RNA–Protein interactions for RNA: ENST00000490504.5

PCCB-218, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3 BASIC

Gene PCCB, Length 1,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-218ENST00000490504 GPR146Q96CH1 333 aa12.72□□□□□ -0.37
PCCB-218ENST00000490504 ARPC5LQ9BPX5 153 aa12.72□□□□□ -0.37
PCCB-218ENST00000490504 UBQLN2Q9UHD9 624 aa12.72□□□□□ -0.37
PCCB-218ENST00000490504 A0A0G2JRQ6 117 aa12.71□□□□□ -0.37
PCCB-218ENST00000490504 MMP23AO75900 390 aa12.71□□□□□ -0.37
PCCB-218ENST00000490504 ATG12O94817 140 aa12.71□□□□□ -0.37
PCCB-218ENST00000490504 IGHV3-7P01780 117 aa12.71□□□□□ -0.37
PCCB-218ENST00000490504 DUTP33316 252 aaKnown RBP12.71□□□□□ -0.37
PCCB-218ENST00000490504 COMPP49747 757 aaPredicted RBP12.71□□□□□ -0.37
PCCB-218ENST00000490504 AKR1C2P52895 323 aa12.71□□□□□ -0.37
PCCB-218ENST00000490504 HEPN1Q6WQI6 88 aa12.71□□□□□ -0.37
PCCB-218ENST00000490504 C9orf139Q6ZV77 190 aa12.71□□□□□ -0.37
PCCB-218ENST00000490504 SPAG16Q8N0X2 631 aa12.71□□□□□ -0.37
PCCB-218ENST00000490504 LEAP2Q969E1 77 aa12.71□□□□□ -0.37
PCCB-218ENST00000490504 PLEKHA2Q9HB19 425 aa12.71□□□□□ -0.37
PCCB-218ENST00000490504 RCL1Q9Y2P8 373 aaKnown RBP12.71□□□□□ -0.37
PCCB-218ENST00000490504 DNAJC9-AS1A6NH13 148 aa12.7□□□□□ -0.38
PCCB-218ENST00000490504 MSGN1A6NI15 193 aa12.7□□□□□ -0.38
PCCB-218ENST00000490504 LINC00473A8K010 186 aa12.7□□□□□ -0.38
PCCB-218ENST00000490504 C17orf98A8MV24 154 aa12.7□□□□□ -0.38
PCCB-218ENST00000490504 M0R1X1 148 aa12.7□□□□□ -0.38
PCCB-218ENST00000490504 RAMP3O60896 148 aa12.7□□□□□ -0.38
PCCB-218ENST00000490504 ATP6V1G1O75348 118 aa12.7□□□□□ -0.38
PCCB-218ENST00000490504 IGKV1-5P01602 117 aa12.7□□□□□ -0.38
PCCB-218ENST00000490504 CCL3L1P16619 93 aa12.7□□□□□ -0.38
PCCB-218ENST00000490504 HTR2BP41595 481 aa12.7□□□□□ -0.38
PCCB-218ENST00000490504 OR2B11Q5JQS5 317 aa12.7□□□□□ -0.38
PCCB-218ENST00000490504 UTF1Q5T230 341 aa12.7□□□□□ -0.38
PCCB-218ENST00000490504 BRD3OSQ6XYD6 125 aa12.7□□□□□ -0.38
PCCB-218ENST00000490504 CD300LFQ8TDQ1 290 aa12.7□□□□□ -0.38
PCCB-218ENST00000490504 TBX15Q96SF7 602 aa12.7□□□□□ -0.38
PCCB-218ENST00000490504 PCGF1Q9BSM1 259 aa12.7□□□□□ -0.38
PCCB-218ENST00000490504 MDFIC2A0A1B0GVS7 189 aa12.7□□□□□ -0.38
PCCB-218ENST00000490504 RAB29O14966 203 aa12.7□□□□□ -0.38
PCCB-218ENST00000490504 GPR37O15354 613 aa12.7□□□□□ -0.38
PCCB-218ENST00000490504 PITX3O75364 302 aa12.7□□□□□ -0.38
PCCB-218ENST00000490504 LIPFP07098 398 aa12.7□□□□□ -0.38
PCCB-218ENST00000490504 HKR1P10072 659 aa12.7□□□□□ -0.38
PCCB-218ENST00000490504 MMP9P14780 707 aa12.7□□□□□ -0.38
PCCB-218ENST00000490504 PRTN3P24158 256 aa12.7□□□□□ -0.38
PCCB-218ENST00000490504 RPL12P30050 165 aaKnown RBP12.7□□□□□ -0.38
PCCB-218ENST00000490504 ZNF816Q0VGE8 651 aaPredicted RBP12.7□□□□□ -0.38
PCCB-218ENST00000490504 RPL39P5Q59GN2 51 aa12.7□□□□□ -0.38
PCCB-218ENST00000490504 SLC25A48Q6ZT89 311 aaKnown RBP12.7□□□□□ -0.38
PCCB-218ENST00000490504 ZC4H2Q9NQZ6 224 aa12.7□□□□□ -0.38
PCCB-218ENST00000490504 SAA2-SAA4A0A096LPE2 208 aa12.69□□□□□ -0.38
PCCB-218ENST00000490504 A0A1W2PPE3 182 aa12.69□□□□□ -0.38
PCCB-218ENST00000490504 PROP1O75360 226 aa12.69□□□□□ -0.38
PCCB-218ENST00000490504 TOX4O94842 621 aa12.69□□□□□ -0.38
PCCB-218ENST00000490504 SAA2P0DJI9 122 aaPredicted RBP12.69□□□□□ -0.38
PCCB-218ENST00000490504 PVALBP20472 110 aaPredicted RBP12.69□□□□□ -0.38
PCCB-218ENST00000490504 KIR2DS2P43631 304 aa12.69□□□□□ -0.38
PCCB-218ENST00000490504 P2RY1P47900 373 aa12.69□□□□□ -0.38
PCCB-218ENST00000490504 GNG10P50151 68 aa12.69□□□□□ -0.38
PCCB-218ENST00000490504 DLX6P56179 175 aa12.69□□□□□ -0.38
PCCB-218ENST00000490504 BRWD1-AS2P59051 145 aa12.69□□□□□ -0.38
PCCB-218ENST00000490504 ID3Q02535 119 aa12.69□□□□□ -0.38
PCCB-218ENST00000490504 OR8H3Q8N146 312 aa12.69□□□□□ -0.38
PCCB-218ENST00000490504 DMBX1Q8NFW5 382 aa12.69□□□□□ -0.38
PCCB-218ENST00000490504 ST8SIA2Q92186 375 aa12.69□□□□□ -0.38
PCCB-218ENST00000490504 ZNF471Q9BX82 626 aaPredicted RBP12.69□□□□□ -0.38
PCCB-218ENST00000490504 CACNG5Q9UF02 275 aa12.69□□□□□ -0.38
PCCB-218ENST00000490504 MMP24Q9Y5R2 645 aa12.69□□□□□ -0.38
PCCB-218ENST00000490504 S1PR2O95136 353 aa12.68□□□□□ -0.38
PCCB-218ENST00000490504 SPDEFO95238 335 aa12.68□□□□□ -0.38
PCCB-218ENST00000490504 ARF6P62330 175 aa12.68□□□□□ -0.38
PCCB-218ENST00000490504 POLR2GP62487 172 aaKnown RBP eCLIP12.68□□□□□ -0.38
PCCB-218ENST00000490504 DEFB112Q30KQ8 113 aa12.68□□□□□ -0.38
PCCB-218ENST00000490504 CXorf66Q5JRM2 361 aaPredicted RBP12.68□□□□□ -0.38
PCCB-218ENST00000490504 GPR157Q5UAW9 335 aa12.68□□□□□ -0.38
PCCB-218ENST00000490504 RUSC1-AS1Q66K80 236 aa12.68□□□□□ -0.38
PCCB-218ENST00000490504 NCR3LG1Q68D85 454 aa12.68□□□□□ -0.38
PCCB-218ENST00000490504 ODF3L1Q8IXM7 274 aa12.68□□□□□ -0.38
PCCB-218ENST00000490504 LYG1Q8N1E2 194 aa12.68□□□□□ -0.38
PCCB-218ENST00000490504 SIRPDQ9H106 197 aa12.68□□□□□ -0.38
PCCB-218ENST00000490504 C11orf1Q9H5F2 150 aa12.68□□□□□ -0.38
PCCB-218ENST00000490504 PRELID3BQ9Y3B1 194 aa12.68□□□□□ -0.38
PCCB-218ENST00000490504 TAAR5O14804 337 aa12.67□□□□□ -0.38
PCCB-218ENST00000490504 RBFOX2O43251 390 aaKnown RBP eCLIP12.67□□□□□ -0.38
PCCB-218ENST00000490504 SSSCA1O60232 199 aa12.67□□□□□ -0.38
PCCB-218ENST00000490504 GPR137BO60478 399 aa12.67□□□□□ -0.38
PCCB-218ENST00000490504 Q6ZRM9 215 aa12.67□□□□□ -0.38
PCCB-218ENST00000490504 SCARB1Q8WTV0 552 aa12.67□□□□□ -0.38
PCCB-218ENST00000490504 ADTRPQ96IZ2 230 aa12.67□□□□□ -0.38
PCCB-218ENST00000490504 COA4Q9NYJ1 87 aa12.67□□□□□ -0.38
PCCB-218ENST00000490504 NBEAL1Q6ZS30 2694 aa12.67□□□□□ -0.38
PCCB-218ENST00000490504 CENPVL3A0A0U1RRI6 287 aa12.66□□□□□ -0.38
PCCB-218ENST00000490504 WRBO00258 174 aa12.66□□□□□ -0.38
PCCB-218ENST00000490504 P0C879 139 aa12.66□□□□□ -0.38
PCCB-218ENST00000490504 G6PCP35575 357 aa12.66□□□□□ -0.38
PCCB-218ENST00000490504 THBS3P49746 956 aa12.66□□□□□ -0.38
PCCB-218ENST00000490504 LINC00205P59089 165 aa12.66□□□□□ -0.38
PCCB-218ENST00000490504 IZUMO4Q1ZYL8 232 aa12.66□□□□□ -0.38
PCCB-218ENST00000490504 AWAT1Q58HT5 328 aa12.66□□□□□ -0.38
PCCB-218ENST00000490504 SLC7A5P1Q8MH63 180 aa12.66□□□□□ -0.38
PCCB-218ENST00000490504 C3orf56Q8N813 242 aa12.66□□□□□ -0.38
PCCB-218ENST00000490504 C8orf31Q8N9H6 132 aa12.66□□□□□ -0.38
PCCB-218ENST00000490504 STOML3Q8TAV4 291 aa12.66□□□□□ -0.38
PCCB-218ENST00000490504 TAF15Q92804 592 aaKnown RBP eCLIP12.66□□□□□ -0.38
PCCB-218ENST00000490504 S1PR3Q99500 378 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms