RNA–Protein interactions for RNA: ENST00000488279.6

PTPN4-211, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-211ENST00000488279 DEFA5Q01523 94 aa17.28■□□□□ 0.36
PTPN4-211ENST00000488279 CDK10Q15131 360 aa17.28■□□□□ 0.36
PTPN4-211ENST00000488279 KCTD9Q7L273 389 aa17.28■□□□□ 0.36
PTPN4-211ENST00000488279 SPIN2AQ99865 258 aa17.28■□□□□ 0.36
PTPN4-211ENST00000488279 SPIN2BQ9BPZ2 258 aa17.28■□□□□ 0.36
PTPN4-211ENST00000488279 ZMAT4Q9H898 229 aa17.28■□□□□ 0.36
PTPN4-211ENST00000488279 ZNF430Q9H8G1 570 aaPredicted RBP17.28■□□□□ 0.36
PTPN4-211ENST00000488279 ANXA10Q9UJ72 324 aa17.28■□□□□ 0.36
PTPN4-211ENST00000488279 MRPS7Q9Y2R9 242 aaKnown RBP17.28■□□□□ 0.36
PTPN4-211ENST00000488279 RBMX2Q9Y388 322 aaKnown RBP17.28■□□□□ 0.36
PTPN4-211ENST00000488279 RYR3Q15413 4870 aa17.28■□□□□ 0.36
PTPN4-211ENST00000488279 SAA1P0DJI8 122 aaPredicted RBP17.27■□□□□ 0.36
PTPN4-211ENST00000488279 MMD2Q8IY49 270 aa17.27■□□□□ 0.36
PTPN4-211ENST00000488279 Q8N1Y9 231 aa17.27■□□□□ 0.36
PTPN4-211ENST00000488279 LGALS14Q8TCE9 139 aa17.27■□□□□ 0.36
PTPN4-211ENST00000488279 SNAPC3Q92966 411 aa17.27■□□□□ 0.36
PTPN4-211ENST00000488279 OR51E2Q9H255 320 aa17.27■□□□□ 0.36
PTPN4-211ENST00000488279 H0Y980 276 aa17.26■□□□□ 0.35
PTPN4-211ENST00000488279 IGLV2-14P01704 120 aa17.26■□□□□ 0.35
PTPN4-211ENST00000488279 TRBV12-3P01733 135 aa17.26■□□□□ 0.35
PTPN4-211ENST00000488279 SDC2P34741 201 aa17.26■□□□□ 0.35
PTPN4-211ENST00000488279 RPEL1Q2QD12 228 aa17.26■□□□□ 0.35
PTPN4-211ENST00000488279 IL34Q6ZMJ4 242 aa17.26■□□□□ 0.35
PTPN4-211ENST00000488279 HSD17B10Q99714 261 aaKnown RBP17.26■□□□□ 0.35
PTPN4-211ENST00000488279 RHBDL2Q9NX52 303 aa17.26■□□□□ 0.35
PTPN4-211ENST00000488279 IGKV1D-13A0A0B4J2D9 117 aa17.25■□□□□ 0.35
PTPN4-211ENST00000488279 FAM223BA6NKX1 122 aa17.25■□□□□ 0.35
PTPN4-211ENST00000488279 SSX5O60225 188 aa17.25■□□□□ 0.35
PTPN4-211ENST00000488279 RBMXL2O75526 392 aaKnown RBP17.25■□□□□ 0.35
PTPN4-211ENST00000488279 IGHV4-30-4P0DP06 118 aa17.25■□□□□ 0.35
PTPN4-211ENST00000488279 IGKV1-13P0DP09 117 aa17.25■□□□□ 0.35
PTPN4-211ENST00000488279 RPL30P62888 115 aaKnown RBP17.25■□□□□ 0.35
PTPN4-211ENST00000488279 RHOGP84095 191 aa17.25■□□□□ 0.35
PTPN4-211ENST00000488279 MXD1Q05195 221 aa17.25■□□□□ 0.35
PTPN4-211ENST00000488279 ATP5G2Q06055 141 aa17.25■□□□□ 0.35
PTPN4-211ENST00000488279 OR2B11Q5JQS5 317 aa17.25■□□□□ 0.35
PTPN4-211ENST00000488279 ZNF773Q6PK81 442 aa17.25■□□□□ 0.35
PTPN4-211ENST00000488279 FAM223AQ8IWN6 122 aa17.25■□□□□ 0.35
PTPN4-211ENST00000488279 SGPP2Q8IWX5 399 aa17.25■□□□□ 0.35
PTPN4-211ENST00000488279 PRH1P02810 166 aa17.24■□□□□ 0.35
PTPN4-211ENST00000488279 SCAND1P57086 179 aa17.24■□□□□ 0.35
PTPN4-211ENST00000488279 TTC9CQ8N5M4 171 aa17.24■□□□□ 0.35
PTPN4-211ENST00000488279 OR4S2Q8NH73 311 aa17.24■□□□□ 0.35
PTPN4-211ENST00000488279 AKIP1Q9NQ31 210 aa17.24■□□□□ 0.35
PTPN4-211ENST00000488279 SIGLEC8Q9NYZ4 499 aa17.24■□□□□ 0.35
PTPN4-211ENST00000488279 ADAM30Q9UKF2 790 aa17.24■□□□□ 0.35
PTPN4-211ENST00000488279 SPATA2Q9UM82 520 aa17.24■□□□□ 0.35
PTPN4-211ENST00000488279 A8MZ25 164 aa17.23■□□□□ 0.35
PTPN4-211ENST00000488279 SLC25A42Q86VD7 318 aa17.23■□□□□ 0.35
PTPN4-211ENST00000488279 VKORC1L1Q8N0U8 176 aa17.23■□□□□ 0.35
PTPN4-211ENST00000488279 VSTM2AQ8TAG5 236 aa17.23■□□□□ 0.35
PTPN4-211ENST00000488279 TCTEX1D2Q8WW35 142 aa17.23■□□□□ 0.35
PTPN4-211ENST00000488279 ETV7Q9Y603 341 aa17.23■□□□□ 0.35
PTPN4-211ENST00000488279 TRAV18A0A075B6X5 111 aa17.22■□□□□ 0.35
PTPN4-211ENST00000488279 TRBV9A0A0B4J1U6 114 aa17.22■□□□□ 0.35
PTPN4-211ENST00000488279 LOC100506127A0A0U1RQW1 187 aa17.22■□□□□ 0.35
PTPN4-211ENST00000488279 OR2A4O95047 310 aa17.22■□□□□ 0.35
PTPN4-211ENST00000488279 CSN3P07498 182 aa17.22■□□□□ 0.35
PTPN4-211ENST00000488279 C10orf55Q5SWW7 151 aa17.22■□□□□ 0.35
PTPN4-211ENST00000488279 IDNKQ5T6J7 187 aa17.22■□□□□ 0.35
PTPN4-211ENST00000488279 ZNF66Q6ZN08 573 aa17.22■□□□□ 0.35
PTPN4-211ENST00000488279 MFSD4AQ8N468 514 aa17.22■□□□□ 0.35
PTPN4-211ENST00000488279 NECAP1Q8NC96 275 aa17.22■□□□□ 0.35
PTPN4-211ENST00000488279 MUC7Q8TAX7 377 aa17.22■□□□□ 0.35
PTPN4-211ENST00000488279 OR2A7Q96R45 310 aa17.22■□□□□ 0.35
PTPN4-211ENST00000488279 C19orf73Q9NVV2 129 aa17.22■□□□□ 0.35
PTPN4-211ENST00000488279 TAS2R8Q9NYW2 309 aa17.22■□□□□ 0.35
PTPN4-211ENST00000488279 PEMTQ9UBM1 199 aa17.22■□□□□ 0.35
PTPN4-211ENST00000488279 CLEC2LP0C7M8 214 aa17.21■□□□□ 0.35
PTPN4-211ENST00000488279 ARPC4P59998 168 aa17.21■□□□□ 0.35
PTPN4-211ENST00000488279 ZNF45Q02386 682 aa17.21■□□□□ 0.35
PTPN4-211ENST00000488279 EIF4EBP1Q13541 118 aaPredicted RBP17.21■□□□□ 0.35
PTPN4-211ENST00000488279 EXOSC2Q13868 293 aaKnown RBP17.21■□□□□ 0.35
PTPN4-211ENST00000488279 LCN12Q6JVE5 192 aa17.21■□□□□ 0.35
PTPN4-211ENST00000488279 BEST4Q8NFU0 473 aa17.21■□□□□ 0.35
PTPN4-211ENST00000488279 OR5H6Q8NGV6 325 aa17.21■□□□□ 0.35
PTPN4-211ENST00000488279 RNF167Q9H6Y7 350 aa17.21■□□□□ 0.35
PTPN4-211ENST00000488279 TNCP24821 2201 aa17.21■□□□□ 0.35
PTPN4-211ENST00000488279 A0A0A6YYH2 397 aa17.2■□□□□ 0.34
PTPN4-211ENST00000488279 A6NJ64 397 aa17.2■□□□□ 0.34
PTPN4-211ENST00000488279 FCGR2CP31995 323 aa17.2■□□□□ 0.34
PTPN4-211ENST00000488279 GTSCR1Q86UQ5 136 aa17.2■□□□□ 0.34
PTPN4-211ENST00000488279 Q8N402 240 aa17.2■□□□□ 0.34
PTPN4-211ENST00000488279 TM2D3Q9BRN9 247 aa17.2■□□□□ 0.34
PTPN4-211ENST00000488279 DIABLOQ9NR28 239 aa17.2■□□□□ 0.34
PTPN4-211ENST00000488279 ZNF257Q9Y2Q1 563 aa17.2■□□□□ 0.34
PTPN4-211ENST00000488279 DNAH7Q8WXX0 4024 aa17.2■□□□□ 0.34
PTPN4-211ENST00000488279 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.19■□□□□ 0.34
PTPN4-211ENST00000488279 DPPA5A6NC42 116 aa17.19■□□□□ 0.34
PTPN4-211ENST00000488279 HMX3A6NHT5 357 aa17.19■□□□□ 0.34
PTPN4-211ENST00000488279 BMPR1BO00238 502 aa17.19■□□□□ 0.34
PTPN4-211ENST00000488279 AIREO43918 545 aa17.19■□□□□ 0.34
PTPN4-211ENST00000488279 KBTBD11O94819 623 aa17.19■□□□□ 0.34
PTPN4-211ENST00000488279 HRASP01112 189 aa17.19■□□□□ 0.34
PTPN4-211ENST00000488279 MAS1LP35410 378 aa17.19■□□□□ 0.34
PTPN4-211ENST00000488279 BRWD1-AS2P59051 145 aa17.19■□□□□ 0.34
PTPN4-211ENST00000488279 C15orf32Q32M92 178 aa17.19■□□□□ 0.34
PTPN4-211ENST00000488279 FAM209BQ5JX69 171 aa17.19■□□□□ 0.34
PTPN4-211ENST00000488279 HOGA1Q86XE5 327 aa17.19■□□□□ 0.34
PTPN4-211ENST00000488279 GVQW1Q8N7I0 195 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms