RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 PRELID3BQ9Y3B1 194 aa10.69□□□□□ -0.7
SPTLC1-207ENST00000488921 DNAH9Q9NYC9 4486 aa10.69□□□□□ -0.7
SPTLC1-207ENST00000488921 A0A0G2JLM5 398 aa10.68□□□□□ -0.7
SPTLC1-207ENST00000488921 FAM25AB3EWG3 89 aa10.68□□□□□ -0.7
SPTLC1-207ENST00000488921 FAM25CB3EWG5 89 aa10.68□□□□□ -0.7
SPTLC1-207ENST00000488921 FAM25GB3EWG6 89 aa10.68□□□□□ -0.7
SPTLC1-207ENST00000488921 HLA-DQB1P01920 261 aa10.68□□□□□ -0.7
SPTLC1-207ENST00000488921 HSPB1P04792 205 aaKnown RBP10.68□□□□□ -0.7
SPTLC1-207ENST00000488921 NFYAP23511 347 aaPredicted RBP10.68□□□□□ -0.7
SPTLC1-207ENST00000488921 S100A5P33763 92 aa10.68□□□□□ -0.7
SPTLC1-207ENST00000488921 ARPC4P59998 168 aa10.68□□□□□ -0.7
SPTLC1-207ENST00000488921 UBE2KP61086 200 aa10.68□□□□□ -0.7
SPTLC1-207ENST00000488921 UBE2NLQ5JXB2 153 aa10.68□□□□□ -0.7
SPTLC1-207ENST00000488921 TEX45Q8NA69 505 aa10.68□□□□□ -0.7
SPTLC1-207ENST00000488921 DCUN1D4Q92564 292 aa10.68□□□□□ -0.7
SPTLC1-207ENST00000488921 PHB2Q99623 299 aa10.68□□□□□ -0.7
SPTLC1-207ENST00000488921 ALX4Q9H161 411 aaPredicted RBP10.68□□□□□ -0.7
SPTLC1-207ENST00000488921 ZNF256Q9Y2P7 627 aaPredicted RBP10.68□□□□□ -0.7
SPTLC1-207ENST00000488921 IGHV4OR15-8A0A075B7B6 117 aa10.67□□□□□ -0.7
SPTLC1-207ENST00000488921 A0A087WW49 117 aa10.67□□□□□ -0.7
SPTLC1-207ENST00000488921 C13orf42A0A1B0GVH6 325 aa10.67□□□□□ -0.7
SPTLC1-207ENST00000488921 LINC00473A8K010 186 aa10.67□□□□□ -0.7
SPTLC1-207ENST00000488921 SSX5O60225 188 aa10.67□□□□□ -0.7
SPTLC1-207ENST00000488921 SAP30O75446 220 aa10.67□□□□□ -0.7
SPTLC1-207ENST00000488921 IGHV3-11P01762 117 aa10.67□□□□□ -0.7
SPTLC1-207ENST00000488921 SLURP1P55000 103 aa10.67□□□□□ -0.7
SPTLC1-207ENST00000488921 SSBP2P81877 361 aaPredicted RBP10.67□□□□□ -0.7
SPTLC1-207ENST00000488921 PJVKQ0ZLH3 352 aa10.67□□□□□ -0.7
SPTLC1-207ENST00000488921 CNPY1Q3B7I2 92 aa10.67□□□□□ -0.7
SPTLC1-207ENST00000488921 OVCH2Q7RTZ1 564 aa10.67□□□□□ -0.7
SPTLC1-207ENST00000488921 OR5H6Q8NGV6 325 aa10.67□□□□□ -0.7
SPTLC1-207ENST00000488921 SLC25A38Q96DW6 304 aa10.67□□□□□ -0.7
SPTLC1-207ENST00000488921 RHOVQ96L33 236 aa10.67□□□□□ -0.7
SPTLC1-207ENST00000488921 PRR25Q96S07 402 aa10.67□□□□□ -0.7
SPTLC1-207ENST00000488921 HSD17B10Q99714 261 aaKnown RBP10.67□□□□□ -0.7
SPTLC1-207ENST00000488921 SLIRPQ9GZT3 109 aaKnown RBP10.67□□□□□ -0.7
SPTLC1-207ENST00000488921 RBMX2Q9Y388 322 aaKnown RBP10.67□□□□□ -0.7
SPTLC1-207ENST00000488921 TRAV18A0A075B6X5 111 aa10.66□□□□□ -0.7
SPTLC1-207ENST00000488921 SRRM4A7MD48 611 aaKnown RBP10.66□□□□□ -0.7
SPTLC1-207ENST00000488921 J3QRK9 145 aa10.66□□□□□ -0.7
SPTLC1-207ENST00000488921 HPGDSO60760 199 aa10.66□□□□□ -0.7
SPTLC1-207ENST00000488921 FCGR3BO75015 233 aa10.66□□□□□ -0.7
SPTLC1-207ENST00000488921 ACTL6BO94805 426 aa10.66□□□□□ -0.7
SPTLC1-207ENST00000488921 BRI3O95415 125 aa10.66□□□□□ -0.7
SPTLC1-207ENST00000488921 LY86O95711 162 aa10.66□□□□□ -0.7
SPTLC1-207ENST00000488921 APOA1P02647 267 aa10.66□□□□□ -0.7
SPTLC1-207ENST00000488921 AADACP22760 399 aa10.66□□□□□ -0.7
SPTLC1-207ENST00000488921 CDK10Q15131 360 aa10.66□□□□□ -0.7
SPTLC1-207ENST00000488921 TNXAQ16473 311 aa10.66□□□□□ -0.7
SPTLC1-207ENST00000488921 VAX1Q5SQQ9 334 aa10.66□□□□□ -0.7
SPTLC1-207ENST00000488921 BEST4Q8NFU0 473 aa10.66□□□□□ -0.7
SPTLC1-207ENST00000488921 OR5T1Q8NG75 326 aa10.66□□□□□ -0.7
SPTLC1-207ENST00000488921 OR6Q1Q8NGQ2 317 aa10.66□□□□□ -0.7
SPTLC1-207ENST00000488921 OR4S2Q8NH73 311 aa10.66□□□□□ -0.7
SPTLC1-207ENST00000488921 DLX4Q92988 240 aaPredicted RBP10.66□□□□□ -0.7
SPTLC1-207ENST00000488921 RANGRFQ9HD47 186 aaPredicted RBP10.66□□□□□ -0.7
SPTLC1-207ENST00000488921 MPPED1O15442 326 aa10.65□□□□□ -0.7
SPTLC1-207ENST00000488921 TUSC2O75896 110 aa10.65□□□□□ -0.7
SPTLC1-207ENST00000488921 ZP3P21754 424 aa10.65□□□□□ -0.7
SPTLC1-207ENST00000488921 CBX5P45973 191 aa10.65□□□□□ -0.7
SPTLC1-207ENST00000488921 PRSS8Q16651 343 aa10.65□□□□□ -0.7
SPTLC1-207ENST00000488921 ACSM6Q6P461 480 aa10.65□□□□□ -0.7
SPTLC1-207ENST00000488921 MMD2Q8IY49 270 aa10.65□□□□□ -0.7
SPTLC1-207ENST00000488921 VSTM2AQ8TAG5 236 aa10.65□□□□□ -0.7
SPTLC1-207ENST00000488921 TCTEX1D2Q8WW35 142 aa10.65□□□□□ -0.7
SPTLC1-207ENST00000488921 SRSF12Q8WXF0 261 aaKnown RBP10.65□□□□□ -0.7
SPTLC1-207ENST00000488921 TINAGL1Q9GZM7 467 aaPredicted RBP10.65□□□□□ -0.7
SPTLC1-207ENST00000488921 NXF2Q9GZY0 626 aaKnown RBP10.65□□□□□ -0.7
SPTLC1-207ENST00000488921 COA4Q9NYJ1 87 aa10.65□□□□□ -0.7
SPTLC1-207ENST00000488921 LSM4Q9Y4Z0 139 aaKnown RBP10.65□□□□□ -0.7
SPTLC1-207ENST00000488921 COL7A1Q02388 2944 aa10.64□□□□□ -0.71
SPTLC1-207ENST00000488921 IGKV1D-13A0A0B4J2D9 117 aa10.64□□□□□ -0.71
SPTLC1-207ENST00000488921 CTDSP2O14595 271 aa10.64□□□□□ -0.71
SPTLC1-207ENST00000488921 SAA1P0DJI8 122 aaPredicted RBP10.64□□□□□ -0.71
SPTLC1-207ENST00000488921 IGKV1-13P0DP09 117 aa10.64□□□□□ -0.71
SPTLC1-207ENST00000488921 KIR2DS2P43631 304 aa10.64□□□□□ -0.71
SPTLC1-207ENST00000488921 MSMO1Q15800 293 aa10.64□□□□□ -0.71
SPTLC1-207ENST00000488921 ZNF66Q6ZN08 573 aa10.64□□□□□ -0.71
SPTLC1-207ENST00000488921 IDO2Q6ZQW0 420 aa10.64□□□□□ -0.71
SPTLC1-207ENST00000488921 HOGA1Q86XE5 327 aa10.64□□□□□ -0.71
SPTLC1-207ENST00000488921 DIRAS2Q96HU8 199 aa10.64□□□□□ -0.71
SPTLC1-207ENST00000488921 USMG5Q96IX5 58 aa10.64□□□□□ -0.71
SPTLC1-207ENST00000488921 OR4C12Q96R67 309 aa10.64□□□□□ -0.71
SPTLC1-207ENST00000488921 SPIN2AQ99865 258 aa10.64□□□□□ -0.71
SPTLC1-207ENST00000488921 SPIN2BQ9BPZ2 258 aa10.64□□□□□ -0.71
SPTLC1-207ENST00000488921 ELOVL1Q9BW60 279 aa10.64□□□□□ -0.71
SPTLC1-207ENST00000488921 AUNIPQ9H7T9 357 aa10.64□□□□□ -0.71
SPTLC1-207ENST00000488921 PTTG2Q9NZH5 202 aa10.64□□□□□ -0.71
SPTLC1-207ENST00000488921 MSGN1A6NI15 193 aa10.63□□□□□ -0.71
SPTLC1-207ENST00000488921 XRCC3O43542 346 aa10.63□□□□□ -0.71
SPTLC1-207ENST00000488921 IGLV2-14P01704 120 aa10.63□□□□□ -0.71
SPTLC1-207ENST00000488921 OR9G9P0C7N8 305 aa10.63□□□□□ -0.71
SPTLC1-207ENST00000488921 NHLRC4P0CG21 123 aaPredicted RBP10.63□□□□□ -0.71
SPTLC1-207ENST00000488921 ELK1P19419 428 aa10.63□□□□□ -0.71
SPTLC1-207ENST00000488921 RPL30P62888 115 aaKnown RBP10.63□□□□□ -0.71
SPTLC1-207ENST00000488921 OR2B11Q5JQS5 317 aa10.63□□□□□ -0.71
SPTLC1-207ENST00000488921 TMEM69Q5SWH9 247 aa10.63□□□□□ -0.71
SPTLC1-207ENST00000488921 C11orf87Q6NUJ2 197 aa10.63□□□□□ -0.71
SPTLC1-207ENST00000488921 GVQW1Q8N7I0 195 aa10.63□□□□□ -0.71
SPTLC1-207ENST00000488921 ZBTB34Q8NCN2 500 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms