RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 ERVK11-1P61568 191 aa18.83■□□□□ 0.6
USF3-203ENST00000491165 Q8IYB0 196 aa18.83■□□□□ 0.6
USF3-203ENST00000491165 PSMG3Q9BT73 122 aaPredicted RBP18.83■□□□□ 0.6
USF3-203ENST00000491165 RPRMQ9NS64 109 aa18.83■□□□□ 0.6
USF3-203ENST00000491165 METTL15P1P0C7V9 234 aa18.82■□□□□ 0.6
USF3-203ENST00000491165 TNFRSF1AP19438 455 aa18.82■□□□□ 0.6
USF3-203ENST00000491165 GLIPR1P48060 266 aa18.82■□□□□ 0.6
USF3-203ENST00000491165 HBG1P69891 147 aa18.82■□□□□ 0.6
USF3-203ENST00000491165 HBG2P69892 147 aa18.82■□□□□ 0.6
USF3-203ENST00000491165 MZT1Q08AG7 82 aa18.82■□□□□ 0.6
USF3-203ENST00000491165 ZNF343Q6P1L6 599 aa18.82■□□□□ 0.6
USF3-203ENST00000491165 ZNF525Q8N782 197 aa18.82■□□□□ 0.6
USF3-203ENST00000491165 LRRC29Q8WV35 223 aa18.82■□□□□ 0.6
USF3-203ENST00000491165 PPIHO43447 177 aaKnown RBP18.82■□□□□ 0.6
USF3-203ENST00000491165 OR2H2O95918 312 aa18.82■□□□□ 0.6
USF3-203ENST00000491165 ZNF16P17020 682 aaPredicted RBP18.82■□□□□ 0.6
USF3-203ENST00000491165 COL8A2P25067 703 aa18.82■□□□□ 0.6
USF3-203ENST00000491165 CCL19Q99731 98 aa18.82■□□□□ 0.6
USF3-203ENST00000491165 B4DEV8 164 aa18.81■□□□□ 0.6
USF3-203ENST00000491165 CXCL1P09341 107 aa18.81■□□□□ 0.6
USF3-203ENST00000491165 ZNF674Q2M3X9 581 aa18.81■□□□□ 0.6
USF3-203ENST00000491165 CCL17Q92583 94 aa18.81■□□□□ 0.6
USF3-203ENST00000491165 OR51M1Q9H341 326 aa18.81■□□□□ 0.6
USF3-203ENST00000491165 POLDIP2Q9Y2S7 368 aa18.81■□□□□ 0.6
USF3-203ENST00000491165 SVEP1Q4LDE5 3571 aa18.81■□□□□ 0.6
USF3-203ENST00000491165 LINC00587B1AMM8 73 aa18.8■□□□□ 0.6
USF3-203ENST00000491165 LHBP01229 141 aa18.8■□□□□ 0.6
USF3-203ENST00000491165 BCL2P10415 239 aa18.8■□□□□ 0.6
USF3-203ENST00000491165 ERVFRD-1P60508 538 aa18.8■□□□□ 0.6
USF3-203ENST00000491165 ARL16Q0P5N6 197 aa18.8■□□□□ 0.6
USF3-203ENST00000491165 ZNF585BQ52M93 769 aa18.8■□□□□ 0.6
USF3-203ENST00000491165 LILRB2Q8N423 598 aa18.8■□□□□ 0.6
USF3-203ENST00000491165 Q8TCH9 128 aa18.8■□□□□ 0.6
USF3-203ENST00000491165 RAB1BQ9H0U4 201 aa18.8■□□□□ 0.6
USF3-203ENST00000491165 URGCP-MRPS24S4R325 110 aa18.8■□□□□ 0.6
USF3-203ENST00000491165 ZFP92A6NM28 416 aa18.8■□□□□ 0.6
USF3-203ENST00000491165 TFF1P04155 84 aa18.8■□□□□ 0.6
USF3-203ENST00000491165 RAB11AP62491 216 aa18.8■□□□□ 0.6
USF3-203ENST00000491165 MBD3L1Q8WWY6 194 aa18.8■□□□□ 0.6
USF3-203ENST00000491165 VSIRQ9H7M9 311 aa18.8■□□□□ 0.6
USF3-203ENST00000491165 HES4Q9HCC6 221 aa18.8■□□□□ 0.6
USF3-203ENST00000491165 IGHV1-69-2A0A0G2JMI3 117 aa18.79■□□□□ 0.6
USF3-203ENST00000491165 SRRM5B3KS81 715 aa18.79■□□□□ 0.6
USF3-203ENST00000491165 HOXA5P20719 270 aa18.79■□□□□ 0.6
USF3-203ENST00000491165 SERF2P84101 59 aa18.79■□□□□ 0.6
USF3-203ENST00000491165 LRRC75BQ2VPJ9 315 aa18.79■□□□□ 0.6
USF3-203ENST00000491165 FAM90A2PQ658T7 463 aa18.79■□□□□ 0.6
USF3-203ENST00000491165 HAPLN4Q86UW8 402 aa18.79■□□□□ 0.6
USF3-203ENST00000491165 ZNF665Q9H7R5 613 aa18.79■□□□□ 0.6
USF3-203ENST00000491165 PDZD2O15018 2839 aa18.79■□□□□ 0.6
USF3-203ENST00000491165 S100PP25815 95 aa18.79■□□□□ 0.6
USF3-203ENST00000491165 CFHR2P36980 270 aa18.79■□□□□ 0.6
USF3-203ENST00000491165 LCN15Q6UWW0 184 aa18.79■□□□□ 0.6
USF3-203ENST00000491165 UBALD1Q8TB05 177 aa18.79■□□□□ 0.6
USF3-203ENST00000491165 MBNL3Q9NUK0 354 aaKnown RBP18.79■□□□□ 0.6
USF3-203ENST00000491165 CEACAM6P40199 344 aa18.78■□□□□ 0.6
USF3-203ENST00000491165 PNRC1Q12796 327 aaPredicted RBP18.78■□□□□ 0.6
USF3-203ENST00000491165 ZNF726P1Q15940 193 aa18.78■□□□□ 0.6
USF3-203ENST00000491165 RCC1LQ96I51 464 aaKnown RBP18.78■□□□□ 0.6
USF3-203ENST00000491165 TMEM106BQ9NUM4 274 aa18.78■□□□□ 0.6
USF3-203ENST00000491165 MIOXQ9UGB7 285 aa18.78■□□□□ 0.6
USF3-203ENST00000491165 OR14J1Q9UGF5 321 aa18.78■□□□□ 0.6
USF3-203ENST00000491165 ZNF469Q96JG9 3925 aaPredicted RBP18.78■□□□□ 0.6
USF3-203ENST00000491165 TGIF2-C20orf24A0A0A6YYL0 155 aa18.77■□□□□ 0.6
USF3-203ENST00000491165 RNF212BA8MTL3 300 aa18.77■□□□□ 0.6
USF3-203ENST00000491165 NXPH2O95156 264 aa18.77■□□□□ 0.6
USF3-203ENST00000491165 DRAM1Q8N682 238 aa18.77■□□□□ 0.6
USF3-203ENST00000491165 PARD6GQ9BYG4 376 aaPredicted RBP18.77■□□□□ 0.6
USF3-203ENST00000491165 TOLLIPQ9H0E2 274 aa18.77■□□□□ 0.6
USF3-203ENST00000491165 RNF7Q9UBF6 113 aa18.77■□□□□ 0.6
USF3-203ENST00000491165 WIPI2Q9Y4P8 454 aa18.77■□□□□ 0.6
USF3-203ENST00000491165 IGHV3OR15-7A0A075B7D8 119 aa18.77■□□□□ 0.6
USF3-203ENST00000491165 SH2D1BO14796 132 aa18.77■□□□□ 0.6
USF3-203ENST00000491165 YIF1AO95070 293 aa18.77■□□□□ 0.6
USF3-203ENST00000491165 CDX1P47902 265 aaPredicted RBP18.77■□□□□ 0.6
USF3-203ENST00000491165 ZNF146Q15072 292 aa18.77■□□□□ 0.6
USF3-203ENST00000491165 ACP7Q6ZNF0 438 aa18.77■□□□□ 0.6
USF3-203ENST00000491165 FAM90A26D6RGX4 464 aa18.76■□□□□ 0.59
USF3-203ENST00000491165 TMEM178BH3BS89 294 aa18.76■□□□□ 0.59
USF3-203ENST00000491165 CYB5BO43169 146 aa18.76■□□□□ 0.59
USF3-203ENST00000491165 CEBPDP49716 269 aaPredicted RBP18.76■□□□□ 0.59
USF3-203ENST00000491165 FGF8P55075 233 aaPredicted RBP18.76■□□□□ 0.59
USF3-203ENST00000491165 NDUFA6P56556 154 aa18.76■□□□□ 0.59
USF3-203ENST00000491165 TMEM41BQ5BJD5 291 aa18.76■□□□□ 0.59
USF3-203ENST00000491165 SPANXN5Q5MJ07 72 aa18.76■□□□□ 0.59
USF3-203ENST00000491165 PINX1Q96BK5 328 aaKnown RBP18.76■□□□□ 0.59
USF3-203ENST00000491165 P2RX4Q99571 388 aa18.76■□□□□ 0.59
USF3-203ENST00000491165 WDR61Q9GZS3 305 aaKnown RBP18.76■□□□□ 0.59
USF3-203ENST00000491165 IGHV4-39P01824 125 aa18.76■□□□□ 0.59
USF3-203ENST00000491165 SSX7Q7RTT5 188 aa18.76■□□□□ 0.59
USF3-203ENST00000491165 NEU4Q8WWR8 484 aaPredicted RBP18.76■□□□□ 0.59
USF3-203ENST00000491165 DOK5Q9P104 306 aa18.76■□□□□ 0.59
USF3-203ENST00000491165 FGFRL1Q8N441 504 aa18.75■□□□□ 0.59
USF3-203ENST00000491165 OR4C12Q96R67 309 aa18.75■□□□□ 0.59
USF3-203ENST00000491165 TMEM242Q9NWH2 141 aa18.75■□□□□ 0.59
USF3-203ENST00000491165 OR13D1Q8NGV5 346 aa18.74■□□□□ 0.59
USF3-203ENST00000491165 VAX2Q9UIW0 290 aa18.74■□□□□ 0.59
USF3-203ENST00000491165 NAV2Q8IVL1 2488 aa18.74■□□□□ 0.59
USF3-203ENST00000491165 IFNA1P01562 189 aa18.74■□□□□ 0.59
USF3-203ENST00000491165 SLC38A11Q08AI6 406 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms