RNA–Protein interactions for RNA: ENST00000487689.1

UBR3-211, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 3

Gene UBR3, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-211ENST00000487689 HIST2H3PS2Q5TEC6 136 aa2.31□□□□□ -2.04
UBR3-211ENST00000487689 HACD4Q5VWC8 232 aa2.31□□□□□ -2.04
UBR3-211ENST00000487689 TMEM236Q5W0B7 351 aa2.31□□□□□ -2.04
UBR3-211ENST00000487689 ARL9Q6T311 187 aa2.31□□□□□ -2.04
UBR3-211ENST00000487689 FBXW12Q6X9E4 464 aa2.31□□□□□ -2.04
UBR3-211ENST00000487689 DGAT2L6Q6ZPD8 337 aa2.31□□□□□ -2.04
UBR3-211ENST00000487689 CAMK2N1Q7Z7J9 78 aa2.31□□□□□ -2.04
UBR3-211ENST00000487689 TAC4Q86UU9 113 aa2.31□□□□□ -2.04
UBR3-211ENST00000487689 LRRC25Q8N386 305 aaPredicted RBP2.31□□□□□ -2.04
UBR3-211ENST00000487689 ZNF561Q8N587 486 aa2.31□□□□□ -2.04
UBR3-211ENST00000487689 ARIH2OSQ8N7S6 290 aa2.31□□□□□ -2.04
UBR3-211ENST00000487689 ACTRT1Q8TDG2 376 aa2.31□□□□□ -2.04
UBR3-211ENST00000487689 PYDC1Q8WXC3 89 aa2.31□□□□□ -2.04
UBR3-211ENST00000487689 KLK6Q92876 244 aa2.31□□□□□ -2.04
UBR3-211ENST00000487689 PPCDCQ96CD2 204 aa2.31□□□□□ -2.04
UBR3-211ENST00000487689 SNF8Q96H20 258 aa2.31□□□□□ -2.04
UBR3-211ENST00000487689 NIPSNAP1Q9BPW8 284 aa2.31□□□□□ -2.04
UBR3-211ENST00000487689 OR51E2Q9H255 320 aa2.31□□□□□ -2.04
UBR3-211ENST00000487689 SLCO1B3Q9NPD5 702 aa2.31□□□□□ -2.04
UBR3-211ENST00000487689 LHX9Q9NQ69 397 aa2.31□□□□□ -2.04
UBR3-211ENST00000487689 C8orf4Q9NR00 106 aa2.31□□□□□ -2.04
UBR3-211ENST00000487689 NEU3Q9UQ49 428 aa2.31□□□□□ -2.04
UBR3-211ENST00000487689 TRAPPC4Q9Y296 219 aa2.31□□□□□ -2.04
UBR3-211ENST00000487689 POLR1DQ9Y2S0 133 aa2.31□□□□□ -2.04
UBR3-211ENST00000487689 HEBP2Q9Y5Z4 205 aa2.31□□□□□ -2.04
UBR3-211ENST00000487689 F11RQ9Y624 299 aaKnown RBP2.31□□□□□ -2.04
UBR3-211ENST00000487689 SRRM2Q9UQ35 2752 aaKnown RBP2.31□□□□□ -2.04
UBR3-211ENST00000487689 TRIP11Q15643 1979 aa2.3□□□□□ -2.04
UBR3-211ENST00000487689 CR1P17927 2039 aa2.3□□□□□ -2.04
UBR3-211ENST00000487689 MYCBP2O75592 4640 aa2.3□□□□□ -2.04
UBR3-211ENST00000487689 IGHV3-74A0A0B4J1X5 117 aa2.3□□□□□ -2.04
UBR3-211ENST00000487689 A0A0J9YXY3 114 aa2.3□□□□□ -2.04
UBR3-211ENST00000487689 TEX50A0A1B0GTY4 177 aa2.3□□□□□ -2.04
UBR3-211ENST00000487689 A0A1B0GXF2 115 aa2.3□□□□□ -2.04
UBR3-211ENST00000487689 CLDN24A6NM45 220 aa2.3□□□□□ -2.04
UBR3-211ENST00000487689 C3orf84H3BNL1 204 aa2.3□□□□□ -2.04
UBR3-211ENST00000487689 PSMD12O00232 456 aaPredicted RBP2.3□□□□□ -2.04
UBR3-211ENST00000487689 MANBAO00462 879 aa2.3□□□□□ -2.04
UBR3-211ENST00000487689 TCF21O43680 179 aa2.3□□□□□ -2.04
UBR3-211ENST00000487689 PDCD6O75340 191 aa2.3□□□□□ -2.04
UBR3-211ENST00000487689 HLA-DPB1P04440 258 aa2.3□□□□□ -2.04
UBR3-211ENST00000487689 IL3P08700 152 aa2.3□□□□□ -2.04
UBR3-211ENST00000487689 CECR9P0C854 216 aa2.3□□□□□ -2.04
UBR3-211ENST00000487689 SPNP16150 400 aa2.3□□□□□ -2.04
UBR3-211ENST00000487689 ZNF30P17039 623 aa2.3□□□□□ -2.04
UBR3-211ENST00000487689 TAC1P20366 129 aa2.3□□□□□ -2.04
UBR3-211ENST00000487689 GABRR1P24046 479 aa2.3□□□□□ -2.04
UBR3-211ENST00000487689 TGFBR2P37173 567 aa2.3□□□□□ -2.04
UBR3-211ENST00000487689 PMELP40967 661 aa2.3□□□□□ -2.04
UBR3-211ENST00000487689 PFN3P60673 137 aa2.3□□□□□ -2.04
UBR3-211ENST00000487689 ADIGQ0VDE8 80 aa2.3□□□□□ -2.04
UBR3-211ENST00000487689 IHHQ14623 411 aa2.3□□□□□ -2.04
UBR3-211ENST00000487689 POU6F1Q14863 301 aa2.3□□□□□ -2.04
UBR3-211ENST00000487689 IRF4Q15306 451 aa2.3□□□□□ -2.04
UBR3-211ENST00000487689 SLC9A3R2Q15599 337 aa2.3□□□□□ -2.04
UBR3-211ENST00000487689 KRTAP21-2Q3LI59 83 aa2.3□□□□□ -2.04
UBR3-211ENST00000487689 C6orf99Q4VX62 202 aa2.3□□□□□ -2.04
UBR3-211ENST00000487689 ORMDL2Q53FV1 153 aa2.3□□□□□ -2.04
UBR3-211ENST00000487689 FBXW9Q5XUX1 488 aa2.3□□□□□ -2.04
UBR3-211ENST00000487689 RASSF6Q6ZTQ3 369 aa2.3□□□□□ -2.04
UBR3-211ENST00000487689 COMMD7Q86VX2 200 aa2.3□□□□□ -2.04
UBR3-211ENST00000487689 DOLPP1Q86YN1 238 aa2.3□□□□□ -2.04
UBR3-211ENST00000487689 MUC15Q8N387 334 aa2.3□□□□□ -2.04
UBR3-211ENST00000487689 TBC1D19Q8N5T2 526 aa2.3□□□□□ -2.04
UBR3-211ENST00000487689 CLDN22Q8N7P3 220 aa2.3□□□□□ -2.04
UBR3-211ENST00000487689 NEK7Q8TDX7 302 aa2.3□□□□□ -2.04
UBR3-211ENST00000487689 EEF1AKMT1Q8WVE0 214 aa2.3□□□□□ -2.04
UBR3-211ENST00000487689 DYDC1Q8WWB3 177 aa2.3□□□□□ -2.04
UBR3-211ENST00000487689 LRRC58Q96CX6 371 aa2.3□□□□□ -2.04
UBR3-211ENST00000487689 KLF6Q99612 283 aaPredicted RBP2.3□□□□□ -2.04
UBR3-211ENST00000487689 PHB2Q99623 299 aa2.3□□□□□ -2.04
UBR3-211ENST00000487689 DOK1Q99704 481 aa2.3□□□□□ -2.04
UBR3-211ENST00000487689 EBPLQ9BY08 206 aa2.3□□□□□ -2.04
UBR3-211ENST00000487689 REG4Q9BYZ8 158 aa2.3□□□□□ -2.04
UBR3-211ENST00000487689 ULBP3Q9BZM4 244 aa2.3□□□□□ -2.04
UBR3-211ENST00000487689 TSGA10Q9BZW7 698 aa2.3□□□□□ -2.04
UBR3-211ENST00000487689 SPNS1Q9H2V7 528 aa2.3□□□□□ -2.04
UBR3-211ENST00000487689 FBXL15Q9H469 300 aa2.3□□□□□ -2.04
UBR3-211ENST00000487689 UBQLN4Q9NRR5 601 aa2.3□□□□□ -2.04
UBR3-211ENST00000487689 C19orf12Q9NSK7 152 aa2.3□□□□□ -2.04
UBR3-211ENST00000487689 GID8Q9NWU2 228 aa2.3□□□□□ -2.04
UBR3-211ENST00000487689 TAS2R5Q9NYW4 299 aa2.3□□□□□ -2.04
UBR3-211ENST00000487689 GLTPQ9NZD2 209 aa2.3□□□□□ -2.04
UBR3-211ENST00000487689 ALG5Q9Y673 324 aa2.3□□□□□ -2.04
UBR3-211ENST00000487689 WSB1Q9Y6I7 421 aa2.3□□□□□ -2.04
UBR3-211ENST00000487689 PLXNB1O43157 2135 aa2.3□□□□□ -2.04
UBR3-211ENST00000487689 ALMS1Q8TCU4 4167 aa2.3□□□□□ -2.04
UBR3-211ENST00000487689 FAT2Q9NYQ8 4349 aa2.29□□□□□ -2.04
UBR3-211ENST00000487689 MED12Q93074 2177 aa2.29□□□□□ -2.04
UBR3-211ENST00000487689 SMIM26A0A096LP01 95 aa2.29□□□□□ -2.04
UBR3-211ENST00000487689 IGHV6-1A0A0B4J1U7 121 aa2.29□□□□□ -2.04
UBR3-211ENST00000487689 CENPVL3A0A0U1RRI6 287 aa2.29□□□□□ -2.04
UBR3-211ENST00000487689 PGPA6NDG6 321 aa2.29□□□□□ -2.04
UBR3-211ENST00000487689 SMIM9A6NGZ8 99 aa2.29□□□□□ -2.04
UBR3-211ENST00000487689 FAM183AA6NL82 134 aa2.29□□□□□ -2.04
UBR3-211ENST00000487689 C2orf74A8MZ97 194 aa2.29□□□□□ -2.04
UBR3-211ENST00000487689 DNASE2O00115 360 aaPredicted RBP2.29□□□□□ -2.04
UBR3-211ENST00000487689 UPK1AO00322 258 aa2.29□□□□□ -2.04
UBR3-211ENST00000487689 MFNGO00587 321 aa2.29□□□□□ -2.04
UBR3-211ENST00000487689 SLC37A4O43826 429 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms