RNA–Protein interactions for RNA: ENST00000489892.1

TRIM40-208, Transcript of tripartite motif containing 40, humanhuman

TSL 3

Gene TRIM40, Length 941 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-208ENST00000489892 TMEM56-RWDD3S4R434 201 aa9.58□□□□□ -0.88
TRIM40-208ENST00000489892 HRNRQ86YZ3 2850 aaPredicted RBP9.57□□□□□ -0.88
TRIM40-208ENST00000489892 PHF1O43189 567 aaPredicted RBP9.57□□□□□ -0.88
TRIM40-208ENST00000489892 SCGB1D2O95969 90 aa9.57□□□□□ -0.88
TRIM40-208ENST00000489892 MBPP02686 304 aaPredicted RBP9.57□□□□□ -0.88
TRIM40-208ENST00000489892 CCL3L1P16619 93 aa9.57□□□□□ -0.88
TRIM40-208ENST00000489892 OMGP23515 440 aa9.57□□□□□ -0.88
TRIM40-208ENST00000489892 UCP1P25874 307 aa9.57□□□□□ -0.88
TRIM40-208ENST00000489892 PAX6P26367 422 aa9.57□□□□□ -0.88
TRIM40-208ENST00000489892 DVL1P1P54792 670 aaPredicted RBP9.57□□□□□ -0.88
TRIM40-208ENST00000489892 DLX6P56179 175 aa9.57□□□□□ -0.88
TRIM40-208ENST00000489892 CLEC12BQ2HXU8 276 aa9.57□□□□□ -0.88
TRIM40-208ENST00000489892 NCR3LG1Q68D85 454 aa9.57□□□□□ -0.88
TRIM40-208ENST00000489892 DRAM1Q8N682 238 aa9.57□□□□□ -0.88
TRIM40-208ENST00000489892 ZNF596Q8TC21 504 aa9.57□□□□□ -0.88
TRIM40-208ENST00000489892 GLYATL2Q8WU03 294 aa9.57□□□□□ -0.88
TRIM40-208ENST00000489892 AGMATQ9BSE5 352 aa9.57□□□□□ -0.88
TRIM40-208ENST00000489892 TMEM133Q9H2Q1 129 aa9.57□□□□□ -0.88
TRIM40-208ENST00000489892 ONECUT1Q9UBC0 465 aa9.57□□□□□ -0.88
TRIM40-208ENST00000489892 PRELID3BQ9Y3B1 194 aa9.57□□□□□ -0.88
TRIM40-208ENST00000489892 A0A1B0GW64 132 aa9.56□□□□□ -0.88
TRIM40-208ENST00000489892 BTBD17A6NE02 478 aa9.56□□□□□ -0.88
TRIM40-208ENST00000489892 UMAD1C9J7I0 102 aa9.56□□□□□ -0.88
TRIM40-208ENST00000489892 ST8SIA5O15466 376 aa9.56□□□□□ -0.88
TRIM40-208ENST00000489892 PITX3O75364 302 aa9.56□□□□□ -0.88
TRIM40-208ENST00000489892 FCN3O75636 299 aa9.56□□□□□ -0.88
TRIM40-208ENST00000489892 SPP1P10451 314 aa9.56□□□□□ -0.88
TRIM40-208ENST00000489892 CD99P14209 185 aa9.56□□□□□ -0.88
TRIM40-208ENST00000489892 USF1P22415 310 aaPredicted RBP9.56□□□□□ -0.88
TRIM40-208ENST00000489892 LMO4P61968 165 aa9.56□□□□□ -0.88
TRIM40-208ENST00000489892 PEA15Q15121 130 aa9.56□□□□□ -0.88
TRIM40-208ENST00000489892 Q6ZRG5 221 aa9.56□□□□□ -0.88
TRIM40-208ENST00000489892 ZNF695Q8IW36 515 aa9.56□□□□□ -0.88
TRIM40-208ENST00000489892 FGFRL1Q8N441 504 aa9.56□□□□□ -0.88
TRIM40-208ENST00000489892 ZNF439Q8NDP4 499 aa9.56□□□□□ -0.88
TRIM40-208ENST00000489892 BEND2Q8NDZ0 799 aa9.56□□□□□ -0.88
TRIM40-208ENST00000489892 OR10X1Q8NGY0 326 aa9.56□□□□□ -0.88
TRIM40-208ENST00000489892 TMEM186Q96B77 213 aa9.56□□□□□ -0.88
TRIM40-208ENST00000489892 PBDC1Q9BVG4 233 aa9.56□□□□□ -0.88
TRIM40-208ENST00000489892 CLEC7AQ9BXN2 247 aa9.56□□□□□ -0.88
TRIM40-208ENST00000489892 MS4A7Q9GZW8 240 aaPredicted RBP9.56□□□□□ -0.88
TRIM40-208ENST00000489892 IFI27L2Q9H2X8 130 aa9.56□□□□□ -0.88
TRIM40-208ENST00000489892 UNKLQ9H9P5 680 aaKnown RBP9.56□□□□□ -0.88
TRIM40-208ENST00000489892 PRR13Q9NZ81 148 aa9.56□□□□□ -0.88
TRIM40-208ENST00000489892 RCL1Q9Y2P8 373 aaKnown RBP9.56□□□□□ -0.88
TRIM40-208ENST00000489892 PRRC2AP48634 2157 aaKnown RBP9.56□□□□□ -0.88
TRIM40-208ENST00000489892 IGHV2-70DA0A0C4DH43 119 aa9.55□□□□□ -0.88
TRIM40-208ENST00000489892 MEX3AA1L020 520 aaKnown RBP9.55□□□□□ -0.88
TRIM40-208ENST00000489892 C22orf46C9J442 243 aa9.55□□□□□ -0.88
TRIM40-208ENST00000489892 H7C2Y5 167 aa9.55□□□□□ -0.88
TRIM40-208ENST00000489892 J3QR06 171 aa9.55□□□□□ -0.88
TRIM40-208ENST00000489892 RBFOX2O43251 390 aaKnown RBP eCLIP9.55□□□□□ -0.88
TRIM40-208ENST00000489892 TXNL1O43396 289 aa9.55□□□□□ -0.88
TRIM40-208ENST00000489892 CD5P06127 495 aa9.55□□□□□ -0.88
TRIM40-208ENST00000489892 VDAC1P21796 283 aa9.55□□□□□ -0.88
TRIM40-208ENST00000489892 GATA3P23771 443 aa9.55□□□□□ -0.88
TRIM40-208ENST00000489892 PRTN3P24158 256 aa9.55□□□□□ -0.88
TRIM40-208ENST00000489892 CEACAM3P40198 252 aa9.55□□□□□ -0.88
TRIM40-208ENST00000489892 NKX2-1P43699 371 aaPredicted RBP9.55□□□□□ -0.88
TRIM40-208ENST00000489892 THBS3P49746 956 aa9.55□□□□□ -0.88
TRIM40-208ENST00000489892 CT45A1Q5HYN5 189 aa9.55□□□□□ -0.88
TRIM40-208ENST00000489892 DPPA3Q6W0C5 159 aa9.55□□□□□ -0.88
TRIM40-208ENST00000489892 FOXRED2Q8IWF2 684 aa9.55□□□□□ -0.88
TRIM40-208ENST00000489892 LYG1Q8N1E2 194 aa9.55□□□□□ -0.88
TRIM40-208ENST00000489892 ABHD12Q8N2K0 398 aa9.55□□□□□ -0.88
TRIM40-208ENST00000489892 SLC35G3Q8N808 338 aa9.55□□□□□ -0.88
TRIM40-208ENST00000489892 OR51H1Q8NH63 302 aa9.55□□□□□ -0.88
TRIM40-208ENST00000489892 CT45A3Q8NHU0 189 aa9.55□□□□□ -0.88
TRIM40-208ENST00000489892 TCTEX1D2Q8WW35 142 aa9.55□□□□□ -0.88
TRIM40-208ENST00000489892 NRGNQ92686 78 aa9.55□□□□□ -0.88
TRIM40-208ENST00000489892 CACFD1Q9UGQ2 172 aa9.55□□□□□ -0.88
TRIM40-208ENST00000489892 RNF150Q9ULK6 438 aa9.55□□□□□ -0.88
TRIM40-208ENST00000489892 YLPM1P49750 1951 aaKnown RBP9.55□□□□□ -0.88
TRIM40-208ENST00000489892 IGHV2-26A0A0B4J1V2 119 aa9.54□□□□□ -0.88
TRIM40-208ENST00000489892 KIAA1324LA8MWY0 1029 aaPredicted RBP9.54□□□□□ -0.88
TRIM40-208ENST00000489892 RNASEK-C17orf49H0YIS7 233 aa9.54□□□□□ -0.88
TRIM40-208ENST00000489892 M0R1X1 148 aa9.54□□□□□ -0.88
TRIM40-208ENST00000489892 TSPAN15O95858 294 aa9.54□□□□□ -0.88
TRIM40-208ENST00000489892 ZNF16P17020 682 aaPredicted RBP9.54□□□□□ -0.88
TRIM40-208ENST00000489892 ADCYAP1P18509 176 aa9.54□□□□□ -0.88
TRIM40-208ENST00000489892 LPAR6P43657 344 aa9.54□□□□□ -0.88
TRIM40-208ENST00000489892 GNG10P50151 68 aa9.54□□□□□ -0.88
TRIM40-208ENST00000489892 ZNF137PP52743 207 aa9.54□□□□□ -0.88
TRIM40-208ENST00000489892 VAMP2P63027 116 aa9.54□□□□□ -0.88
TRIM40-208ENST00000489892 RTL8BQ17RB0 113 aa9.54□□□□□ -0.88
TRIM40-208ENST00000489892 LYZL2Q7Z4W2 148 aa9.54□□□□□ -0.88
TRIM40-208ENST00000489892 C5orf24Q7Z6I8 188 aa9.54□□□□□ -0.88
TRIM40-208ENST00000489892 PUSL1Q8N0Z8 303 aaKnown RBP9.54□□□□□ -0.88
TRIM40-208ENST00000489892 OR2C3Q8N628 320 aa9.54□□□□□ -0.88
TRIM40-208ENST00000489892 GNPNAT1Q96EK6 184 aaPredicted RBP9.54□□□□□ -0.88
TRIM40-208ENST00000489892 PARP12Q9H0J9 701 aaKnown RBP9.54□□□□□ -0.88
TRIM40-208ENST00000489892 HRH4Q9H3N8 390 aa9.54□□□□□ -0.88
TRIM40-208ENST00000489892 ZNF469Q96JG9 3925 aaPredicted RBP9.54□□□□□ -0.88
TRIM40-208ENST00000489892 IGHV4-30-2A0A087WSY4 118 aa9.53□□□□□ -0.88
TRIM40-208ENST00000489892 B4DSR2 109 aa9.53□□□□□ -0.88
TRIM40-208ENST00000489892 TNFSF12O43508 249 aa9.53□□□□□ -0.88
TRIM40-208ENST00000489892 TSPAN9O75954 239 aa9.53□□□□□ -0.88
TRIM40-208ENST00000489892 DFFBO76075 338 aa9.53□□□□□ -0.88
TRIM40-208ENST00000489892 IGLV2-14P01704 120 aa9.53□□□□□ -0.88
TRIM40-208ENST00000489892 APOA2P02652 100 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms