RNA–Protein interactions for RNA: ENST00000488454.5

SKA1-204, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 3 BASIC

Gene SKA1, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-204ENST00000488454 HPRT1P00492 218 aa8.21□□□□□ -1.1
SKA1-204ENST00000488454 HRASP01112 189 aa8.21□□□□□ -1.1
SKA1-204ENST00000488454 SERPINE2P07093 398 aa8.21□□□□□ -1.1
SKA1-204ENST00000488454 ANXA3P12429 323 aa8.21□□□□□ -1.1
SKA1-204ENST00000488454 AKR1C4P17516 323 aa8.21□□□□□ -1.1
SKA1-204ENST00000488454 F2RL1P55085 397 aa8.21□□□□□ -1.1
SKA1-204ENST00000488454 RIPPLY3P57055 190 aa8.21□□□□□ -1.1
SKA1-204ENST00000488454 SRSF2Q01130 221 aaKnown RBP8.21□□□□□ -1.1
SKA1-204ENST00000488454 ASAH1Q13510 395 aa8.21□□□□□ -1.1
SKA1-204ENST00000488454 VMA21Q3ZAQ7 101 aa8.21□□□□□ -1.1
SKA1-204ENST00000488454 TMEM177Q53S58 311 aa8.21□□□□□ -1.1
SKA1-204ENST00000488454 LIN54Q6MZP7 749 aa8.21□□□□□ -1.1
SKA1-204ENST00000488454 Q8N6K4 173 aa8.21□□□□□ -1.1
SKA1-204ENST00000488454 MRGPRFQ96AM1 343 aa8.21□□□□□ -1.1
SKA1-204ENST00000488454 PRSS22Q9GZN4 317 aa8.21□□□□□ -1.1
SKA1-204ENST00000488454 C5orf66Q9H5L9 145 aa8.21□□□□□ -1.1
SKA1-204ENST00000488454 VSIG4Q9Y279 399 aa8.21□□□□□ -1.1
SKA1-204ENST00000488454 NIPBLQ6KC79 2804 aaeCLIP8.21□□□□□ -1.1
SKA1-204ENST00000488454 DNHD1Q96M86 4753 aa8.21□□□□□ -1.1
SKA1-204ENST00000488454 RRHO14718 337 aa8.2□□□□□ -1.1
SKA1-204ENST00000488454 CHST1O43916 411 aa8.2□□□□□ -1.1
SKA1-204ENST00000488454 ATG12O94817 140 aa8.2□□□□□ -1.1
SKA1-204ENST00000488454 SPDEFO95238 335 aa8.2□□□□□ -1.1
SKA1-204ENST00000488454 LPAR6P43657 344 aa8.2□□□□□ -1.1
SKA1-204ENST00000488454 TAS2R31P59538 309 aa8.2□□□□□ -1.1
SKA1-204ENST00000488454 ERVK-16P61578 105 aa8.2□□□□□ -1.1
SKA1-204ENST00000488454 PSG5Q15238 335 aa8.2□□□□□ -1.1
SKA1-204ENST00000488454 TRIM16LQ309B1 348 aa8.2□□□□□ -1.1
SKA1-204ENST00000488454 C9orf152Q5JTZ5 239 aa8.2□□□□□ -1.1
SKA1-204ENST00000488454 CENPSQ8N2Z9 138 aa8.2□□□□□ -1.1
SKA1-204ENST00000488454 C5orf56Q8N8D9 126 aa8.2□□□□□ -1.1
SKA1-204ENST00000488454 ADAD2Q8NCV1 583 aaKnown RBP8.2□□□□□ -1.1
SKA1-204ENST00000488454 NPBQ8NG41 125 aa8.2□□□□□ -1.1
SKA1-204ENST00000488454 ENKURQ8TC29 256 aa8.2□□□□□ -1.1
SKA1-204ENST00000488454 TMEM158Q8WZ71 300 aa8.2□□□□□ -1.1
SKA1-204ENST00000488454 RBMXL1Q96E39 390 aaKnown RBP8.2□□□□□ -1.1
SKA1-204ENST00000488454 RITA1Q96K30 269 aa8.2□□□□□ -1.1
SKA1-204ENST00000488454 NAA60Q9H7X0 242 aa8.2□□□□□ -1.1
SKA1-204ENST00000488454 PLEKHA2Q9HB19 425 aa8.2□□□□□ -1.1
SKA1-204ENST00000488454 PLSCR3Q9NRY6 295 aa8.2□□□□□ -1.1
SKA1-204ENST00000488454 FAM212BQ9NTI7 297 aaPredicted RBP8.2□□□□□ -1.1
SKA1-204ENST00000488454 METTL1Q9UBP6 276 aaKnown RBP8.2□□□□□ -1.1
SKA1-204ENST00000488454 TBC1D24Q9ULP9 559 aa8.2□□□□□ -1.1
SKA1-204ENST00000488454 PIGBOS1A0A0B4J2F0 54 aa8.19□□□□□ -1.1
SKA1-204ENST00000488454 CRYM-AS1A6NIL9 109 aa8.19□□□□□ -1.1
SKA1-204ENST00000488454 H0Y980 276 aa8.19□□□□□ -1.1
SKA1-204ENST00000488454 SLC25A17O43808 307 aa8.19□□□□□ -1.1
SKA1-204ENST00000488454 RAMP3O60896 148 aa8.19□□□□□ -1.1
SKA1-204ENST00000488454 TCRBP04435 133 aa8.19□□□□□ -1.1
SKA1-204ENST00000488454 RPA2P15927 270 aa8.19□□□□□ -1.1
SKA1-204ENST00000488454 NQO2P16083 231 aa8.19□□□□□ -1.1
SKA1-204ENST00000488454 CNTFRP26992 372 aa8.19□□□□□ -1.1
SKA1-204ENST00000488454 SLC6A1P30531 599 aa8.19□□□□□ -1.1
SKA1-204ENST00000488454 UBE2KP61086 200 aa8.19□□□□□ -1.1
SKA1-204ENST00000488454 BLCAPP62952 87 aa8.19□□□□□ -1.1
SKA1-204ENST00000488454 IFITM3Q01628 133 aa8.19□□□□□ -1.1
SKA1-204ENST00000488454 DHODHQ02127 395 aa8.19□□□□□ -1.1
SKA1-204ENST00000488454 C5orf64Q2M2E5 130 aa8.19□□□□□ -1.1
SKA1-204ENST00000488454 SP6Q3SY56 376 aa8.19□□□□□ -1.1
SKA1-204ENST00000488454 FBLN7Q53RD9 439 aa8.19□□□□□ -1.1
SKA1-204ENST00000488454 TMEM128Q5BJH2 165 aa8.19□□□□□ -1.1
SKA1-204ENST00000488454 Q8N9W7 124 aa8.19□□□□□ -1.1
SKA1-204ENST00000488454 TEX45Q8NA69 505 aa8.19□□□□□ -1.1
SKA1-204ENST00000488454 DMBX1Q8NFW5 382 aa8.19□□□□□ -1.1
SKA1-204ENST00000488454 OR4F5Q8NH21 305 aa8.19□□□□□ -1.1
SKA1-204ENST00000488454 OR2T6Q8NHC8 308 aa8.19□□□□□ -1.1
SKA1-204ENST00000488454 VSTM2AQ8TAG5 236 aa8.19□□□□□ -1.1
SKA1-204ENST00000488454 FBXL15Q9H469 300 aa8.19□□□□□ -1.1
SKA1-204ENST00000488454 RANBP3Q9H6Z4 567 aaPredicted RBP8.19□□□□□ -1.1
SKA1-204ENST00000488454 SRRM4A7MD48 611 aaKnown RBP8.18□□□□□ -1.1
SKA1-204ENST00000488454 ARPC1BO15143 372 aaKnown RBP8.18□□□□□ -1.1
SKA1-204ENST00000488454 CREBL2O60519 120 aaPredicted RBP8.18□□□□□ -1.1
SKA1-204ENST00000488454 ACTL6BO94805 426 aa8.18□□□□□ -1.1
SKA1-204ENST00000488454 OR2A4O95047 310 aa8.18□□□□□ -1.1
SKA1-204ENST00000488454 S1PR2O95136 353 aa8.18□□□□□ -1.1
SKA1-204ENST00000488454 NDUFA3O95167 84 aa8.18□□□□□ -1.1
SKA1-204ENST00000488454 NDUFA7O95182 113 aa8.18□□□□□ -1.1
SKA1-204ENST00000488454 OR5AC1P0C628 307 aa8.18□□□□□ -1.1
SKA1-204ENST00000488454 HKR1P10072 659 aa8.18□□□□□ -1.1
SKA1-204ENST00000488454 VAMP1P23763 118 aa8.18□□□□□ -1.1
SKA1-204ENST00000488454 BTCP35070 178 aa8.18□□□□□ -1.1
SKA1-204ENST00000488454 RAG2P55895 527 aa8.18□□□□□ -1.1
SKA1-204ENST00000488454 BRWD1-AS2P59051 145 aa8.18□□□□□ -1.1
SKA1-204ENST00000488454 FOXL1Q12952 345 aa8.18□□□□□ -1.1
SKA1-204ENST00000488454 ZNF585BQ52M93 769 aa8.18□□□□□ -1.1
SKA1-204ENST00000488454 SSX9Q7RTT3 188 aa8.18□□□□□ -1.1
SKA1-204ENST00000488454 SLC25A42Q86VD7 318 aa8.18□□□□□ -1.1
SKA1-204ENST00000488454 ZNF695Q8IW36 515 aa8.18□□□□□ -1.1
SKA1-204ENST00000488454 R3HDM4Q96D70 268 aa8.18□□□□□ -1.1
SKA1-204ENST00000488454 RHOVQ96L33 236 aa8.18□□□□□ -1.1
SKA1-204ENST00000488454 OR2A7Q96R45 310 aa8.18□□□□□ -1.1
SKA1-204ENST00000488454 TP53RKQ96S44 253 aa8.18□□□□□ -1.1
SKA1-204ENST00000488454 CLCC1Q96S66 551 aa8.18□□□□□ -1.1
SKA1-204ENST00000488454 BEX1Q9HBH7 125 aa8.18□□□□□ -1.1
SKA1-204ENST00000488454 PALMDQ9NP74 551 aa8.18□□□□□ -1.1
SKA1-204ENST00000488454 COMMD9Q9P000 198 aa8.18□□□□□ -1.1
SKA1-204ENST00000488454 FLVCR2Q9UPI3 526 aa8.18□□□□□ -1.1
SKA1-204ENST00000488454 NUBP2Q9Y5Y2 271 aa8.18□□□□□ -1.1
SKA1-204ENST00000488454 JMJD1CQ15652 2540 aa8.17□□□□□ -1.1
SKA1-204ENST00000488454 SH2D7A6NKC9 451 aaPredicted RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms