DEFB125Q8N687 156 aa6.73□□□□□ -1.33
HDAC3-211ENST00000491581 TEX45Q8NA69 505 aa6.73□□□□□ -1.33
HDAC3-211ENST00000491581 SECTM1Q8WVN6 248 aa6.73□□□□□ -1.33
HDAC3-211ENST00000491581 SNAPC3Q92966 411 aa6.73□□□□□ -1.33
HDAC3-211ENST00000491581 WDR89Q96FK6 387 aaPredicted RBP6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms