RNA–Protein interactions for RNA: ENST00000485592.5

SMARCD3-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 820 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-211ENST00000485592 VMA21Q3ZAQ7 101 aa10.39□□□□□ -0.75
SMARCD3-211ENST00000485592 FAM223AQ8IWN6 122 aa10.39□□□□□ -0.75
SMARCD3-211ENST00000485592 DEFB125Q8N687 156 aa10.39□□□□□ -0.75
SMARCD3-211ENST00000485592 ADAD2Q8NCV1 583 aaKnown RBP10.39□□□□□ -0.75
SMARCD3-211ENST00000485592 SDHAF2Q9NX18 166 aa10.39□□□□□ -0.75
SMARCD3-211ENST00000485592 IGKV1-6A0A0C4DH72 117 aa10.38□□□□□ -0.75
SMARCD3-211ENST00000485592 RBMY1BA6NDE4 496 aaKnown RBP10.38□□□□□ -0.75
SMARCD3-211ENST00000485592 RBMY1EA6NEQ0 496 aaKnown RBP10.38□□□□□ -0.75
SMARCD3-211ENST00000485592 NOTOA8MTQ0 251 aa10.38□□□□□ -0.75
SMARCD3-211ENST00000485592 OR11H12B2RN74 326 aa10.38□□□□□ -0.75
SMARCD3-211ENST00000485592 BMPR1BO00238 502 aa10.38□□□□□ -0.75
SMARCD3-211ENST00000485592 RBMY1DP0C7P1 496 aaKnown RBP10.38□□□□□ -0.75
SMARCD3-211ENST00000485592 PSMD7P51665 324 aa10.38□□□□□ -0.75
SMARCD3-211ENST00000485592 TMEM50BP56557 158 aa10.38□□□□□ -0.75
SMARCD3-211ENST00000485592 RHOGP84095 191 aa10.38□□□□□ -0.75
SMARCD3-211ENST00000485592 ATP5G2Q06055 141 aa10.38□□□□□ -0.75
SMARCD3-211ENST00000485592 GUCA2BQ16661 112 aa10.38□□□□□ -0.75
SMARCD3-211ENST00000485592 TMEM177Q53S58 311 aa10.38□□□□□ -0.75
SMARCD3-211ENST00000485592 PLAC9Q5JTB6 97 aa10.38□□□□□ -0.75
SMARCD3-211ENST00000485592 FAM209BQ5JX69 171 aa10.38□□□□□ -0.75
SMARCD3-211ENST00000485592 SFXN4Q6P4A7 337 aa10.38□□□□□ -0.75
SMARCD3-211ENST00000485592 OR4A4PQ8NGN8 299 aa10.38□□□□□ -0.75
SMARCD3-211ENST00000485592 OR13F1Q8NGS4 319 aa10.38□□□□□ -0.75
SMARCD3-211ENST00000485592 SRSF12Q8WXF0 261 aaKnown RBP10.38□□□□□ -0.75
SMARCD3-211ENST00000485592 ACOT12Q8WYK0 555 aa10.38□□□□□ -0.75
SMARCD3-211ENST00000485592 ARHGAP5-AS1Q96IT6 56 aa10.38□□□□□ -0.75
SMARCD3-211ENST00000485592 PECRQ9BY49 303 aa10.38□□□□□ -0.75
SMARCD3-211ENST00000485592 ZNF230Q9UIE0 474 aaPredicted RBP10.38□□□□□ -0.75
SMARCD3-211ENST00000485592 RBM7Q9Y580 266 aaKnown RBP10.38□□□□□ -0.75
SMARCD3-211ENST00000485592 BET1O15155 118 aa10.37□□□□□ -0.75
SMARCD3-211ENST00000485592 CREBL2O60519 120 aaPredicted RBP10.37□□□□□ -0.75
SMARCD3-211ENST00000485592 UBE2KP61086 200 aa10.37□□□□□ -0.75
SMARCD3-211ENST00000485592 TPRA1Q86W33 373 aa10.37□□□□□ -0.75
SMARCD3-211ENST00000485592 TEX45Q8NA69 505 aa10.37□□□□□ -0.75
SMARCD3-211ENST00000485592 OR10J5Q8NHC4 309 aa10.37□□□□□ -0.75
SMARCD3-211ENST00000485592 KCTD12Q96CX2 325 aaKnown RBP10.37□□□□□ -0.75
SMARCD3-211ENST00000485592 FUNDC2Q9BWH2 189 aa10.37□□□□□ -0.75
SMARCD3-211ENST00000485592 WFDC10AQ9H1F0 79 aa10.37□□□□□ -0.75
SMARCD3-211ENST00000485592 VCX3AQ9NNX9 186 aa10.37□□□□□ -0.75
SMARCD3-211ENST00000485592 AKIP1Q9NQ31 210 aa10.37□□□□□ -0.75
SMARCD3-211ENST00000485592 KCNK7Q9Y2U2 307 aa10.37□□□□□ -0.75
SMARCD3-211ENST00000485592 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.36□□□□□ -0.75
SMARCD3-211ENST00000485592 SRRM4A7MD48 611 aaKnown RBP10.36□□□□□ -0.75
SMARCD3-211ENST00000485592 ZNF785A8K8V0 405 aa10.36□□□□□ -0.75
SMARCD3-211ENST00000485592 RAB27BO00194 218 aa10.36□□□□□ -0.75
SMARCD3-211ENST00000485592 FABP7O15540 132 aa10.36□□□□□ -0.75
SMARCD3-211ENST00000485592 RBMXL2O75526 392 aaKnown RBP10.36□□□□□ -0.75
SMARCD3-211ENST00000485592 ACTL6BO94805 426 aa10.36□□□□□ -0.75
SMARCD3-211ENST00000485592 CD3GP09693 182 aa10.36□□□□□ -0.75
SMARCD3-211ENST00000485592 RANBP1P43487 201 aa10.36□□□□□ -0.75
SMARCD3-211ENST00000485592 MXD1Q05195 221 aa10.36□□□□□ -0.75
SMARCD3-211ENST00000485592 PRSS8Q16651 343 aa10.36□□□□□ -0.75
SMARCD3-211ENST00000485592 DEFB114Q30KQ6 69 aa10.36□□□□□ -0.75
SMARCD3-211ENST00000485592 SLC16A13Q7RTY0 426 aa10.36□□□□□ -0.75
SMARCD3-211ENST00000485592 OR56B1Q8NGI3 324 aa10.36□□□□□ -0.75
SMARCD3-211ENST00000485592 LGALS14Q8TCE9 139 aa10.36□□□□□ -0.75
SMARCD3-211ENST00000485592 LINC00476Q8WZB0 136 aa10.36□□□□□ -0.75
SMARCD3-211ENST00000485592 ADTRPQ96IZ2 230 aa10.36□□□□□ -0.75
SMARCD3-211ENST00000485592 CABLES2Q9BTV7 478 aa10.36□□□□□ -0.75
SMARCD3-211ENST00000485592 ZC4H2Q9NQZ6 224 aa10.36□□□□□ -0.75
SMARCD3-211ENST00000485592 TECRQ9NZ01 308 aaKnown RBP10.36□□□□□ -0.75
SMARCD3-211ENST00000485592 ALMS1Q8TCU4 4167 aa10.35□□□□□ -0.75
SMARCD3-211ENST00000485592 TRBV9A0A0B4J1U6 114 aa10.35□□□□□ -0.75
SMARCD3-211ENST00000485592 C2orf70A6NJV1 201 aa10.35□□□□□ -0.75
SMARCD3-211ENST00000485592 CRYZL1O95825 349 aa10.35□□□□□ -0.75
SMARCD3-211ENST00000485592 LY6G6CO95867 125 aa10.35□□□□□ -0.75
SMARCD3-211ENST00000485592 PRH1P02810 166 aa10.35□□□□□ -0.75
SMARCD3-211ENST00000485592 RAB6AP20340 208 aa10.35□□□□□ -0.75
SMARCD3-211ENST00000485592 KIR2DS2P43631 304 aa10.35□□□□□ -0.75
SMARCD3-211ENST00000485592 ALDH3B2P48448 385 aa10.35□□□□□ -0.75
SMARCD3-211ENST00000485592 NCS1P62166 190 aa10.35□□□□□ -0.75
SMARCD3-211ENST00000485592 LSM3P62310 102 aaKnown RBP10.35□□□□□ -0.75
SMARCD3-211ENST00000485592 MRGPRG-AS1Q2M3A8 158 aa10.35□□□□□ -0.75
SMARCD3-211ENST00000485592 TIMM50Q3ZCQ8 353 aa10.35□□□□□ -0.75
SMARCD3-211ENST00000485592 IDO2Q6ZQW0 420 aa10.35□□□□□ -0.75
SMARCD3-211ENST00000485592 NECAP1Q8NC96 275 aa10.35□□□□□ -0.75
SMARCD3-211ENST00000485592 SPIN2AQ99865 258 aa10.35□□□□□ -0.75
SMARCD3-211ENST00000485592 SPIN2BQ9BPZ2 258 aa10.35□□□□□ -0.75
SMARCD3-211ENST00000485592 GINS4Q9BRT9 223 aa10.35□□□□□ -0.75
SMARCD3-211ENST00000485592 NAA50Q9GZZ1 169 aaKnown RBP10.35□□□□□ -0.75
SMARCD3-211ENST00000485592 DAPK2Q9UIK4 370 aa10.35□□□□□ -0.75
SMARCD3-211ENST00000485592 RAB22AQ9UL26 194 aa10.35□□□□□ -0.75
SMARCD3-211ENST00000485592 TRBV6-7A0A0A0MS04 114 aa10.34□□□□□ -0.75
SMARCD3-211ENST00000485592 MFNGO00587 321 aa10.34□□□□□ -0.75
SMARCD3-211ENST00000485592 GGCTO75223 188 aaKnown RBP10.34□□□□□ -0.75
SMARCD3-211ENST00000485592 DIRAS3O95661 229 aa10.34□□□□□ -0.75
SMARCD3-211ENST00000485592 FOLR2P14207 255 aa10.34□□□□□ -0.75
SMARCD3-211ENST00000485592 ZNF45Q02386 682 aa10.34□□□□□ -0.75
SMARCD3-211ENST00000485592 C15orf32Q32M92 178 aa10.34□□□□□ -0.75
SMARCD3-211ENST00000485592 IGSF11Q5DX21 431 aa10.34□□□□□ -0.75
SMARCD3-211ENST00000485592 SLC25A42Q86VD7 318 aa10.34□□□□□ -0.75
SMARCD3-211ENST00000485592 OR5H6Q8NGV6 325 aa10.34□□□□□ -0.75
SMARCD3-211ENST00000485592 OSR1Q8TAX0 266 aaPredicted RBP10.34□□□□□ -0.75
SMARCD3-211ENST00000485592 SLC25A38Q96DW6 304 aa10.34□□□□□ -0.75
SMARCD3-211ENST00000485592 WDR89Q96FK6 387 aaPredicted RBP10.34□□□□□ -0.75
SMARCD3-211ENST00000485592 C5orf30Q96GV9 206 aa10.34□□□□□ -0.75
SMARCD3-211ENST00000485592 MRPS26Q9BYN8 205 aaKnown RBP10.34□□□□□ -0.75
SMARCD3-211ENST00000485592 PPP5D1E7EU14 171 aa10.33□□□□□ -0.76
SMARCD3-211ENST00000485592 LGALS9O00182 355 aa10.33□□□□□ -0.76
SMARCD3-211ENST00000485592 OR2J3O76001 311 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms