RNA–Protein interactions for RNA: ENST00000491552.1

MSH5-SAPCD1-206, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

TSL 3

Gene MSH5-SAPCD1, Length 706 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-206ENST00000491552 GNB1P62873 340 aa12.76□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 PJVKQ0ZLH3 352 aa12.76□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 FXYD3Q14802 87 aa12.76□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 STEAP1BQ6NZ63 245 aa12.76□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 IDO2Q6ZQW0 420 aa12.76□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 CMTM1Q8IZ96 169 aa12.76□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 SPAG16Q8N0X2 631 aa12.76□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 ARRDC1Q8N5I2 433 aa12.76□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 ARPC1AQ92747 370 aa12.76□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 R3HDM4Q96D70 268 aa12.76□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 ARPC1BO15143 372 aaKnown RBP12.75□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 RBFOX2O43251 390 aaKnown RBP eCLIP12.75□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 RAMP3O60896 148 aa12.75□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 CNIH1O95406 144 aa12.75□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 RAB3DO95716 219 aa12.75□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 RLN1P04808 185 aa12.75□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 RPLP1P05386 114 aaKnown RBP12.75□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 PF4V1P10720 104 aa12.75□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 EGR2P11161 476 aaPredicted RBP12.75□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 SSBP2P81877 361 aaPredicted RBP12.75□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 TMEM267Q0VDI3 215 aaPredicted RBP12.75□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 PRSS8Q16651 343 aa12.75□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 C19orf54Q5BKX5 351 aa12.75□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 SLC38A6Q8IZM9 456 aa12.75□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 TCTEX1D1Q8N7M0 179 aa12.75□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 RNF152Q8N8N0 203 aa12.75□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 POC5Q8NA72 575 aa12.75□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 MINDY2Q8NBR6 621 aa12.75□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 OR4D10Q8NGI6 311 aa12.75□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 GRPEL2Q8TAA5 225 aa12.75□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 VSTM2AQ8TAG5 236 aa12.75□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 FAM103A1Q9BTL3 118 aaKnown RBP12.75□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 RSRP1Q9BUV0 290 aa12.75□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 ZFP57Q9NU63 452 aa12.75□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 NUBP2Q9Y5Y2 271 aa12.75□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 A0A1W2PN81 502 aa12.74□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 CREBL2O60519 120 aaPredicted RBP12.74□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 PGLYRP1O75594 196 aaPredicted RBP12.74□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 HRASP01112 189 aa12.74□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 PSMB8P28062 276 aa12.74□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 S100GP29377 79 aa12.74□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 CHRNA7P36544 502 aa12.74□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 MEF2DQ14814 521 aa12.74□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 MRGPRG-AS1Q2M3A8 158 aa12.74□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 PHLDA2Q53GA4 152 aa12.74□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 FOXB2Q5VYV0 432 aa12.74□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 UNQ5815/PRO19632Q6UWF5 114 aa12.74□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 LCNL1Q6ZST4 164 aa12.74□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 LHFPL1Q86WI0 220 aa12.74□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 VKORC1L1Q8N0U8 176 aa12.74□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 CD300LFQ8TDQ1 290 aa12.74□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 FOXA2Q9Y261 457 aaPredicted RBP12.74□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 NUDT19A8MXV4 375 aa12.73□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 HPRT1P00492 218 aa12.73□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 IGLV1-40P01703 118 aa12.73□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 PGAM2P15259 253 aa12.73□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 TNXAQ16473 311 aa12.73□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 AKIRIN2Q53H80 203 aa12.73□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 CCDC190Q86UF4 302 aa12.73□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 PUSL1Q8N0Z8 303 aaKnown RBP12.73□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 LFNGQ8NES3 379 aa12.73□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 AIFM2Q9BRQ8 373 aa12.73□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 ZNF430Q9H8G1 570 aaPredicted RBP12.73□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 V9GYH0 126 aa12.73□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 TRRAPQ9Y4A5 3859 aa12.72□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 ANKRD20A5PA0PJZ0 165 aa12.72□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 KBTBD11O94819 623 aa12.72□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 OR2A4O95047 310 aa12.72□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 AKAIN1P0CW23 69 aa12.72□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 F2RP25116 425 aa12.72□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 SLC6A1P30531 599 aa12.72□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 PPP5CP53041 499 aa12.72□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 TAS2R31P59538 309 aa12.72□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 SCGB2B2Q4G0G5 96 aa12.72□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 PYDC2Q56P42 97 aa12.72□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 FAAP20Q6NZ36 180 aa12.72□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 TMEM65Q6PI78 240 aa12.72□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 C18orf65Q6ZTR6 163 aa12.72□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 SSX9Q7RTT3 188 aa12.72□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 MMD2Q8IY49 270 aa12.72□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 KLHL30-AS1Q8NEE0 82 aa12.72□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 OR4C16Q8NGL9 310 aa12.72□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 RHOVQ96L33 236 aa12.72□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 OR2A7Q96R45 310 aa12.72□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 PLEKHA2Q9HB19 425 aa12.72□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 COMMD9Q9P000 198 aa12.72□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 DISC1C4P0D8 188 aa12.71□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 SOX15O60248 233 aa12.71□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 ACTL6BO94805 426 aa12.71□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 S1PR2O95136 353 aa12.71□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 PF4P02776 101 aa12.71□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 ZNF735P0CB33 412 aa12.71□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 NQO2P16083 231 aa12.71□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 PTBP1P26599 531 aaKnown RBP eCLIP12.71□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 SPANXN2Q5MJ10 180 aa12.71□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 TBC1D26Q86UD7 250 aa12.71□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 ZNF695Q8IW36 515 aa12.71□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 OR5M8Q8NGP6 311 aa12.71□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 OR6Q1Q8NGQ2 317 aa12.71□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 TERB2Q8NHR7 220 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms