RNA–Protein interactions for RNA: ENST00000490689.3

SHOX2-205, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 4,184 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-205ENST00000490689 FAM90A5PA8MXJ8 464 aa10.87□□□□□ -0.67
SHOX2-205ENST00000490689 FAM90A23PA8MXZ1 464 aa10.87□□□□□ -0.67
SHOX2-205ENST00000490689 BMPR1BO00238 502 aa10.87□□□□□ -0.67
SHOX2-205ENST00000490689 RRHO14718 337 aa10.87□□□□□ -0.67
SHOX2-205ENST00000490689 WNT9BO14905 357 aa10.87□□□□□ -0.67
SHOX2-205ENST00000490689 IGHV3-48P01763 117 aa10.87□□□□□ -0.67
SHOX2-205ENST00000490689 FAM90A15PP0C7V4 464 aa10.87□□□□□ -0.67
SHOX2-205ENST00000490689 FAM90A13PP0C7W8 464 aa10.87□□□□□ -0.67
SHOX2-205ENST00000490689 FAM90A14PP0C7W9 464 aa10.87□□□□□ -0.67
SHOX2-205ENST00000490689 FAM90A24PP0C7X0 464 aa10.87□□□□□ -0.67
SHOX2-205ENST00000490689 SELLP14151 372 aa10.87□□□□□ -0.67
SHOX2-205ENST00000490689 CTSSP25774 331 aa10.87□□□□□ -0.67
SHOX2-205ENST00000490689 GNB1P62873 340 aa10.87□□□□□ -0.67
SHOX2-205ENST00000490689 LCN2P80188 198 aa10.87□□□□□ -0.67
SHOX2-205ENST00000490689 ERHP84090 104 aaKnown RBP10.87□□□□□ -0.67
SHOX2-205ENST00000490689 MBD3L1Q8WWY6 194 aa10.87□□□□□ -0.67
SHOX2-205ENST00000490689 HES7Q9BYE0 225 aa10.87□□□□□ -0.67
SHOX2-205ENST00000490689 DEPPQ9NTK1 212 aa10.87□□□□□ -0.67
SHOX2-205ENST00000490689 SEMA5BQ9P283 1151 aa10.87□□□□□ -0.67
SHOX2-205ENST00000490689 RAB29O14966 203 aa10.87□□□□□ -0.67
SHOX2-205ENST00000490689 APELAP0DMC3 54 aa10.87□□□□□ -0.67
SHOX2-205ENST00000490689 OPRK1P41145 380 aa10.87□□□□□ -0.67
SHOX2-205ENST00000490689 NABP1Q96AH0 204 aa10.87□□□□□ -0.67
SHOX2-205ENST00000490689 MIEN1Q9BRT3 115 aa10.87□□□□□ -0.67
SHOX2-205ENST00000490689 LAMA2P24043 3122 aaKnown RBP10.87□□□□□ -0.67
SHOX2-205ENST00000490689 IGHV3OR15-7A0A075B7D8 119 aa10.87□□□□□ -0.67
SHOX2-205ENST00000490689 VENTXO95231 258 aa10.87□□□□□ -0.67
SHOX2-205ENST00000490689 PCOLCEQ15113 449 aa10.87□□□□□ -0.67
SHOX2-205ENST00000490689 PARD6GQ9BYG4 376 aaPredicted RBP10.87□□□□□ -0.67
SHOX2-205ENST00000490689 TMEM242Q9NWH2 141 aa10.87□□□□□ -0.67
SHOX2-205ENST00000490689 TICRRQ7Z2Z1 1910 aa10.87□□□□□ -0.67
SHOX2-205ENST00000490689 PATE3B3GLJ2 98 aa10.87□□□□□ -0.67
SHOX2-205ENST00000490689 IBA57Q5T440 356 aaKnown RBP10.87□□□□□ -0.67
SHOX2-205ENST00000490689 GBGT1Q8N5D6 347 aa10.87□□□□□ -0.67
SHOX2-205ENST00000490689 TMEM208Q9BTX3 173 aa10.87□□□□□ -0.67
SHOX2-205ENST00000490689 NPVFQ9HCQ7 196 aa10.87□□□□□ -0.67
SHOX2-205ENST00000490689 THSD7BQ9C0I4 1608 aa10.86□□□□□ -0.67
SHOX2-205ENST00000490689 FCER1GP30273 86 aa10.86□□□□□ -0.67
SHOX2-205ENST00000490689 RTL8BQ17RB0 113 aa10.86□□□□□ -0.67
SHOX2-205ENST00000490689 ABLIM2Q6H8Q1 611 aa10.86□□□□□ -0.67
SHOX2-205ENST00000490689 ZIC4Q8N9L1 334 aa10.86□□□□□ -0.67
SHOX2-205ENST00000490689 CFHR5Q9BXR6 569 aa10.86□□□□□ -0.67
SHOX2-205ENST00000490689 TWSG1Q9GZX9 223 aa10.86□□□□□ -0.67
SHOX2-205ENST00000490689 IL19Q9UHD0 177 aa10.86□□□□□ -0.67
SHOX2-205ENST00000490689 TCFL5Q9UL49 500 aa10.86□□□□□ -0.67
SHOX2-205ENST00000490689 IGHV1-45A0A0A0MS14 117 aa10.86□□□□□ -0.67
SHOX2-205ENST00000490689 DPRXA6NFQ7 191 aa10.86□□□□□ -0.67
SHOX2-205ENST00000490689 FOXG1P55316 489 aaPredicted RBP10.86□□□□□ -0.67
SHOX2-205ENST00000490689 AARDQ4LEZ3 155 aa10.86□□□□□ -0.67
SHOX2-205ENST00000490689 LEMD1Q68G75 181 aa10.86□□□□□ -0.67
SHOX2-205ENST00000490689 DCTN5Q9BTE1 182 aa10.86□□□□□ -0.67
SHOX2-205ENST00000490689 TMEM167BQ9NRX6 74 aa10.86□□□□□ -0.67
SHOX2-205ENST00000490689 PPIAL4AQ9Y536 164 aa10.86□□□□□ -0.67
SHOX2-205ENST00000490689 SELENOKQ9Y6D0 94 aa10.86□□□□□ -0.67
SHOX2-205ENST00000490689 KIF26AQ9ULI4 1882 aaPredicted RBP10.86□□□□□ -0.67
SHOX2-205ENST00000490689 B4E171 279 aa10.86□□□□□ -0.67
SHOX2-205ENST00000490689 DLEU1O43261 78 aa10.86□□□□□ -0.67
SHOX2-205ENST00000490689 TSPAN7P41732 249 aa10.86□□□□□ -0.67
SHOX2-205ENST00000490689 ZNF645Q8N7E2 425 aa10.86□□□□□ -0.67
SHOX2-205ENST00000490689 PRDM14Q9GZV8 571 aa10.86□□□□□ -0.67
SHOX2-205ENST00000490689 IFITM10A6NMD0 228 aa10.85□□□□□ -0.67
SHOX2-205ENST00000490689 DNPH1O43598 174 aa10.85□□□□□ -0.67
SHOX2-205ENST00000490689 OR4A47Q6IF82 309 aa10.85□□□□□ -0.67
SHOX2-205ENST00000490689 SSX8Q7RTT4 187 aa10.85□□□□□ -0.67
SHOX2-205ENST00000490689 OR2T6Q8NHC8 308 aa10.85□□□□□ -0.67
SHOX2-205ENST00000490689 OCC1Q8TAD7 63 aa10.85□□□□□ -0.67
SHOX2-205ENST00000490689 PLPPR1Q8TBJ4 325 aa10.85□□□□□ -0.67
SHOX2-205ENST00000490689 RND1Q92730 232 aa10.85□□□□□ -0.67
SHOX2-205ENST00000490689 SIGLEC12Q96PQ1 595 aa10.85□□□□□ -0.67
SHOX2-205ENST00000490689 CGAP01215 116 aa10.85□□□□□ -0.67
SHOX2-205ENST00000490689 GZMHP20718 246 aa10.85□□□□□ -0.67
SHOX2-205ENST00000490689 CRYGSP22914 178 aa10.85□□□□□ -0.67
SHOX2-205ENST00000490689 TNFSF4P23510 183 aa10.85□□□□□ -0.67
SHOX2-205ENST00000490689 SCGB2A2Q13296 93 aa10.85□□□□□ -0.67
SHOX2-205ENST00000490689 CENPWQ5EE01 88 aa10.85□□□□□ -0.67
SHOX2-205ENST00000490689 FREM1Q5H8C1 2179 aa10.85□□□□□ -0.67
SHOX2-205ENST00000490689 RIPPLY2Q5TAB7 128 aa10.85□□□□□ -0.67
SHOX2-205ENST00000490689 ANAPC10Q9UM13 185 aa10.85□□□□□ -0.67
SHOX2-205ENST00000490689 KLF13Q9Y2Y9 288 aaPredicted RBP10.85□□□□□ -0.67
SHOX2-205ENST00000490689 TRGV5A0A0B4J1U4 118 aa10.85□□□□□ -0.67
SHOX2-205ENST00000490689 FAM90A26D6RGX4 464 aa10.85□□□□□ -0.67
SHOX2-205ENST00000490689 IGKV1-5P01602 117 aa10.85□□□□□ -0.67
SHOX2-205ENST00000490689 CELA3AP09093 270 aa10.85□□□□□ -0.67
SHOX2-205ENST00000490689 LINC00205P59089 165 aa10.85□□□□□ -0.67
SHOX2-205ENST00000490689 MRPS11P82912 194 aaKnown RBP10.85□□□□□ -0.67
SHOX2-205ENST00000490689 SMIM15Q7Z3B0 74 aa10.85□□□□□ -0.67
SHOX2-205ENST00000490689 SMRP1Q8NCR6 262 aa10.85□□□□□ -0.67
SHOX2-205ENST00000490689 HES4Q9HCC6 221 aa10.85□□□□□ -0.67
SHOX2-205ENST00000490689 TRAV24A0A0B4J272 114 aa10.84□□□□□ -0.67
SHOX2-205ENST00000490689 CT45A6P0DMU7 189 aa10.84□□□□□ -0.67
SHOX2-205ENST00000490689 CT45A5P0DMU8 189 aa10.84□□□□□ -0.67
SHOX2-205ENST00000490689 CT45A7P0DMV0 189 aa10.84□□□□□ -0.67
SHOX2-205ENST00000490689 MEOX1P50221 254 aa10.84□□□□□ -0.67
SHOX2-205ENST00000490689 FOXA3P55318 350 aaPredicted RBP10.84□□□□□ -0.67
SHOX2-205ENST00000490689 GABRA6Q16445 453 aa10.84□□□□□ -0.67
SHOX2-205ENST00000490689 CT45A1Q5HYN5 189 aa10.84□□□□□ -0.67
SHOX2-205ENST00000490689 BEND2Q8NDZ0 799 aa10.84□□□□□ -0.67
SHOX2-205ENST00000490689 OR4S2Q8NH73 311 aa10.84□□□□□ -0.67
SHOX2-205ENST00000490689 CT45A3Q8NHU0 189 aa10.84□□□□□ -0.67
SHOX2-205ENST00000490689 LYPD6BQ8NI32 183 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms