RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 ARPC1BO15143 372 aaKnown RBP14.62□□□□□ -0.07
PTCD3-217ENST00000488801 PGLYRP1O75594 196 aaPredicted RBP14.62□□□□□ -0.07
PTCD3-217ENST00000488801 RAB3DO95716 219 aa14.62□□□□□ -0.07
PTCD3-217ENST00000488801 TSPAN15O95858 294 aa14.62□□□□□ -0.07
PTCD3-217ENST00000488801 IGHG4P01861 327 aa14.62□□□□□ -0.07
PTCD3-217ENST00000488801 PJVKQ0ZLH3 352 aa14.62□□□□□ -0.07
PTCD3-217ENST00000488801 MEF2DQ14814 521 aa14.62□□□□□ -0.07
PTCD3-217ENST00000488801 PLGLAQ15195 96 aa14.62□□□□□ -0.07
PTCD3-217ENST00000488801 POU2AF1Q16633 256 aa14.62□□□□□ -0.07
PTCD3-217ENST00000488801 SLC38A6Q8IZM9 456 aa14.62□□□□□ -0.07
PTCD3-217ENST00000488801 PUSL1Q8N0Z8 303 aaKnown RBP14.62□□□□□ -0.07
PTCD3-217ENST00000488801 MINDY2Q8NBR6 621 aa14.62□□□□□ -0.07
PTCD3-217ENST00000488801 OR4C16Q8NGL9 310 aa14.62□□□□□ -0.07
PTCD3-217ENST00000488801 MYOZ3Q8TDC0 251 aa14.62□□□□□ -0.07
PTCD3-217ENST00000488801 GON7Q9BXV9 100 aa14.62□□□□□ -0.07
PTCD3-217ENST00000488801 IGLV1-40P01703 118 aa14.61□□□□□ -0.07
PTCD3-217ENST00000488801 RLN1P04808 185 aa14.61□□□□□ -0.07
PTCD3-217ENST00000488801 AKAIN1P0CW23 69 aa14.61□□□□□ -0.07
PTCD3-217ENST00000488801 PSMB8P28062 276 aa14.61□□□□□ -0.07
PTCD3-217ENST00000488801 SLC35B1P78383 322 aa14.61□□□□□ -0.07
PTCD3-217ENST00000488801 VMA21Q3ZAQ7 101 aa14.61□□□□□ -0.07
PTCD3-217ENST00000488801 FAAP20Q6NZ36 180 aa14.61□□□□□ -0.07
PTCD3-217ENST00000488801 LPCAT3Q6P1A2 487 aa14.61□□□□□ -0.07
PTCD3-217ENST00000488801 SPAG16Q8N0X2 631 aa14.61□□□□□ -0.07
PTCD3-217ENST00000488801 SRRQ9GZT4 340 aa14.61□□□□□ -0.07
PTCD3-217ENST00000488801 PARP11Q9NR21 331 aa14.61□□□□□ -0.07
PTCD3-217ENST00000488801 NUBP2Q9Y5Y2 271 aa14.61□□□□□ -0.07
PTCD3-217ENST00000488801 NOTCH3Q9UM47 2321 aa14.61□□□□□ -0.07
PTCD3-217ENST00000488801 G3V318 75 aa14.6□□□□□ -0.07
PTCD3-217ENST00000488801 IFNA6P05013 189 aa14.6□□□□□ -0.07
PTCD3-217ENST00000488801 VDAC1P21796 283 aa14.6□□□□□ -0.07
PTCD3-217ENST00000488801 RND3P61587 244 aa14.6□□□□□ -0.07
PTCD3-217ENST00000488801 FOXE3Q13461 319 aa14.6□□□□□ -0.07
PTCD3-217ENST00000488801 KLF9Q13886 244 aaPredicted RBP14.6□□□□□ -0.07
PTCD3-217ENST00000488801 PRSS8Q16651 343 aa14.6□□□□□ -0.07
PTCD3-217ENST00000488801 CMTM1Q8IZ96 169 aa14.6□□□□□ -0.07
PTCD3-217ENST00000488801 TCTEX1D1Q8N7M0 179 aa14.6□□□□□ -0.07
PTCD3-217ENST00000488801 OR51H1Q8NH63 302 aa14.6□□□□□ -0.07
PTCD3-217ENST00000488801 TERB2Q8NHR7 220 aa14.6□□□□□ -0.07
PTCD3-217ENST00000488801 ARPC1AQ92747 370 aa14.6□□□□□ -0.07
PTCD3-217ENST00000488801 ZNF486Q96H40 463 aaPredicted RBP14.6□□□□□ -0.07
PTCD3-217ENST00000488801 SLC2A9Q9NRM0 540 aa14.6□□□□□ -0.07
PTCD3-217ENST00000488801 FAM212BQ9NTI7 297 aaPredicted RBP14.6□□□□□ -0.07
PTCD3-217ENST00000488801 SLC2A8Q9NY64 477 aa14.6□□□□□ -0.07
PTCD3-217ENST00000488801 TSSC4Q9Y5U2 329 aaPredicted RBP14.6□□□□□ -0.07
PTCD3-217ENST00000488801 NOTCH1P46531 2555 aa14.59□□□□□ -0.07
PTCD3-217ENST00000488801 TRAV41A0A0B4J266 112 aa14.59□□□□□ -0.07
PTCD3-217ENST00000488801 KBTBD11O94819 623 aa14.59□□□□□ -0.07
PTCD3-217ENST00000488801 HPRT1P00492 218 aa14.59□□□□□ -0.07
PTCD3-217ENST00000488801 OPN1MWP04001 364 aa14.59□□□□□ -0.07
PTCD3-217ENST00000488801 ELANEP08246 267 aa14.59□□□□□ -0.07
PTCD3-217ENST00000488801 IL6RP08887 468 aaPredicted RBP14.59□□□□□ -0.07
PTCD3-217ENST00000488801 OPN1MW2P0DN77 364 aa14.59□□□□□ -0.07
PTCD3-217ENST00000488801 OPN1MW3P0DN78 364 aa14.59□□□□□ -0.07
PTCD3-217ENST00000488801 F2RP25116 425 aa14.59□□□□□ -0.07
PTCD3-217ENST00000488801 TAS2R31P59538 309 aa14.59□□□□□ -0.07
PTCD3-217ENST00000488801 SPANXN2Q5MJ10 180 aa14.59□□□□□ -0.07
PTCD3-217ENST00000488801 TEX38Q6PEX7 206 aa14.59□□□□□ -0.07
PTCD3-217ENST00000488801 IDO2Q6ZQW0 420 aa14.59□□□□□ -0.07
PTCD3-217ENST00000488801 TMEM167AQ8TBQ9 72 aa14.59□□□□□ -0.07
PTCD3-217ENST00000488801 CD300LFQ8TDQ1 290 aa14.59□□□□□ -0.07
PTCD3-217ENST00000488801 RHOVQ96L33 236 aa14.59□□□□□ -0.07
PTCD3-217ENST00000488801 CLCC1Q96S66 551 aa14.59□□□□□ -0.07
PTCD3-217ENST00000488801 THAP7Q9BT49 309 aaPredicted RBP14.59□□□□□ -0.07
PTCD3-217ENST00000488801 PLEKHA2Q9HB19 425 aa14.59□□□□□ -0.07
PTCD3-217ENST00000488801 COMMD9Q9P000 198 aa14.59□□□□□ -0.07
PTCD3-217ENST00000488801 SOX15O60248 233 aa14.58□□□□□ -0.08
PTCD3-217ENST00000488801 RPL23AP62750 156 aaKnown RBP14.58□□□□□ -0.08
PTCD3-217ENST00000488801 FXYD3Q14802 87 aa14.58□□□□□ -0.08
PTCD3-217ENST00000488801 ZNF585BQ52M93 769 aa14.58□□□□□ -0.08
PTCD3-217ENST00000488801 PHLDA2Q53GA4 152 aa14.58□□□□□ -0.08
PTCD3-217ENST00000488801 AKIRIN2Q53H80 203 aa14.58□□□□□ -0.08
PTCD3-217ENST00000488801 VKORC1L1Q8N0U8 176 aa14.58□□□□□ -0.08
PTCD3-217ENST00000488801 Q8N402 240 aa14.58□□□□□ -0.08
PTCD3-217ENST00000488801 OR13C8Q8NGS7 320 aa14.58□□□□□ -0.08
PTCD3-217ENST00000488801 SDHCQ99643 169 aaPredicted RBP14.58□□□□□ -0.08
PTCD3-217ENST00000488801 ZNF430Q9H8G1 570 aaPredicted RBP14.58□□□□□ -0.08
PTCD3-217ENST00000488801 BET1LQ9NYM9 111 aa14.58□□□□□ -0.08
PTCD3-217ENST00000488801 WSB1Q9Y6I7 421 aa14.58□□□□□ -0.08
PTCD3-217ENST00000488801 TCRBV4S1A1TA0A5B7 111 aa14.57□□□□□ -0.08
PTCD3-217ENST00000488801 S1PR2O95136 353 aa14.57□□□□□ -0.08
PTCD3-217ENST00000488801 HRASP01112 189 aa14.57□□□□□ -0.08
PTCD3-217ENST00000488801 FGF2P09038 288 aa14.57□□□□□ -0.08
PTCD3-217ENST00000488801 PPP5CP53041 499 aa14.57□□□□□ -0.08
PTCD3-217ENST00000488801 SURF2Q15527 256 aaPredicted RBP14.57□□□□□ -0.08
PTCD3-217ENST00000488801 PYDC2Q56P42 97 aa14.57□□□□□ -0.08
PTCD3-217ENST00000488801 ASPHD1Q5U4P2 390 aa14.57□□□□□ -0.08
PTCD3-217ENST00000488801 CADM3Q8N126 398 aa14.57□□□□□ -0.08
PTCD3-217ENST00000488801 VSTM2AQ8TAG5 236 aa14.57□□□□□ -0.08
PTCD3-217ENST00000488801 DEDD2Q8WXF8 326 aa14.57□□□□□ -0.08
PTCD3-217ENST00000488801 FAM103A1Q9BTL3 118 aaKnown RBP14.57□□□□□ -0.08
PTCD3-217ENST00000488801 DISC1C4P0D8 188 aa14.56□□□□□ -0.08
PTCD3-217ENST00000488801 CREBL2O60519 120 aaPredicted RBP14.56□□□□□ -0.08
PTCD3-217ENST00000488801 OR2A4O95047 310 aa14.56□□□□□ -0.08
PTCD3-217ENST00000488801 RPLP1P05386 114 aaKnown RBP14.56□□□□□ -0.08
PTCD3-217ENST00000488801 NQO2P16083 231 aa14.56□□□□□ -0.08
PTCD3-217ENST00000488801 ECI1P42126 302 aa14.56□□□□□ -0.08
PTCD3-217ENST00000488801 KIAA0141Q14154 515 aaPredicted RBP14.56□□□□□ -0.08
PTCD3-217ENST00000488801 ECSCRQ19T08 205 aa14.56□□□□□ -0.08
PTCD3-217ENST00000488801 NSUN5P1Q3KNT7 163 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms