RNA–Protein interactions for RNA: ENST00000490831.1

COL27A1-206, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 3

Gene COL27A1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-206ENST00000490831 DHRS11Q6UWP2 260 aa11.76□□□□□ -0.53
COL27A1-206ENST00000490831 OR4S2Q8NH73 311 aa11.76□□□□□ -0.53
COL27A1-206ENST00000490831 OR5B12Q96R08 314 aa11.76□□□□□ -0.53
COL27A1-206ENST00000490831 MRPS26Q9BYN8 205 aaKnown RBP11.76□□□□□ -0.53
COL27A1-206ENST00000490831 ALX4Q9H161 411 aaPredicted RBP11.76□□□□□ -0.53
COL27A1-206ENST00000490831 IFT46Q9NQC8 304 aa11.76□□□□□ -0.53
COL27A1-206ENST00000490831 CCL28Q9NRJ3 127 aa11.76□□□□□ -0.53
COL27A1-206ENST00000490831 COMMD3Q9UBI1 195 aa11.76□□□□□ -0.53
COL27A1-206ENST00000490831 SCOCQ9UIL1 159 aa11.76□□□□□ -0.53
COL27A1-206ENST00000490831 WI2-2373I1.2A0A1W2PRP0 233 aa11.75□□□□□ -0.53
COL27A1-206ENST00000490831 LINC01619G3V211 115 aa11.75□□□□□ -0.53
COL27A1-206ENST00000490831 CREBL2O60519 120 aaPredicted RBP11.75□□□□□ -0.53
COL27A1-206ENST00000490831 FCER2P06734 321 aa11.75□□□□□ -0.53
COL27A1-206ENST00000490831 PRSS3P35030 304 aa11.75□□□□□ -0.53
COL27A1-206ENST00000490831 KIR2DS2P43631 304 aa11.75□□□□□ -0.53
COL27A1-206ENST00000490831 TPPP2P59282 170 aa11.75□□□□□ -0.53
COL27A1-206ENST00000490831 DYRK1AQ13627 763 aa11.75□□□□□ -0.53
COL27A1-206ENST00000490831 IDO2Q6ZQW0 420 aa11.75□□□□□ -0.53
COL27A1-206ENST00000490831 MMD2Q8IY49 270 aa11.75□□□□□ -0.53
COL27A1-206ENST00000490831 PUSL1Q8N0Z8 303 aaKnown RBP11.75□□□□□ -0.53
COL27A1-206ENST00000490831 GPX8Q8TED1 209 aa11.75□□□□□ -0.53
COL27A1-206ENST00000490831 SECTM1Q8WVN6 248 aa11.75□□□□□ -0.53
COL27A1-206ENST00000490831 TCTEX1D2Q8WW35 142 aa11.75□□□□□ -0.53
COL27A1-206ENST00000490831 SRSF12Q8WXF0 261 aaKnown RBP11.75□□□□□ -0.53
COL27A1-206ENST00000490831 MS4A10Q96PG2 267 aa11.75□□□□□ -0.53
COL27A1-206ENST00000490831 ZNF430Q9H8G1 570 aaPredicted RBP11.75□□□□□ -0.53
COL27A1-206ENST00000490831 TAS2R8Q9NYW2 309 aa11.75□□□□□ -0.53
COL27A1-206ENST00000490831 MSGN1A6NI15 193 aa11.74□□□□□ -0.53
COL27A1-206ENST00000490831 SEC14L6B5MCN3 397 aa11.74□□□□□ -0.53
COL27A1-206ENST00000490831 RBFOX2O43251 390 aaKnown RBP eCLIP11.74□□□□□ -0.53
COL27A1-206ENST00000490831 RAMP3O60896 148 aa11.74□□□□□ -0.53
COL27A1-206ENST00000490831 TRGV3P03979 118 aa11.74□□□□□ -0.53
COL27A1-206ENST00000490831 INSL3P51460 131 aa11.74□□□□□ -0.53
COL27A1-206ENST00000490831 TAS2R46P59540 309 aa11.74□□□□□ -0.53
COL27A1-206ENST00000490831 DGCR2P98153 550 aa11.74□□□□□ -0.53
COL27A1-206ENST00000490831 TNXAQ16473 311 aa11.74□□□□□ -0.53
COL27A1-206ENST00000490831 OR2B11Q5JQS5 317 aa11.74□□□□□ -0.53
COL27A1-206ENST00000490831 LYSMD2Q8IV50 215 aa11.74□□□□□ -0.53
COL27A1-206ENST00000490831 OR5T1Q8NG75 326 aa11.74□□□□□ -0.53
COL27A1-206ENST00000490831 VSTM2AQ8TAG5 236 aa11.74□□□□□ -0.53
COL27A1-206ENST00000490831 DCUN1D4Q92564 292 aa11.74□□□□□ -0.53
COL27A1-206ENST00000490831 DCUN1D5Q9BTE7 237 aa11.74□□□□□ -0.53
COL27A1-206ENST00000490831 TINAGL1Q9GZM7 467 aaPredicted RBP11.74□□□□□ -0.53
COL27A1-206ENST00000490831 SLC5A7Q9GZV3 580 aa11.74□□□□□ -0.53
COL27A1-206ENST00000490831 SCPEP1Q9HB40 452 aa11.74□□□□□ -0.53
COL27A1-206ENST00000490831 EHFQ9NZC4 300 aa11.74□□□□□ -0.53
COL27A1-206ENST00000490831 ADAM30Q9UKF2 790 aa11.74□□□□□ -0.53
COL27A1-206ENST00000490831 IGHV4OR15-8A0A075B7B6 117 aa11.73□□□□□ -0.53
COL27A1-206ENST00000490831 A0A087WW49 117 aa11.73□□□□□ -0.53
COL27A1-206ENST00000490831 A0A0G2JLM5 398 aa11.73□□□□□ -0.53
COL27A1-206ENST00000490831 SMIM31A0A1B0GVY4 71 aa11.73□□□□□ -0.53
COL27A1-206ENST00000490831 KBTBD11O94819 623 aa11.73□□□□□ -0.53
COL27A1-206ENST00000490831 OR2A4O95047 310 aa11.73□□□□□ -0.53
COL27A1-206ENST00000490831 IGHV3-11P01762 117 aa11.73□□□□□ -0.53
COL27A1-206ENST00000490831 HSPB1P04792 205 aaKnown RBP11.73□□□□□ -0.53
COL27A1-206ENST00000490831 ELK1P19419 428 aa11.73□□□□□ -0.53
COL27A1-206ENST00000490831 RFX2P48378 723 aa11.73□□□□□ -0.53
COL27A1-206ENST00000490831 GPR107Q5VW38 600 aa11.73□□□□□ -0.53
COL27A1-206ENST00000490831 ZNF818PQ6ZRF7 136 aa11.73□□□□□ -0.53
COL27A1-206ENST00000490831 ADAD2Q8NCV1 583 aaKnown RBP11.73□□□□□ -0.53
COL27A1-206ENST00000490831 TMEM167AQ8TBQ9 72 aa11.73□□□□□ -0.53
COL27A1-206ENST00000490831 DLX4Q92988 240 aaPredicted RBP11.73□□□□□ -0.53
COL27A1-206ENST00000490831 MOB3AQ96BX8 217 aa11.73□□□□□ -0.53
COL27A1-206ENST00000490831 OR2A7Q96R45 310 aa11.73□□□□□ -0.53
COL27A1-206ENST00000490831 GPHA2Q96T91 129 aa11.73□□□□□ -0.53
COL27A1-206ENST00000490831 SPIN2AQ99865 258 aa11.73□□□□□ -0.53
COL27A1-206ENST00000490831 SPIN2BQ9BPZ2 258 aa11.73□□□□□ -0.53
COL27A1-206ENST00000490831 SULT1C2O00338 296 aa11.72□□□□□ -0.53
COL27A1-206ENST00000490831 OVOL1O14753 267 aa11.72□□□□□ -0.53
COL27A1-206ENST00000490831 TNFSF12O43508 249 aa11.72□□□□□ -0.53
COL27A1-206ENST00000490831 HPGDSO60760 199 aa11.72□□□□□ -0.53
COL27A1-206ENST00000490831 TPPPO94811 219 aa11.72□□□□□ -0.53
COL27A1-206ENST00000490831 HRASP01112 189 aa11.72□□□□□ -0.53
COL27A1-206ENST00000490831 OR9G9P0C7N8 305 aa11.72□□□□□ -0.53
COL27A1-206ENST00000490831 ZNF182P17025 639 aaPredicted RBP11.72□□□□□ -0.53
COL27A1-206ENST00000490831 GNRHRP30968 328 aa11.72□□□□□ -0.53
COL27A1-206ENST00000490831 MAS1LP35410 378 aa11.72□□□□□ -0.53
COL27A1-206ENST00000490831 SLURP1P55000 103 aa11.72□□□□□ -0.53
COL27A1-206ENST00000490831 FXYD4P59646 89 aa11.72□□□□□ -0.53
COL27A1-206ENST00000490831 MZT2AQ6P582 158 aa11.72□□□□□ -0.53
COL27A1-206ENST00000490831 VKORC1L1Q8N0U8 176 aa11.72□□□□□ -0.53
COL27A1-206ENST00000490831 OR5H2Q8NGV7 314 aa11.72□□□□□ -0.53
COL27A1-206ENST00000490831 AP3S1Q92572 193 aa11.72□□□□□ -0.53
COL27A1-206ENST00000490831 BORCS5Q969J3 196 aa11.72□□□□□ -0.53
COL27A1-206ENST00000490831 USMG5Q96IX5 58 aa11.72□□□□□ -0.53
COL27A1-206ENST00000490831 ZNF355PQ9NSJ1 428 aa11.72□□□□□ -0.53
COL27A1-206ENST00000490831 TRBV9A0A0B4J1U6 114 aa11.71□□□□□ -0.53
COL27A1-206ENST00000490831 C13orf42A0A1B0GVH6 325 aa11.71□□□□□ -0.53
COL27A1-206ENST00000490831 ACTL6BO94805 426 aa11.71□□□□□ -0.53
COL27A1-206ENST00000490831 PMP2P02689 132 aa11.71□□□□□ -0.53
COL27A1-206ENST00000490831 HERV-K104P61576 105 aa11.71□□□□□ -0.53
COL27A1-206ENST00000490831 CATR1Q13166 79 aa11.71□□□□□ -0.53
COL27A1-206ENST00000490831 POU2AF1Q16633 256 aa11.71□□□□□ -0.53
COL27A1-206ENST00000490831 GPR141Q7Z602 305 aa11.71□□□□□ -0.53
COL27A1-206ENST00000490831 ZNF429Q86V71 674 aa11.71□□□□□ -0.53
COL27A1-206ENST00000490831 TMEM17Q86X19 198 aa11.71□□□□□ -0.53
COL27A1-206ENST00000490831 SPAG16Q8N0X2 631 aa11.71□□□□□ -0.53
COL27A1-206ENST00000490831 TTC9CQ8N5M4 171 aa11.71□□□□□ -0.53
COL27A1-206ENST00000490831 CD300LFQ8TDQ1 290 aa11.71□□□□□ -0.53
COL27A1-206ENST00000490831 PHB2Q99623 299 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms